FFCP PHASE1:Hg19::chr12:110729465..110729468,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=812 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-385bp_to_ENST00000548169_5end | |||
|cluster_id=chr12:110729465..110729468,+ | |||
|description=CAGE_peak_19_at_ATP2A2_5end | |||
|id=chr12:110729465..110729468,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.12e-08;3!CL:1000428;1.12e-08;3!CL:0000306;8.14e-07;4!CL:0002222;8.14e-07;4!CL:0002224;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.21e-08,3;CL:1000428,1.21e-08,3;CL:0000306,6.87e-07,4;CL:0002222,6.87e-07,4;CL:0002224,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.62e-23;1!UBERON:0004140;2.62e-23;1!UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.75e-45;2!DOID:178;2.62e-23;1!DOID:326;2.62e-23;1!DOID:3978;2.62e-23;1!DOID:3394;2.62e-23;1!DOID:5844;2.62e-23;1!DOID:1287;5.74e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.53e-44,2;DOID:178,4.10e-23,1;DOID:326,4.10e-23,1;DOID:3978,4.10e-23,1;DOID:3394,4.10e-23,1;DOID:5844,4.10e-23,1;DOID:1287,7.18e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.99e-19!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.62e-23;1!UBERON:0002082;2.62e-23;1!UBERON:0007100;1.64e-14;25!UBERON:0004151;1.12e-08;3!UBERON:0000412;1.12e-08;3!UBERON:0001992;1.12e-08;3!UBERON:0010077;8.14e-07;4!UBERON:0005389;8.14e-07;4!UBERON:0000484;8.14e-07;4!UBERON:0000965;8.14e-07;4!UBERON:0001803;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.10e-23,1;UBERON:0002082,2.10e-23,1;UBERON:0010226,2.10e-23,1;UBERON:0007100,1.75e-13,27;UBERON:0004151,1.04e-08,3;UBERON:0000412,1.21e-08,3;UBERON:0001992,1.21e-08,3;UBERON:0005085,4.87e-07,31;UBERON:0010077,6.87e-07,4;UBERON:0005389,6.87e-07,4;UBERON:0000484,6.87e-07,4;UBERON:0002546,6.87e-07,4;UBERON:0000965,6.87e-07,4;UBERON:0001803,6.87e-07,4;UBERON:0003073,6.87e-07,4;UBERON:0005426,6.87e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0.293600439334847,1.66198622559563,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0.422250816255987,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0,0.307801034015188,0,0,0.179515288819544,0.325942115766024,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0.202203398942031,0.802577647298789,0,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0.837847203816763,0.229160424011684,0,1.19807400299395,1.28767814440971,0,1.41085292222125,0.360299883542404,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0.544813624446302,0,0,0.415440338029185,0,0,0.0607495566580247,0,0,0.157363764404994,0.105600336519406,0,0,0,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0.638341257770182,0.544017803369474,0.2506898940227,0,0,0.314108192500469,0,0,0.1251909307065,0,0.332787154610557,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0.619678821295011,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0,0.484426936895553,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0,0,0.781514011233092,0.523813388962845,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0.703484977438482,0,0,0.336283722218824,0,0.455324382702595,0.0887023701626388,0,0,0.203909198930495,0.197318320688547,0,0,0.078493092850514,0.471346769748006,0,0,0,0,1.07214816264985,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0.655678681511872,0,0.735444965261716,0,0,0.594092800654172,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.15777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| |||
|short_description=p19@ATP2A2 | |||
}} |
Latest revision as of 08:05, 16 September 2015
Short description: | p19@ATP2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ATP2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -385bp_to_ENST00000548169_5end |
EntrezGene: | ATP2A2 |
HGNC: | 812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.21e-08 | 3 |
stem cell of epidermis | 1.21e-08 | 3 |
crystallin accumulating cell | 6.87e-07 | 4 |
vertebrate lens cell | 6.87e-07 | 4 |
lens epithelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.10e-23 | 1 |
cardiac ventricle | 2.10e-23 | 1 |
future cardiac ventricle | 2.10e-23 | 1 |
primary circulatory organ | 1.75e-13 | 27 |
cardiac chamber | 1.04e-08 | 3 |
dermal papilla | 1.21e-08 | 3 |
papillary layer of dermis | 1.21e-08 | 3 |
ectodermal placode | 4.87e-07 | 31 |
cuboidal epithelium | 6.87e-07 | 4 |
transparent eye structure | 6.87e-07 | 4 |
simple cuboidal epithelium | 6.87e-07 | 4 |
cranial placode | 6.87e-07 | 4 |
lens of camera-type eye | 6.87e-07 | 4 |
epithelium of lens | 6.87e-07 | 4 |
lens placode | 6.87e-07 | 4 |
lens vesicle | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.53e-44 | 2 |
vascular disease | 4.10e-23 | 1 |
ischemia | 4.10e-23 | 1 |
extrinsic cardiomyopathy | 4.10e-23 | 1 |
myocardial ischemia | 4.10e-23 | 1 |
myocardial infarction | 4.10e-23 | 1 |
cardiovascular system disease | 7.18e-23 | 4 |