FFCP PHASE1:Hg19::chr6:31940091..31940177,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31940091..31940177,+
|short_description=p1@STK19
|description=CAGE_peak_1_at_STK19_5end
|association_with_transcript=0bp_to_ENST00000463823,ENST00000466336...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8859 | |EntrezGene=8859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11398 | |HGNC=11398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463823,ENST00000466336,ENST00000473983,ENST00000478486,ENST00000483801,ENST00000519179_5end | |||
|cluster_id=chr6:31940091..31940177,+ | |||
|description=CAGE_peak_1_at_STK19_5end | |||
|id=chr6:31940091..31940177,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.14e-12!42;CL:0000860!7.41e-11!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-10;33!CL:0002057;1.80e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.14e-12,42;CL:0002057,3.14e-12,42;CL:0000473,1.04e-08,48;CL:0000234,1.04e-08,48;CL:0000766,5.64e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.15e-08!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.58e-07,203;UBERON:0000923,4.56e-07,560;UBERON:0010316,4.56e-07,560;UBERON:0005291,4.56e-07,560;UBERON:0006598,4.56e-07,560;UBERON:0010317,4.56e-07,560;UBERON:0002532,4.56e-07,560;UBERON:0002050,5.41e-07,564 | |||
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| ||
|short_description=p1@STK19 | |||
}} | }} |
Latest revision as of 01:23, 18 September 2015
Short description: | p1@STK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STK19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463823, ENST00000466336, ENST00000473983, ENST00000478486, ENST00000483801, ENST00000519179_5end |
EntrezGene: | STK19 |
HGNC: | 11398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.14e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-12 | 42 |
defensive cell | 1.04e-08 | 48 |
phagocyte | 1.04e-08 | 48 |
myeloid leukocyte | 5.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.58e-07 | 203 |
germ layer | 4.56e-07 | 560 |
germ layer / neural crest | 4.56e-07 | 560 |
embryonic tissue | 4.56e-07 | 560 |
presumptive structure | 4.56e-07 | 560 |
germ layer / neural crest derived structure | 4.56e-07 | 560 |
epiblast (generic) | 4.56e-07 | 560 |
embryonic structure | 5.41e-07 | 564 |