FFCP PHASE1:Hg19::chr7:143080302..143080323,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:143080302..143080323,+
|short_description=p12@ZYX
|description=CAGE_peak_12_at_ZYX_5end
|association_with_transcript=209bp_to_ENST00000446634_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7791 | |EntrezGene=7791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13200 | |HGNC=13200 | ||
|TSSclassifier=strong | |||
|UniProt=C9JJK5 | |UniProt=C9JJK5 | ||
|association_with_transcript=209bp_to_ENST00000446634_5end | |||
|cluster_id=chr7:143080302..143080323,+ | |||
|description=CAGE_peak_12_at_ZYX_5end | |||
|id=chr7:143080302..143080323,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.79e-14!42;CL:0000860!6.60e-12!45;CL:0002194!1.22e-11!63;CL:0000576!1.22e-11!63;CL:0000040!1.22e-11!63;CL:0000559!1.22e-11!63;CL:0000766!3.03e-11!76;CL:0000144!5.29e-11!625;CL:0002009!5.87e-11!65;CL:0002371!6.64e-11!591;CL:0000048!1.85e-10!430;CL:0000723!5.30e-10!436;CL:0000839!6.45e-10!70;CL:0000557!8.12e-10!71;CL:0000034!2.35e-09!444;CL:0000222!7.51e-09!119;CL:0000548!1.71e-07!679;CL:0000004!1.71e-07!679;CL:0000255!1.71e-07!679;CL:0000183!1.92e-07!59;CL:0000012!5.89e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-14;33!CL:0002057;1.04e-14;33!CL:0000473;9.34e-13;39!CL:0000234;9.34e-13;39!CL:0000576;1.93e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.99e-15,48;CL:0000234,1.99e-15,48;CL:0000860,1.14e-14,42;CL:0002057,1.14e-14,42;CL:0000766,5.30e-12,72;CL:0002194,1.01e-11,59;CL:0000576,1.01e-11,59;CL:0000040,1.01e-11,59;CL:0000559,1.01e-11,59;CL:0002009,4.40e-11,61;CL:0000048,1.88e-10,427;CL:0000723,2.10e-10,433;CL:0000034,9.58e-10,441;CL:0000839,1.16e-09,66;CL:0000557,2.09e-09,67;CL:0002320,4.51e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.93e-14!216;UBERON:0002204!1.53e-13!167;UBERON:0000926!6.23e-13!448;UBERON:0004120!6.23e-13!448;UBERON:0006603!6.23e-13!448;UBERON:0002371!8.80e-10!80;UBERON:0004765!1.10e-09!101;UBERON:0001434!1.10e-09!101;UBERON:0001474!7.57e-09!86;UBERON:0002405!8.85e-08!115;UBERON:0004872!1.94e-07!84;UBERON:0002390!8.33e-07!102;UBERON:0003061!8.33e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.51e-08;6!UBERON:0002358;1.51e-08;6!UBERON:0003684;1.51e-08;6!UBERON:0001178;1.51e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.91e-14,315;UBERON:0004120,1.91e-14,315;UBERON:0006603,1.91e-14,315;UBERON:0003081,3.00e-12,203;UBERON:0002204,1.79e-10,167;UBERON:0002371,6.54e-09,76;UBERON:0001474,2.55e-08,82;UBERON:0003688,6.26e-08,6;UBERON:0002358,6.26e-08,6;UBERON:0003684,6.26e-08,6;UBERON:0001178,6.26e-08,6;UBERON:0001637,9.60e-08,42;UBERON:0003509,9.60e-08,42;UBERON:0004572,9.60e-08,42;UBERON:0004765,1.58e-07,90;UBERON:0001434,2.62e-07,100;UBERON:0002405,3.89e-07,93;UBERON:0007500,7.32e-07,59;UBERON:0001981,7.32e-07,59;UBERON:0004537,7.32e-07,59;UBERON:0006965,7.32e-07,59 | |||
|phase1_expression=3.45188920614058,2.14100523890983,3.38290569830331,1.0007329835313,2.23480547213644,0,7.59899634504932,1.89515962028049,1.56711376919903,1.47440361900905,2.79120467188971,0.436882744260345,0.527533956456907,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,0,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0.464448369948228,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0.293600439334847,0,0.601633342410425,0.868043482863407,1.56740831967947,0.32389366601898,0.515151135268373,1.45398238779565,2.26725566213286,2.18325655069035,0.929716147622738,0.822335776043652,1.54853185447552,1.1507695692886,1.7931249457037,1.41889337933151,1.03423704220986,3.22742341791913,1.35426486594342,2.63539275359647,2.45615535052061,2.47195832889593,5.50951006267625,5.45579346029359,4.47535988059329,0.989553900560148,1.59570926097305,0.852449501065388,2.32167390902867,0.56738522469114,0,0.75374599577023,2.60741459210101,1.95469960234605,1.21079900526674,0.736555271975129,0.632924774881769,2.11255286311942,1.4882300997553,1.04829322754188,0.786300418025466,1.50176892841506,0.964353520182481,0.570025487482497,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.891283655081389,0.294605907474837,0,0.541607727530031,0.25618263945135,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0.383587685530591,1.0843174571537,2.00535164254356,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,0,0.741568885568859,0.649094787309367,0.174129737299267,0.797747763113191,0,0,0,1.59009925893364,0,0,0,0.419499436209906,1.92582629358047,1.67195973229448,0.775250277507987,0.35576626268671,1.33888245105868,1.20848795132744,0.760272105718513,1.70843440283719,0.367663080345869,2.43042584364528,0.267899184852239,0,0.225222960966644,0,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0.496971951695318,0.886413581652058,0,0.286836620748814,1.77334191099179,0.560677600142307,4.2699598291882,0.74000264525148,0.311211035399766,0.404132016209064,0.163461903113459,0.605429710579726,0,0,0.624320153660641,0,0.448346041655403,0.23486899728753,0.323745888736263,0,0,0.491337269247072,0.309977343527296,2.37600571456411,0.494533858557114,0,2.15585442544872,0.336672227908132,0.250237039743928,0,2.19488810440419,3.0648779579902,0.751190294532984,0.340296549480063,0,0,0.211931901159562,0,0.515262646192195,0.772921620136887,0.18611685633159,0.675105328965065,0.584622030967192,0.504867548488229,0.828449087780694,0.80823028409406,0.355009592516614,0.403008392910561,0.508681776931463,0.57978255948989,1.90922284413584,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0,0,3.85944562915731,4.14404764057442,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0,0.196221465125346,0,1.4763109092493,2.80483547606892,0.8231480226628,2.94017422771084,0,2.94848165003288,0,0,0.368965315629341,0.857839051492628,1.42675371031213,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0,0.117408694235822,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0.738651018262192,0.234004265139238,0.743155811443641,0.93733833986777,0.671928512795438,0.708875486211932,0.179117045405697,0.290633938513962,2.30029607499127,0,0.704387472105808,0.414656231081544,0.576479813667846,0,0,0,1.17217447210047,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,3.57656445851882,0,1.86156681609409,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,1.20575750823834,0,0.799783929456456,1.2162378064119,1.00451418286425,2.10833939483032,0.718874566474748,2.29723871668228,0,0.144781306667579,0.821905290201534,0.358121926479791,0.112085143993527,0.197030760201927,0.646882724578552,0.256686072559497,1.27047312111232,0,0.773288812777695,0.167516265334349,0,2.24702107184155,14.9580729602012,3.31532410748828,0.24538298343828,1.50051156317903,0.271265023699736,0.831883446123229,0.356857977594324,0.315404830067869,0.234282829985426,2.10662269809403,9.09630016223939,7.24311499047534,0,1.29058417979192,0.868836144680828,1.56640925970192,1.02943027143257,0.206768026122887,0.647142602455851,0.213455115606889,1.5156378572313,3.32870879020994,0.604780586659361,3.2254015016441,0.153461973288062,1.12264037773229,3.33161788064823,1.02341449813341,1.28683136914886,0,0.308419387605311,1.9531789784444,0.574890092096664,0.519254429183621,0.581051892299796,1.32945394550784,6.21570057940183,0.736647911487171,0.34444334449382,0.546273504020151,3.93373244878272,0,0,1.56869953835371,0,0.211103257785751,6.8240030442538,0.850468526382578,0,4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|phase1_expression=3.45188920614058,2.14100523890983,3.38290569830331,1.0007329835313,2.23480547213644,0,7.59899634504932,1.89515962028049,1.56711376919903,1.47440361900905,2.79120467188971,0.436882744260345,0.527533956456907,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,0,1.46379839637152,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0.464448369948228,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0.293600439334847,0,0.601633342410425,0.868043482863407,1.56740831967947,0.32389366601898,0.515151135268373,1.45398238779565,2.26725566213286,2.18325655069035,0.929716147622738,0.822335776043652,1.54853185447552,1.1507695692886,1.7931249457037,1.41889337933151,1.03423704220986,3.22742341791913,1.35426486594342,2.63539275359647,2.45615535052061,2.47195832889593,5.50951006267625,5.45579346029359,4.47535988059329,0.989553900560148,1.59570926097305,0.852449501065388,2.32167390902867,0.56738522469114,0,0.75374599577023,2.60741459210101,1.95469960234605,1.21079900526674,0.736555271975129,0.632924774881769,2.11255286311942,1.4882300997553,1.04829322754188,0.786300418025466,1.50176892841506,0.964353520182481,0.570025487482497,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.891283655081389,0.294605907474837,0,0.541607727530031,0.25618263945135,0.520237390239513,0.328875809207352,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0.383587685530591,1.0843174571537,2.00535164254356,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,0,0.741568885568859,0.649094787309367,0.174129737299267,0.797747763113191,0,0,0,1.59009925893364,0,0,0,0.419499436209906,1.92582629358047,1.67195973229448,0.775250277507987,0.35576626268671,1.33888245105868,1.20848795132744,0.760272105718513,1.70843440283719,0.367663080345869,