FFCP PHASE1:Hg19::chr13:100005404..100005414,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100005404..100005414,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr13:100005404..100005414,+ | |||
|id=chr13:100005404..100005414,+ | |||
|ontology_enrichment_celltype=CL:0000624!3.36e-54!6;CL:0000791!3.04e-31!18;CL:0000789!3.04e-31!18;CL:0002420!3.04e-31!18;CL:0002419!3.04e-31!18;CL:0000790!3.04e-31!18;CL:0000898!9.87e-28!3;CL:0000084!3.04e-22!25;CL:0000827!3.04e-22!25;CL:0000815!9.40e-19!2;CL:0000792!9.40e-19!2;CL:0002677!9.40e-19!2;CL:0000838!6.96e-13!52;CL:0000542!1.29e-12!53;CL:0000051!1.29e-12!53;CL:0000810!8.95e-11!1;CL:0000895!8.95e-11!1;CL:0002436!8.95e-11!1;CL:0002427!8.95e-11!1;CL:0002428!8.95e-11!1;CL:0002429!8.95e-11!1;CL:0002433!8.95e-11!1;CL:0002431!8.95e-11!1;CL:0002432!8.95e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.83e-37;6!CL:0000895;5.22e-26;1!CL:0000791;4.93e-13;18!CL:0000789;4.93e-13;18!CL:0002419;4.93e-13;18!CL:0000898;1.35e-09;3!CL:0000084;1.41e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.72e-37,6;CL:0000810,4.61e-26,1;CL:0000895,4.61e-26,1;CL:0002436,4.61e-26,1;CL:0002427,4.61e-26,1;CL:0002428,4.61e-26,1;CL:0002429,4.61e-26,1;CL:0002433,4.61e-26,1;CL:0002431,4.61e-26,1;CL:0002432,4.61e-26,1;CL:0000893,9.40e-14,2;CL:0002489,9.40e-14,2;CL:0000809,9.40e-14,2;CL:0000808,9.40e-14,2;CL:0000894,9.40e-14,2;CL:0000806,9.40e-14,2;CL:0000807,9.40e-14,2;CL:0000805,9.40e-14,2;CL:0002425,9.40e-14,2;CL:0000791,4.83e-13,18;CL:0000789,4.83e-13,18;CL:0002420,4.83e-13,18;CL:0002419,4.83e-13,18;CL:0000790,4.83e-13,18;CL:0000898,1.30e-09,3;CL:0000084,1.39e-09,25;CL:0000827,1.39e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002427;5.22e-26;1!CL:0002425;1.00e-13;2!CL:0000790;4.93e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-07,4;UBERON:0005058,1.59e-07,4;UBERON:0009113,1.59e-07,4;UBERON:0003295,1.59e-07,4;UBERON:0005562,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16380747125216,0.786021525498329,1.23360899399706,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.886135578334485,0.812411591295047,0,0,0,0,0,4.74517002118593,4.54819407752512,1.04535523804977,0.113309342697566,2.68254345521345,2.74901956386104,2.02415753615602,0.318565414324097,0,0,0,0,0,0,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:100005404..100005414,+ | |||
}} |
Latest revision as of 14:07, 24 July 2015
Short description: | p@chr13:100005404..100005414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100005404..100005414, + |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.72e-37 | 6 |
CD4-positive, alpha-beta thymocyte | 4.61e-26 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.61e-26 | 1 |
mature CD4 single-positive thymocyte | 4.61e-26 | 1 |
resting double-positive thymocyte | 4.61e-26 | 1 |
double-positive blast | 4.61e-26 | 1 |
CD69-positive double-positive thymocyte | 4.61e-26 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.61e-26 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.61e-26 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.61e-26 | 1 |
thymocyte | 9.40e-14 | 2 |
double negative thymocyte | 9.40e-14 | 2 |
double-positive, alpha-beta thymocyte | 9.40e-14 | 2 |
DN4 thymocyte | 9.40e-14 | 2 |
DN1 thymic pro-T cell | 9.40e-14 | 2 |
DN2 thymocyte | 9.40e-14 | 2 |
DN3 thymocyte | 9.40e-14 | 2 |
immature single positive thymocyte | 9.40e-14 | 2 |
early T lineage precursor | 9.40e-14 | 2 |
mature alpha-beta T cell | 4.83e-13 | 18 |
alpha-beta T cell | 4.83e-13 | 18 |
immature T cell | 4.83e-13 | 18 |
mature T cell | 4.83e-13 | 18 |
immature alpha-beta T cell | 4.83e-13 | 18 |
naive T cell | 1.30e-09 | 3 |
T cell | 1.39e-09 | 25 |
pro-T cell | 1.39e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.59e-07 | 4 |
hemolymphoid system gland | 1.59e-07 | 4 |
thymic region | 1.59e-07 | 4 |
pharyngeal gland | 1.59e-07 | 4 |
thymus primordium | 1.59e-07 | 4 |