FFCP PHASE1:Hg19::chr7:4169345..4169356,+: Difference between revisions
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|id=chr7:4169345..4169356,+
|short_description=p8@SDK1
|description=CAGE_peak_8_at_SDK1_5end
|association_with_transcript=28bp_to_ENST00000476701,NR_027816,uc003smy...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221935 | |EntrezGene=221935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19307 | |HGNC=19307 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000476701,NR_027816,uc003smy.2_5end | |||
|cluster_id=chr7:4169345..4169356,+ | |||
|description=CAGE_peak_8_at_SDK1_5end | |||
|id=chr7:4169345..4169356,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.05e-23!5;CL:0000457!2.05e-23!5;CL:0002191!2.05e-23!5;CL:0000097!2.05e-23!5;CL:0000831!2.05e-23!5;CL:0002028!2.05e-23!5;CL:0000163!2.68e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.56e-40;5!CL:0000163;1.05e-22;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.33e-40,5;CL:0002028,3.33e-40,5;CL:0000163,1.01e-22,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.03e-10;10!UBERON:0005564;9.03e-10;10!UBERON:0003056;1.04e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.48e-38!3;UBERON:0005290!4.48e-38!3;UBERON:0010096!4.48e-38!3;UBERON:0002298!1.01e-14!8;UBERON:0000473!1.16e-14!8;UBERON:0000998!1.42e-13!1;UBERON:0006868!1.42e-13!1;UBERON:0002336!1.61e-13!1;UBERON:0001018!1.61e-13!1;UBERON:0002473!1.61e-13!1;UBERON:0005340!1.61e-13!1;UBERON:0002316!1.61e-13!1;UBERON:0003544!1.61e-13!1;UBERON:0001020!1.61e-13!1;UBERON:0005970!1.61e-13!1;UBERON:0002437!1.61e-13!1;UBERON:0003135!7.99e-11!11;UBERON:0004733!5.22e-10!12;UBERON:0002028!5.22e-10!12;UBERON:0007277!5.22e-10!12;UBERON:0007023!1.31e-09!115;UBERON:0004732!2.80e-09!13;UBERON:0003076!4.12e-08!15;UBERON:0003057!4.12e-08!15;UBERON:0002360!1.64e-07!2;UBERON:0000094!1.64e-07!2;UBERON:0007645!1.64e-07!2;UBERON:0005162!2.12e-07!2;UBERON:0000122!2.12e-07!2;UBERON:0000073!2.22e-07!94;UBERON:0001016!2.22e-07!94;UBERON:0000007!2.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.48e-30;3!UBERON:0005290;2.48e-30;3!UBERON:0002298;1.01e-15;6!UBERON:0000473;5.67e-12;8!UBERON:0003135;5.75e-09;11!UBERON:0004733;2.42e-08;12!UBERON:0002028;2.42e-08;12!UBERON:0004732;9.04e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.67e-30,3;UBERON:0005290,2.67e-30,3;UBERON:0010096,2.67e-30,3;UBERON:0002298,1.05e-15,6;UBERON:0000473,5.52e-12,8;UBERON:0003135,5.64e-09,11;UBERON:0004733,2.46e-08,12;UBERON:0002028,2.46e-08,12;UBERON:0007277,2.46e-08,12;UBERON:0004732,9.20e-08,13;UBERON:0003076,7.63e-07,15;UBERON:0003057,7.63e-07,15 | |||
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|short_description=p8@SDK1 | |||
}} | }} |
Latest revision as of 14:09, 18 September 2015
Short description: | p8@SDK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SDK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000476701, NR_027816, uc003smy.2_5end |
EntrezGene: | SDK1 |
HGNC: | 19307 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.33e-40 | 5 |
basophil mast progenitor cell | 3.33e-40 | 5 |
endocrine cell | 1.01e-22 | 9 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.67e-30 | 3 |
myelencephalon | 2.67e-30 | 3 |
future myelencephalon | 2.67e-30 | 3 |
brainstem | 1.05e-15 | 6 |
testis | 5.52e-12 | 8 |
male reproductive organ | 5.64e-09 | 11 |
segmental subdivision of hindbrain | 2.46e-08 | 12 |
hindbrain | 2.46e-08 | 12 |
presumptive hindbrain | 2.46e-08 | 12 |
segmental subdivision of nervous system | 9.20e-08 | 13 |
posterior neural tube | 7.63e-07 | 15 |
chordal neural plate | 7.63e-07 | 15 |