FFCP PHASE1:Hg19::chr7:8302207..8302231,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:8302207..8302231,-
|short_description=p3@ICA1
|description=CAGE_peak_3_at_ICA1_5end
|association_with_transcript=10bp_to_ENST00000407906_5end
|EntrezGene=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3382 | |EntrezGene=3382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5343 | |HGNC=5343 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENI6 | |UniProt=E7ENI6 | ||
|association_with_transcript=10bp_to_ENST00000407906_5end | |||
|cluster_id=chr7:8302207..8302231,- | |||
|description=CAGE_peak_3_at_ICA1_5end | |||
|id=chr7:8302207..8302231,- | |||
|ontology_enrichment_celltype=CL:0000066!2.69e-08!254;CL:0000039!6.43e-08!7;CL:0000586!6.43e-08!7;CL:0002076!1.34e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.68e-09;7!CL:0000586;1.68e-09;7!CL:0002231;3.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.00e-09,7;CL:0000586,2.00e-09,7;CL:0000066,2.14e-08,253;CL:0002231,4.32e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.06e-09;10!UBERON:0005564;5.06e-09;10 | |||
|ontology_enrichment_disease=DOID:305!1.07e-14!106;DOID:0050687!4.55e-11!143;DOID:299!5.26e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.65e-18;25!DOID:5093;1.26e-11;4!DOID:1612;1.26e-11;4!DOID:305;2.11e-09;106!DOID:3119;8.39e-09;14!DOID:0050615;1.40e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.44e-20,106;DOID:299,2.76e-18,25;DOID:0050687,4.34e-17,143;DOID:5093,1.34e-11,4;DOID:1612,1.34e-11,4;DOID:3119,5.88e-09,14;DOID:162,9.61e-09,235;DOID:14566,2.31e-08,239;DOID:0050615,1.78e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.35e-23!115;UBERON:0001049!1.20e-13!57;UBERON:0005068!1.20e-13!57;UBERON:0006241!1.20e-13!57;UBERON:0007135!1.20e-13!57;UBERON:0002616!8.19e-13!59;UBERON:0004119!6.13e-12!169;UBERON:0000925!6.13e-12!169;UBERON:0006595!6.13e-12!169;UBERON:0003080!6.49e-12!42;UBERON:0004921!7.89e-12!129;UBERON:0004185!7.89e-12!129;UBERON:0000464!1.53e-11!104;UBERON:0002780!2.72e-11!41;UBERON:0001890!2.72e-11!41;UBERON:0006240!2.72e-11!41;UBERON:0001007!3.34e-11!155;UBERON:0001555!3.34e-11!155;UBERON:0007026!3.34e-11!155;UBERON:0002020!4.05e-11!34;UBERON:0003528!4.05e-11!34;UBERON:0001869!4.19e-11!32;UBERON:0001893!6.45e-11!34;UBERON:0000481!1.48e-10!347;UBERON:0000062!2.27e-10!511;UBERON:0002791!2.70e-10!33;UBERON:0000955!9.43e-10!69;UBERON:0006238!9.43e-10!69;UBERON:0000466!1.25e-09!126;UBERON:0000077!2.64e-09!130;UBERON:0003135!2.81e-09!11;UBERON:0001017!8.40e-09!82;UBERON:0003101!1.61e-08!22;UBERON:0000079!1.61e-08!22;UBERON:0000073!1.64e-08!94;UBERON:0001016!1.64e-08!94;UBERON:0000064!1.69e-08!219;UBERON:0005743!1.79e-08!86;UBERON:0000922!1.85e-08!612;UBERON:0005153!2.54e-08!37;UBERON:0004111!3.04e-08!241;UBERON:0005409!4.68e-08!35;UBERON:0001950!5.43e-08!20;UBERON:0002619!6.63e-08!22;UBERON:0000468!1.08e-07!659;UBERON:0002048!1.98e-07!22;UBERON:0000117!1.98e-07!22;UBERON:0000171!1.98e-07!22;UBERON:0000170!1.98e-07!22;UBERON:0005597!1.98e-07!22;UBERON:0000118!1.98e-07!22;UBERON:0000160!2.72e-07!27;UBERON:0000475!3.75e-07!365;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0005178!4.25e-07!34;UBERON:0002224!4.25e-07!34;UBERON:0000473!4.96e-07!8;UBERON:0000033!6.70e-07!123;UBERON:0003056!6.71e-07!61;UBERON:0000153!6.90e-07!129;UBERON:0007811!6.90e-07!129;UBERON:0002308!7.47e-07!9;UBERON:0000125!7.47e-07!9;UBERON:0005181!9.66e-07!35;UBERON:0005156!9.77e-07!59;UBERON:0000990!9.77e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;6.31e-12;22!UBERON:0000079;6.31e-12;22!UBERON:0000473;1.84e-11;8!UBERON:0003135;7.44e-11;11!UBERON:0000058;7.07e-09;10!UBERON:0005383;1.78e-08;3!UBERON:0005382;1.78e-08;3!UBERON:0004921;4.43e-08;33!UBERON:0005409;1.17e-07;22!UBERON:0001052;6.97e-07;4!UBERON:0003133;8.28e-07;44!UBERON:0000007;8.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.07e-11,22;UBERON:0000079,1.07e-11,22;UBERON:0000473,2.51e-11,8;UBERON:0003135,1.23e-10,11;UBERON:0005383,6.17e-09,3;UBERON:0005382,6.17e-09,3;UBERON:0005156,1.18e-08,59;UBERON:0000990,1.18e-08,59;UBERON:0011216,1.95e-08,223;UBERON:0004921,1.87e-07,118;UBERON:0001052,5.29e-07,4;UBERON:0000369,8.74e-07,4;UBERON:0002435,8.74e-07,4;UBERON:0000204,8.74e-07,4;UBERON:0010082,8.74e-07,4;UBERON:0005409,8.99e-07,25;UBERON:0000007,9.