FFCP PHASE1:Hg19::chr10:47640768..47640792,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000454837_5end | |||
|cluster_id=chr10:47640768..47640792,- | |||
|coexpression_cluster_id=C3020 | |||
|description=CAGE_peak_1_at_ENST00000454837_5end | |||
|id=chr10:47640768..47640792,- | |||
|ontology_enrichment_celltype=CL:0000542!6.15e-32!53;CL:0000051!6.15e-32!53;CL:0000838!1.27e-29!52;CL:0000791!1.41e-25!18;CL:0000789!1.41e-25!18;CL:0002420!1.41e-25!18;CL:0002419!1.41e-25!18;CL:0000790!1.41e-25!18;CL:0000084!2.72e-21!25;CL:0000827!2.72e-21!25;CL:0000624!4.09e-17!6;CL:0002087!1.17e-13!119;CL:0000625!4.69e-13!11;CL:0000898!5.12e-13!3;CL:0000738!8.60e-11!140;CL:0000236!4.28e-10!14;CL:0000945!1.25e-09!24;CL:0000826!1.25e-09!24;CL:0002031!2.15e-09!124;CL:0000815!3.38e-09!2;CL:0000792!3.38e-09!2;CL:0002677!3.38e-09!2;CL:0000037!8.47e-08!172;CL:0000566!8.47e-08!172;CL:0000988!4.35e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.71e-10!4;UBERON:0005058!1.71e-10!4;UBERON:0009113!1.71e-10!4;UBERON:0003295!1.71e-10!4;UBERON:0005562!1.71e-10!4;UBERON:0004177!7.09e-10!7;UBERON:0003351!4.06e-07!6;UBERON:0001042!5.20e-07!10;UBERON:0009145!5.20e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.43e-131;2!UBERON:0005058;6.43e-131;2!UBERON:0009113;6.43e-131;2!UBERON:0004177;2.51e-53;5!UBERON:0005057;2.51e-53;5!UBERON:0000077;6.40e-11;27!UBERON:0002405;6.40e-11;27!UBERON:0002390;2.46e-07;32!UBERON:0002368;2.47e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.35e-66,4;UBERON:0005058,3.35e-66,4;UBERON:0009113,3.35e-66,4;UBERON:0003295,3.35e-66,4;UBERON:0005562,3.35e-66,4;UBERON:0003351,1.22e-44,6;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000974,2.38e-27,10;UBERON:0003408,2.38e-27,10;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0004807,1.47e-10,28;UBERON:0000077,3.10e-10,29;UBERON:0002368,1.14e-08,35;UBERON:0000949,5.58e-07,45;UBERON:0000072,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0,1.17030546773475,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,0.512365278902701,0.390178042679635,0.657751618414705,0,0.289803085735052,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,1.0334225573761,3.04166100049704,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p1@ENST00000454837 | |||
}} |
Latest revision as of 13:52, 23 July 2015
Short description: | p1@ENST00000454837 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000454837_5end |
Coexpression cluster: | C3020_thymus_CD19_CD8_CD4_lymph_blood_vein |
Association with transcript: | 16bp_to_ENST00000454837_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.35e-66 | 4 |
hemolymphoid system gland | 3.35e-66 | 4 |
thymic region | 3.35e-66 | 4 |
pharyngeal gland | 3.35e-66 | 4 |
thymus primordium | 3.35e-66 | 4 |
pharyngeal epithelium | 1.22e-44 | 6 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
neck | 2.38e-27 | 10 |
gland of gut | 2.38e-27 | 10 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
respiratory system epithelium | 1.47e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
endocrine gland | 1.14e-08 | 35 |
endocrine system | 5.58e-07 | 45 |
segment of respiratory tract | 1.00e-06 | 47 |