FFCP PHASE1:Hg19::chr18:47339882..47339910,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=B3KNP8,P42765 | |UniProt=B3KNP8,P42765 | ||
|association_with_transcript=340bp_to_NM_006111,uc002ldw.3_5end | |association_with_transcript=340bp_to_NM_006111,uc002ldw.3_5end | ||
|cluster_id=chr18:47339882..47339910,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_ACAA2_5end | |description=CAGE_peak_1_at_ACAA2_5end |
Latest revision as of 17:50, 19 September 2015
Short description: | p1@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACAA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 340bp_to_NM_006111, uc002ldw.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | B3KNP8P42765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ACAA2 |
---|
0
200
400
600
800
1000
1200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.08e-09 | 15 |
stem cell | 1.35e-07 | 441 |
multi fate stem cell | 1.64e-07 | 427 |
somatic stem cell | 3.01e-07 | 433 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.34e-08 | 167 |
primary circulatory organ | 1.35e-07 | 27 |
muscle tissue | 2.70e-07 | 64 |
musculature | 2.70e-07 | 64 |
musculature of body | 2.70e-07 | 64 |
somite | 4.44e-07 | 71 |
presomitic mesoderm | 4.44e-07 | 71 |
presumptive segmental plate | 4.44e-07 | 71 |
dermomyotome | 4.44e-07 | 71 |
trunk paraxial mesoderm | 4.44e-07 | 71 |
Showing 1 to 10 of 17 entries