FFCP PHASE1:Hg19::chr10:15139337..15139391,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30329 | |||
|TSSclassifier=strong | |||
|UniProt=P78345 | |||
|association_with_transcript=0bp_to_ENST00000378197_5end | |||
|cluster_id=chr10:15139337..15139391,+ | |||
|description=CAGE_peak_1_at_RPP38_5end | |||
|id=chr10:15139337..15139391,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.39e-15!53;CL:0000051!1.39e-15!53;CL:0000838!2.22e-15!52;CL:0000945!1.08e-08!24;CL:0000826!1.08e-08!24;CL:0000084!3.89e-08!25;CL:0000827!3.89e-08!25;CL:0000791!8.03e-08!18;CL:0000789!8.03e-08!18;CL:0002420!8.03e-08!18;CL:0002419!8.03e-08!18;CL:0000790!8.03e-08!18;CL:0000625!3.34e-07!11;CL:0000236!3.55e-07!14;CL:0002032!7.28e-07!165;CL:0000837!7.28e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.35e-09;53!CL:0000945;1.08e-08;24!CL:0000084;5.72e-08;25!CL:0000791;1.01e-07;18!CL:0000789;1.01e-07;18!CL:0002419;1.01e-07;18!CL:0000625;3.88e-07;11!CL:0000236;5.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.39e-15,53;CL:0000051,1.39e-15,53;CL:0000838,2.22e-15,52;CL:0000945,1.08e-08,24;CL:0000826,1.08e-08,24;CL:0000084,3.89e-08,25;CL:0000827,3.89e-08,25;CL:0000791,8.03e-08,18;CL:0000789,8.03e-08,18;CL:0002420,8.03e-08,18;CL:0002419,8.03e-08,18;CL:0000790,8.03e-08,18;CL:0000625,3.34e-07,11;CL:0000236,3.55e-07,14;CL:0002032,8.00e-07,161;CL:0000837,8.00e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.35e-09;53!CL:0000790;1.01e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.42e-07!235;DOID:14566!2.15e-07!239;DOID:2531!6.74e-07!51;DOID:0060083!6.74e-07!51;DOID:1240!6.76e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.42e-07,235;DOID:14566,2.15e-07,239;DOID:2531,6.74e-07,51;DOID:0060083,6.74e-07,51;DOID:1240,6.76e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@RPP38 | |||
}} |
Latest revision as of 08:21, 17 September 2015
Short description: | p1@RPP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPP38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378197_5end |
EntrezGene: | RPP38 |
HGNC: | 30329 |
UniProt: | P78345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.39e-15 | 53 |
common lymphoid progenitor | 1.39e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.22e-15 | 52 |
lymphocyte of B lineage | 1.08e-08 | 24 |
pro-B cell | 1.08e-08 | 24 |
T cell | 3.89e-08 | 25 |
pro-T cell | 3.89e-08 | 25 |
mature alpha-beta T cell | 8.03e-08 | 18 |
alpha-beta T cell | 8.03e-08 | 18 |
immature T cell | 8.03e-08 | 18 |
mature T cell | 8.03e-08 | 18 |
immature alpha-beta T cell | 8.03e-08 | 18 |
CD8-positive, alpha-beta T cell | 3.34e-07 | 11 |
B cell | 3.55e-07 | 14 |
hematopoietic oligopotent progenitor cell | 8.00e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.00e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.42e-07 | 235 |
disease of cellular proliferation | 2.15e-07 | 239 |
hematologic cancer | 6.74e-07 | 51 |
immune system cancer | 6.74e-07 | 51 |
leukemia | 6.76e-07 | 39 |