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,0.530119073285941,1.16193942869518,0.621966330092223,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,2.37061319387782,2.57545848628462,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,1.00253235151642,1.93370076765382,0,0,0,0,0.770153371044148,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.127612712494584,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11134053551235,0,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,3.02319297425131,0,0,0,1.25815691606258,2.32727527078292,0,0.197286811273867,0,0,0,0.0927680981618513,0,2.60427761085233,2.44887999989348,0.724999575434793,0.455173793141999,1.5255219017566,0.945550727071745,0.689486746482929,0,0,1.77148277162768,1.92954301800653,6.10326945268333,0.774054819518572,2.36438095162838,0,0,0,0.230850775511391,0,4.6112780877612,0.359030577639089,3.47671590150426,0,0,0,0,0,0,0,0.392125068635479,0.335643173951685,0,0,1.47698645169619,0.489698424477443,1.69623685720729,0,0,0.442287822516696,1.83309043480088,0,0,0,0.067401132980677,0,1.40558667435203,0,1.76098157038881,0,1.18375320854817,0,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0.330991955875499,0.313932918407225,0,3.13070500632772,0,1.56203764501618,0,0.261177619741208,0.698906672968121,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.379864775735272,0.586654148204409,1.20238230377301,0.85381197895741,0.19980960958213,1.44090417154106,0,0.171594997861965,0,0,1.41416420770077,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.998395002494955,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,1.92903778158023,2.47570985875021,0.83088067605837,0.449947783103001,0,0.242998226632099,0,0.394028536495991,0.472091293214983,0.211200673038813,0,0.767660789277781,0,0,0.5085370753095,0,0,0,0,0.246277562248017,0,0,0,0,0.517131825446202,0.52893040697076,1.02652102730598,0,0.213574825135389,0.943225830597996,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,3.61224421375539,1.77213635993397,0.732157589411779,0.3755727921195,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.699397538597222,0,0,0.431299245586727,0,1.20130602011215,0,0,0,0,0,0,4.00285374142735,0,0,0.770750701157514,1.41696576325585,0.638535436228605,0,0,0.691572524642179,0.161475645631851,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0.261906694481422,0,2.80926563812386,0.675375846183947,0,0.620060389503552,0.380494861163441,0,2.74128883428591,0.496211178389294,0,0.255524855279191,0,0,3.03482802118316,2.50428410486427,0.0887023701626388,0,0,1.22345519358297,0.263091094251396,1.30013224972365,0,0.470958557103084,2.98519620840404,6.16598759290336,2.73947616152849,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,1.27016115057279,2.06196181689645,0,0,0.223710863595585,1.66855397145913,4.51096322434397,0,0,0,0.485710993059139,9.82545746540844,3.97901550322736,0,3.61427462524672,0.109940516745429,6.49140227336696,0.926089897295336,0.437119121007915,7.05475944542284,0,4.47785439493089,0,0,0,0,0,0,0,0,0,1.20362050033752,1.46067277649303,2.2936464170227,0,0,0.407948941145488,0.436350690340377,0.5290268405154,0,0,0,0,0.437062287854782,0,1.01988829741982,1.87052183685892,1.28652859348783,0.752122617877125,2.72803313585662,6.96706738406064,0,0,0,0.714193294391221,0,0.186224142887574,0,0.381882949668989,0.404234377916439,0,0.342233301085281,0.673520530145875,1.36272190246085,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,1.34171076742555,0.530119073285941,1.16193942869518,0.621966330092223,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,2.37061319387782,2.57545848628462,0,0.234004265139238,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,1.00253235151642,1.93370076765382,0,0,0,0,0.770153371044148,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,1.01950509218015,0.831076008928724,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.576570202095319,0.127612712494584,1.92199783625545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11134053551235,0,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,3.02319297425131,0,0,0,1.25815691606258,2.32727527078292,0,0.197286811273867,0,0,0,0.0927680981618513,0,2.60427761085233,2.44887999989348,0.724999575434793,0.455173793141