FFCP PHASE1:Hg19::chr11:122027745..122027771,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:122027745..122027771,- | |||
|coexpression_cluster_id=C1615 | |||
|description=CAGE_peak_at_chr11:122027745..122027771,- | |||
|id=chr11:122027745..122027771,- | |||
|ontology_enrichment_celltype=CL:0000055!4.03e-25!180;CL:0000057!5.39e-11!75;CL:0002334!1.19e-09!12;CL:0000243!2.33e-08!15;CL:0000125!2.33e-08!15;CL:0000030!2.33e-08!15;CL:0000339!2.33e-08!15;CL:0002319!2.46e-07!25;CL:0000095!4.46e-07!17;CL:0000123!4.46e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000056;3.59e-12;4!CL:0000153;1.02e-09;9!CL:0000447;1.02e-09;9!CL:0000515;1.88e-09;3!CL:0000135;9.28e-09;3!CL:0000388;9.28e-09;3!CL:0000499;9.91e-09;28!CL:0002552;1.31e-08;5!CL:0002570;5.43e-08;8!CL:0002556;3.17e-07;6!CL:0002334;4.24e-07;12!CL:0000138;5.54e-07;6!CL:0000680;6.74e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.38e-12,4;CL:0000057,6.09e-12,76;CL:0000153,7.75e-10,9;CL:0000447,7.75e-10,9;CL:0000499,6.09e-09,28;CL:0000135,7.76e-09,3;CL:0000388,7.76e-09,3;CL:0002552,1.34e-08,5;CL:0002570,6.40e-08,8;CL:0002334,2.84e-07,12;CL:0002556,3.03e-07,6;CL:0000058,4.97e-07,6;CL:0000138,4.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;3.59e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;5.59e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,5.74e-09,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.28e-09;3!UBERON:0000043;9.28e-09;3!UBERON:0007845;9.28e-09;3!UBERON:0001758;3.17e-07;6!UBERON:0003672;3.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.76e-09,3;UBERON:0000043,7.76e-09,3;UBERON:0007845,7.76e-09,3;UBERON:0001758,3.03e-07,6;UBERON:0003672,3.03e-07,6 | |||
|phase1_expression=1.2717486548939,1.49870366723688,0.845726424575827,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0.369363174230364,0,0.626909442956176,0.572471974262113,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,2.50668955317945,3.18662341713812,1.5905718941022,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.633152558322899,0.529636723252875,0.860509862246441,1.06400514659507,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,2.85815839756851,0,1.03325781175765,3.56400857184616,2.71993622206413,0,0,0,0.375355559615893,2.49357703935765,4.38977620880838,2.45190236639216,1.50238058906597,0,0.179389635688862,0,0,0,0,0,0.18611685633159,5.23206629947925,0.876933046450788,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,12.8373214536647,3.4747513600219,6.78071864416265,6.98337756635593,0,0,0,0,1.01637849688985,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,1.24900292158013,0.473107245101804,0.585707074963566,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,5.98501695823444,0.841980283299221,0.640695746278505,0,0.321707842287215,2.96836132889982,0.616838775210622,2.30830242907065,1.88892458831761,0.519254429183621,1.51073491997947,0,0,0,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.616194468458578,0.15350367472613,0.827019434907183,0.751941714077915,0.580066775656914,0.681813019328807,0,0,0,0,0,0,0,1.3940745403212,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0.545999645631943,0.282810863907425,1.13008116620243,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,5.67617702512956,3.37772216476263,1.64647446479951,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,0,0,2.53350489753592,0,0,0,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,11.1136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.31593289814244,0,0,0.664653872707185,0.330991955875499,0,0,0,1.94144542218394,0,0,0,0,3.26773461696071,0,0,0,0,0,0,3.01492234222852,0.596143835108969,0,0,0.480952921509202,0.213452994739353,0,0,0,0,2.44893156579854,7.08239452722965,0,0.67952103036807,0.209205692624666,1.12198039399954,2.31160471921215,0,0.136905378891993,0,0.429765441419957,0,1.11712960508902,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0.5085370753095,2.17199840701485,0.864221491201268,2.93928624098468,0,0,7.32668493677313,1.01980882368113,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.443716206147409,0.310482014706917,0,0.249960815924213,0,0,3.76425311517075,0,0,2.68658645196373,1.40227985908335,1.10961172300523,4.16686611605196,3.0188148210309,2.66943366478961,0.228840068396924,0.756154618816195,0.15543720058278,0.591420599958536,0.318593534327405,0,0.465788870628778,3.31764966272684,0.265841714557995,0,0,0,0,0.909243296012797,0.214821114084977,0.928067519756987,0.796191777397232,0.800055529326307,3.09056134664514,4.04099386519103,0,0,0,0,0,0.694567422971502,0.489473409012935,0.537266523244462,0,0.438568099157414,2.12026975135057,0,0.506827321959218,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,1.84105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,1.1441462864015,0,0.198916222116275,0.150420656698515,1.21023041222112,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0,0.118193840883968,9.56590056271795,0,0,0,0,0,0,0,0,0,0.521574816907738,2.40513409419076,0,0,0.691259661814092,0,1.77498001095848,1.27820107138737,0,0,0,1.91107787795487,0,0,0,0,0,0,0,0,1.79055697645231,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,5.09781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,5.20793025433452,3.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| |||
|short_description=p@chr11:122027745..122027771,- | |||
}} |
Latest revision as of 19:17, 23 July 2015
Short description: | p@chr11:122027745..122027771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122027745..122027771, - |
Coexpression cluster: | C1615_Myoblast_prostate_giant_Preadipocyte_Smooth_liposarcoma_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.38e-12 | 4 |
fibroblast | 6.09e-12 | 76 |
GAG secreting cell | 7.75e-10 | 9 |
carbohydrate secreting cell | 7.75e-10 | 9 |
stromal cell | 6.09e-09 | 28 |
fibrocyte | 7.76e-09 | 3 |
tendon cell | 7.76e-09 | 3 |
fibroblast of gingiva | 1.34e-08 | 5 |
mesenchymal stem cell of adipose | 6.40e-08 | 8 |
preadipocyte | 2.84e-07 | 12 |
fibroblast of periodontium | 3.03e-07 | 6 |
chondroblast | 4.97e-07 | 6 |
chondrocyte | 4.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.76e-09 | 3 |
tendon | 7.76e-09 | 3 |
regular connective tissue | 7.76e-09 | 3 |
periodontium | 3.03e-07 | 6 |
dentition | 3.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 5.74e-09 | 20 |