2.43042584364528,0.267899184852239,0,0.225222960966644,0,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0.496971951695318,0.886413581652058,0,0.286836620748814,1.77334191099179,0.560677600142307,4.2699598291882,0.74000264525148,0.311211035399766,0.404132016209064,0.163461903113459,0.605429710579726,0,0,0.624320153660641,0,0.448346041655403,0.23486899728753,0.323745888736263,0,0,0.491337269247072,0.309977343527296,2.37600571456411,0.494533858557114,0,2.15585442544872,0.336672227908132,0.250237039743928,0,2.19488810440419,3.0648779579902,0.751190294532984,0.340296549480063,0,0,0.211931901159562,0,0.515262646192195,0.772921620136887,0.18611685633159,0.675105328965065,0.584622030967192,0.504867548488229,0.828449087780694,0.80823028409406,0.355009592516614,0.403008392910561,0.508681776931463,0.57978255948989,1.90922284413584,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0,0,3.85944562915731,4.14404764057442,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0,0.196221465125346,0,1.4763109092493,2.80483547606892,0.8231480226628,2.94017422771084,0,2.94848165003288,0,0,0.368965315629341,0.857839051492628,1.42675371031213,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0,0.117408694235822,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0.738651018262192,0.234004265139238,0.743155811443641,0.93733833986777,0.671928512795438,0.708875486211932,0.179117045405697,0.290633938513962,2.30029607499127,0,0.704387472105808,0.414656231081544,0.576479813667846,0,0,0,1.17217447210047,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,3.57656445851882,0,1.86156681609409,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,1.20575750823834,0,0.799783929456456,1.2162378064119,1.00451418286425,2.10833939483032,0.718874566474748,2.29723871668228,0,0.144781306667579,0.821905290201534,0.358121926479791,0.112085143993527,0.197030760201927,0.646882724578552,0.256686072559497,1.27047312111232,0,0.773288812777695,0.167516265334349,0,2.24702107184155,14.9580729602012,3.31532410748828,0.24538298343828,1.50051156317903,0.271265023699736,0.831883446123229,0.356857977594324,0.315404830067869,0.234282829985426,2.10662269809403,9.09630016223939,7.24311499047534,0,1.29058417979192,0.868836144680828,1.56640925970192,1.02943027143257,0.206768026122887,0.647142602455851,0.213455115606889,1.5156378572313,3.32870879020994,0.604780586659361,3.2254015016441,0.153461973288062,1.12264037773229,3.33161788064823,1.02341449813341,1.28683136914886,0,0.308419387605311,1.9531789784444,0.574890092096664,0.519254429183621,0.581051892299796,1.32945394550784,6.21570057940183,0.736647911487171,0.34444334449382,0.546273504020151,3.93373244878272,0,0,1.56869953835371,0,0.211103257785751,6.8240030442538,0.850468526382578,0,4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| ||
|short_description=p12@ZYX | |||
}} | }} |
Latest revision as of 23:24, 16 September 2015
Short description: | p12@ZYX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ZYX_5end |
Coexpression cluster: | NA |
Association with transcript: | 209bp_to_ENST00000446634_5end |
EntrezGene: | ZYX |
HGNC: | 13200 |
UniProt: | C9JJK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.99e-15 | 48 |
phagocyte | 1.99e-15 | 48 |
classical monocyte | 1.14e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-14 | 42 |
myeloid leukocyte | 5.30e-12 | 72 |
monopoietic cell | 1.01e-11 | 59 |
monocyte | 1.01e-11 | 59 |
monoblast | 1.01e-11 | 59 |
promonocyte | 1.01e-11 | 59 |
macrophage dendritic cell progenitor | 4.40e-11 | 61 |
multi fate stem cell | 1.88e-10 | 427 |
somatic stem cell | 2.10e-10 | 433 |
stem cell | 9.58e-10 | 441 |
myeloid lineage restricted progenitor cell | 1.16e-09 | 66 |
granulocyte monocyte progenitor cell | 2.09e-09 | 67 |
connective tissue cell | 4.51e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.91e-14 | 315 |
mesoderm-derived structure | 1.91e-14 | 315 |
presumptive mesoderm | 1.91e-14 | 315 |
lateral plate mesoderm | 3.00e-12 | 203 |
musculoskeletal system | 1.79e-10 | 167 |
bone marrow | 6.54e-09 | 76 |
bone element | 2.55e-08 | 82 |
omentum | 6.26e-08 | 6 |
peritoneum | 6.26e-08 | 6 |
abdominal cavity | 6.26e-08 | 6 |
visceral peritoneum | 6.26e-08 | 6 |
artery | 9.60e-08 | 42 |
arterial blood vessel | 9.60e-08 | 42 |
arterial system | 9.60e-08 | 42 |
skeletal element | 1.58e-07 | 90 |
skeletal system | 2.62e-07 | 100 |
immune system | 3.89e-07 | 93 |
epithelial tube open at both ends | 7.32e-07 | 59 |
blood vessel | 7.32e-07 | 59 |
blood vasculature | 7.32e-07 | 59 |
vascular cord | 7.32e-07 | 59 |