FFCP PHASE1:Hg19::chr8:22844757..22844771,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:22844757..22844771,+
|short_description=p11@RHOBTB2
|description=CAGE_peak_11_at_RHOBTB2_5end
|association_with_transcript=-158bp_to_ENST00000519685,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23221 | |EntrezGene=23221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18756 | |HGNC=18756 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | |UniProt=E9PBU2,A8K9Z8,Q9BYZ6 | ||
|association_with_transcript=-158bp_to_ENST00000519685,NM_001160036,uc003xcp.2_5end | |||
|cluster_id=chr8:22844757..22844771,+ | |||
|description=CAGE_peak_11_at_RHOBTB2_5end | |||
|id=chr8:22844757..22844771,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.10e-21!254;CL:0002076!1.82e-17!43;CL:0000223!8.47e-15!59;CL:0002368!5.36e-14!13;CL:0002159!1.06e-11!13;CL:0002202!9.59e-11!9;CL:0002632!9.59e-11!9;CL:0000244!1.34e-08!4;CL:0000731!1.34e-08!4;CL:0000039!2.70e-07!7;CL:0000586!2.70e-07!7;CL:0002328!3.39e-07!3;CL:0000068!3.83e-07!3;CL:0000069!3.83e-07!3;CL:0000307!3.83e-07!3;CL:0000377!3.83e-07!3;CL:0002150!4.87e-07!3;CL:0000861!4.87e-07!3;CL:0000362!9.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.03e-18;14!CL:0000307;5.54e-17;3!CL:0002202;3.14e-15;9!CL:0000362;3.14e-15;9!CL:0002632;3.14e-15;9!CL:0000240;1.11e-14;6!CL:0000311;1.11e-14;6!CL:0000079;1.11e-14;6!CL:0000237;1.11e-14;6!CL:0000317;1.28e-12;2!CL:1000448;1.28e-12;2!CL:0002308;1.28e-12;2!CL:0002140;1.28e-12;2!CL:0000575;1.66e-12;2!CL:0002368;1.80e-10;13!CL:0000312;3.04e-10;5!CL:0002077;1.03e-08;34!CL:0002328;1.64e-08;3!CL:0002541;5.84e-08;3!CL:0000039;7.83e-08;7!CL:0000586;7.83e-08;7!CL:0002336;6.41e-07;1!CL:0002261;6.41e-07;1!CL:0002170;6.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.12e-18,14;CL:0000068,1.16e-16,3;CL:0000069,1.16e-16,3;CL:0000307,1.16e-16,3;CL:0000377,1.16e-16,3;CL:0000362,3.01e-15,9;CL:0002202,4.44e-15,9;CL:0002632,4.44e-15,9;CL:0000240,8.65e-15,6;CL:0000311,8.65e-15,6;CL:0000079,8.65e-15,6;CL:0000237,8.65e-15,6;CL:0000036,8.65e-15,6;CL:0000357,8.65e-15,6;CL:0000114,8.65e-15,6;CL:0000317,1.53e-12,2;CL:1000448,1.53e-12,2;CL:0002308,1.53e-12,2;CL:0002140,1.53e-12,2;CL:0000575,2.14e-12,2;CL:0002368,2.27e-10,13;CL:0000312,2.63e-10,5;CL:0002077,3.29e-09,34;CL:0002328,1.52e-08,3;CL:0000066,3.14e-08,253;CL:0002541,6.74e-08,3;CL:0000039,7.57e-08,7;CL:0000586,7.57e-08,7;CL:0002076,3.53e-07,42;CL:0002336,5.57e-07,1;CL:0002261,5.57e-07,1;CL:0002170,5.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;5.54e-17;3!CL:0000357;1.11e-14;6!CL:0000114;1.11e-14;6 | |||
|ontology_enrichment_disease=DOID:305!1.39e-09!106;DOID:0050687!6.95e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.67e-14!169;UBERON:0000925!5.67e-14!169;UBERON:0006595!5.67e-14!169;UBERON:0008947!2.00e-10!38;UBERON:0003258!2.00e-10!38;UBERON:0000065!2.33e-10!53;UBERON:0005631!7.20e-10!14;UBERON:0000158!7.20e-10!14;UBERON:0000365!9.90e-10!5;UBERON:0001004!1.07e-09!72;UBERON:0001007!6.80e-09!155;UBERON:0001555!6.80e-09!155;UBERON:0007026!6.80e-09!155;UBERON:0005911!1.33e-08!82;UBERON:0007196!2.13e-08!14;UBERON:0001558!2.13e-08!14;UBERON:0005178!2.89e-08!34;UBERON:0002224!2.89e-08!