FFCP PHASE1:Hg19::chr12:72080171..72080193,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25605 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-82bp_to_ENST00000549735_5end | |||
|cluster_id=chr12:72080171..72080193,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_TMEM19_5end | |||
|id=chr12:72080171..72080193,+ | |||
|ontology_enrichment_celltype=CL:0000236!3.50e-08!14;CL:0000945!1.38e-07!24;CL:0000826!1.38e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.65e-10;13!CL:0000945;3.21e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.76e-11,14;CL:0000945,1.14e-08,24;CL:0000826,1.14e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.01e-19!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002616!6.17e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.50e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-23,114;UBERON:0001049,3.56e-09,56;UBERON:0005068,3.56e-09,56;UBERON:0006241,3.56e-09,56;UBERON:0007135,3.56e-09,56;UBERON:0000073,4.35e-08,53;UBERON:0002616,4.35e-08,53 | |||
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| |||
|short_description=p4@TMEM19 | |||
}} |
Latest revision as of 17:29, 24 September 2015
Short description: | p4@TMEM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM19_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -82bp_to_ENST00000549735_5end |
EntrezGene: | TMEM19 |
HGNC: | 25605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.76e-11 | 14 |
lymphocyte of B lineage | 1.14e-08 | 24 |
pro-B cell | 1.14e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.25e-23 | 114 |
neural tube | 3.56e-09 | 56 |
neural rod | 3.56e-09 | 56 |
future spinal cord | 3.56e-09 | 56 |
neural keel | 3.56e-09 | 56 |
regional part of nervous system | 4.35e-08 | 53 |
regional part of brain | 4.35e-08 | 53 |