999,1.5255219017566,0.945550727071745,0.689486746482929,0,0,1.77148277162768,1.92954301800653,6.10326945268333,0.774054819518572,2.36438095162838,0,0,0,0.230850775511391,0,4.6112780877612,0.359030577639089,3.47671590150426,0,0,0,0,0,0,0,0.392125068635479,0.335643173951685,0,0,1.47698645169619,0.489698424477443,1.69623685720729,0,0,0.442287822516696,1.83309043480088,0,0,0,0.067401132980677,0,1.40558667435203,0,1.76098157038881,0,1.18375320854817,0,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0.330991955875499,0.313932918407225,0,3.13070500632772,0,1.56203764501618,0,0.261177619741208,0.698906672968121,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.379864775735272,0.586654148204409,1.20238230377301,0.85381197895741,0.19980960958213,1.44090417154106,0,0.171594997861965,0,0,1.41416420770077,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.998395002494955,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,1.92903778158023,2.47570985875021,0.83088067605837,0.449947783103001,0,0.242998226632099,0,0.394028536495991,0.472091293214983,0.211200673038813,0,0.767660789277781,0,0,0.5085370753095,0,0,0,0,0.246277562248017,0,0,0,0,0.517131825446202,0.52893040697076,1.02652102730598,0,0.213574825135389,0.943225830597996,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,3.61224421375539,1.77213635993397,0.732157589411779,0.3755727921195,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.699397538597222,0,0,0.431299245586727,0,1.20130602011215,0,0,0,0,0,0,4.00285374142735,0,0,0.770750701157514,1.41696576325585,0.638535436228605,0,0,0.691572524642179,0.161475645631851,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0.261906694481422,0,2.80926563812386,0.675375846183947,0,0.620060389503552,0.380494861163441,0,2.74128883428591,0.496211178389294,0,0.255524855279191,0,0,3.03482802118316,2.50428410486427,0.0887023701626388,0,0,1.22345519358297,0.263091094251396,1.30013224972365,0,0.470958557103084,2.98519620840404,6.16598759290336,2.73947616152849,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,1.27016115057279,2.06196181689645,0,0,0.223710863595585,1.66855397145913,4.51096322434397,0,0,0,0.485710993059139,9.82545746540844,3.97901550322736,0,3.61427462524672,0.109940516745429,6.49140227336696,0.926089897295336,0.437119121007915,7.05475944542284,0,4.47785439493089,0,0,0,0,0,0,0,0,0,1.20362050033752,1.46067277649303,2.2936464170227,0,0,0.407948941145488,0.436350690340377,0.5290268405154,0,0,0,0,0.437062287854782,0,1.01988829741982,1.87052183685892,1.28652859348783,0.752122617877125,2.72803313585662,6.96706738406064,0,0,0,0.714193294391221,0,0.186224142887574,0,0.381882949668989,0.404234377916439,0,0.342233301085281,0.673520530145875,1.36272190246085,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p3@ICA1 | |||
}} | }} |
Latest revision as of 19:25, 19 September 2015
Short description: | p3@ICA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ICA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000407906_5end |
EntrezGene: | ICA1 |
HGNC: | 5343 |
UniProt: | E7ENI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.00e-09 | 7 |
germ cell | 2.00e-09 | 7 |
epithelial cell | 2.14e-08 | 253 |
epithelial cell of prostate | 4.32e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male organism | 1.07e-11 | 22 |
male reproductive system | 1.07e-11 | 22 |
testis | 2.51e-11 | 8 |
male reproductive organ | 1.23e-10 | 11 |
caudate-putamen | 6.17e-09 | 3 |
dorsal striatum | 6.17e-09 | 3 |
reproductive structure | 1.18e-08 | 59 |
reproductive system | 1.18e-08 | 59 |
organ system subdivision | 1.95e-08 | 223 |
subdivision of digestive tract | 1.87e-07 | 118 |
rectum | 5.29e-07 | 4 |
corpus striatum | 8.74e-07 | 4 |
striatum | 8.74e-07 | 4 |
ventral part of telencephalon | 8.74e-07 | 4 |
future corpus striatum | 8.74e-07 | 4 |
gastrointestinal system | 8.99e-07 | 25 |
pituitary gland | 9.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.44e-20 | 106 |
adenocarcinoma | 2.76e-18 | 25 |
cell type cancer | 4.34e-17 | 143 |
thoracic cancer | 1.34e-11 | 4 |
breast cancer | 1.34e-11 | 4 |
gastrointestinal system cancer | 5.88e-09 | 14 |
cancer | 9.61e-09 | 235 |
disease of cellular proliferation | 2.31e-08 | 239 |
respiratory system cancer | 1.78e-07 | 16 |