34;UBERON:0005153!3.48e-08!37;UBERON:0005910!5.03e-08!6;UBERON:0005181!6.27e-08!35;UBERON:0000077!1.86e-07!130;UBERON:0000062!2.86e-07!511;UBERON:0004921!2.95e-07!129;UBERON:0004185!2.95e-07!129;UBERON:0004815!3.39e-07!3;UBERON:0002031!3.39e-07!3;UBERON:0000464!6.23e-07!104;UBERON:0005157!6.81e-07!51;UBERON:0003101!7.70e-07!22;UBERON:0000079!7.70e-07!22;UBERON:0003124!8.32e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.19e-12;15!UBERON:0001558;1.19e-12;15!UBERON:0002419;1.28e-12;2!UBERON:0007771;1.28e-12;2!UBERON:0003297;1.28e-12;2!UBERON:0001821;1.28e-12;2!UBERON:0003487;1.28e-12;2!UBERON:0001820;1.28e-12;2!UBERON:0003126;1.45e-12;7!UBERON:0001005;1.45e-12;7!UBERON:0001003;4.85e-09;15!UBERON:0007376;4.85e-09;15!UBERON:0005631;6.37e-09;10!UBERON:0000158;6.37e-09;10!UBERON:0005178;1.35e-08;34!UBERON:0002224;1.35e-08;34!UBERON:0004815;1.64e-08;3!UBERON:0002031;1.64e-08;3!UBERON:0003135;4.63e-08;11!UBERON:0003124;5.84e-08;3!UBERON:0000920;5.84e-08;3!UBERON:0006947;5.84e-08;3!UBERON:0004054;5.84e-08;3!UBERON:0005181;1.75e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.43e-12,15;UBERON:0001558,1.43e-12,15;UBERON:0002419,1.53e-12,2;UBERON:0007771,1.53e-12,2;UBERON:0003297,1.53e-12,2;UBERON:0001821,1.53e-12,2;UBERON:0003487,1.53e-12,2;UBERON:0001820,1.53e-12,2;UBERON:0005089,1.53e-12,2;UBERON:0005088,1.53e-12,2;UBERON:0003126,2.02e-12,7;UBERON:0001005,2.02e-12,7;UBERON:0005178,4.67e-09,34;UBERON:0002224,4.67e-09,34;UBERON:0001003,4.74e-09,15;UBERON:0007376,4.74e-09,15;UBERON:0007383,4.74e-09,15;UBERON:0005181,9.17e-09,35;UBERON:0004815,1.52e-08,3;UBERON:0002031,1.52e-08,3;UBERON:0003135,5.39e-08,11;UBERON:0008947,5.60e-08,38;UBERON:0003258,5.60e-08,38;UBERON:0000920,6.74e-08,3;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3 | |||
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| ||
|short_description=p11@RHOBTB2 | |||
}} | }} |
Latest revision as of 12:56, 17 September 2015
Short description: | p11@RHOBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RHOBTB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_ENST00000519685, NM_001160036, uc003xcp.2_5end |
EntrezGene: | RHOBTB2 |
HGNC: | 18756 |
UniProt: | E9PBU2A8K9Z8Q9BYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.43e-12 | 15 |
lower respiratory tract | 1.43e-12 | 15 |
skin gland | 1.53e-12 | 2 |
epidermis gland | 1.53e-12 | 2 |
gland of integumental system | 1.53e-12 | 2 |
sebaceous gland | 1.53e-12 | 2 |
skin sebaceous gland | 1.53e-12 | 2 |
sweat gland | 1.53e-12 | 2 |
sweat gland placode | 1.53e-12 | 2 |
sebaceous gland placode | 1.53e-12 | 2 |
trachea | 2.02e-12 | 7 |
respiratory airway | 2.02e-12 | 7 |
thoracic cavity element | 4.67e-09 | 34 |
thoracic cavity | 4.67e-09 | 34 |
skin epidermis | 4.74e-09 | 15 |
outer epithelium | 4.74e-09 | 15 |
enveloping layer of ectoderm | 4.74e-09 | 15 |
thoracic segment organ | 9.17e-09 | 35 |
lower respiratory tract epithelium | 1.52e-08 | 3 |
epithelium of bronchus | 1.52e-08 | 3 |
male reproductive organ | 5.39e-08 | 11 |
respiratory primordium | 5.60e-08 | 38 |
endoderm of foregut | 5.60e-08 | 38 |
egg chorion | 6.74e-08 | 3 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |