FFCP PHASE1:Hg19::chr16:811041..811057,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-15bp_to_NM_013404_5end | |||
|cluster_id=chr16:811041..811057,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_3_at_MSLN_5end | |||
|id=chr16:811041..811057,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.29e-15!254;CL:0000077!2.41e-12!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.47e-17;19!CL:0000349;1.08e-07;19!CL:0002577;2.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.78e-25,253;CL:0000077,1.23e-17,19;CL:0000076,4.79e-10,63;CL:0000349,1.11e-07,19;CL:0002577,2.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.61e-17;29 | |||
|ontology_enrichment_disease=DOID:305!1.49e-11!106;DOID:299!8.08e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;3.80e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.04e-18,106;DOID:0050687,4.73e-12,143;DOID:162,1.06e-08,235;DOID:14566,2.95e-08,239;DOID:299,3.25e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.63e-13!219;UBERON:0000062!1.21e-12!511;UBERON:0005631!1.19e-11!14;UBERON:0000158!1.19e-11!14;UBERON:0000464!5.42e-10!104;UBERON:0001737!6.27e-10!9;UBERON:0004119!1.69e-09!169;UBERON:0000925!1.69e-09!169;UBERON:0006595!1.69e-09!169;UBERON:0000466!2.44e-09!126;UBERON:0008947!2.51e-09!38;UBERON:0003258!2.51e-09!38;UBERON:0000077!6.07e-09!130;UBERON:0007023!8.95e-09!115;UBERON:0000065!1.35e-08!53;UBERON:0001041!3.06e-08!98;UBERON:0004921!3.58e-08!129;UBERON:0004185!3.58e-08!129;UBERON:0001004!1.02e-07!72;UBERON:0001007!1.11e-07!155;UBERON:0001555!1.11e-07!155;UBERON:0007026!1.11e-07!155;UBERON:0003124!2.55e-07!7;UBERON:0000072!6.97e-07!46;UBERON:0002553!7.53e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.89e-16;9!UBERON:0001557;1.89e-16;9!UBERON:0000065;5.10e-10;44!UBERON:0002294;2.56e-09;7!UBERON:0001173;2.56e-09;7!UBERON:0000072;3.68e-09;37!UBERON:0001987;9.80e-09;4!UBERON:0000478;2.80e-08;24!UBERON:0000305;8.95e-08;7!UBERON:0005631;1.99e-07;10!UBERON:0000158;1.99e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.17e-16,9;UBERON:0008947,1.12e-14,38;UBERON:0003258,1.12e-14,38;UBERON:0005631,1.48e-13,14;UBERON:0000158,1.48e-13,14;UBERON:0001041,4.92e-10,87;UBERON:0004119,1.65e-09,160;UBERON:0000925,1.65e-09,160;UBERON:0006595,1.65e-09,160;UBERON:0000065,9.98e-09,54;UBERON:0001987,1.16e-08,4;UBERON:0004340,1.16e-08,4;UBERON:0000478,3.10e-08,24;UBERON:0001004,4.68e-08,74;UBERON:0001007,9.07e-08,145;UBERON:0001555,9.07e-08,145;UBERON:0007026,9.07e-08,145;UBERON:0000305,9.16e-08,7;UBERON:0003124,2.10e-07,7;UBERON:0000072,3.51e-07,47;UBERON:0004921,3.77e-07,118;UBERON:0002294,5.33e-07,9;UBERON:0001173,5.33e-07,9;UBERON:0004912,5.33e-07,9;UBERON:0005177,9.70e-07,101 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,2.79120467188971,10.0483031179879,10.2869121509097,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0.928896739896456,0,0.30120591877825,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0.619412741790207,0,0,0,0,0,0,0,0,0.898893937780338,0,0,1.27867425159808,0,0,0,0,0,1.24564449799115,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.916853528483988,4.37154345951051,4.82019775619758,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60456474173561,0,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,5.32380600179297,5.39471008249925,6.50729780685401,6.28675644574646,5.22910665821775,4.03360052488864,6.20224017536756,5.101758093259,5.38646019724947,0,0,1.2347220339942,0,0,0,0,0,1.35287282397425,0,0.219500570817251,1.1240175325762,0.201057944823262,2.68506490959736,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,0.581267877027924,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,2.61460037580088,1.89948683245908,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,8.18444442904901,38.2801510874143,19.9577593597589,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25599806453706,1.46329140498388,3.92174884588428,0,0,0,0,0,0,3.25135725052623,7.02365683396795,1.52925763827023,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0,1.08890984861323,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8680966305394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9193914906068,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0.121360521749513,0,0,126.0570879415,10.3937638291424,142.522565774044,0,0.140669416410513,0,0,0,1.9924798825107,0.552567831062295,0,0,0,0,1.07842021376792,7.16084698702437,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,0,4.66553137970549,0,1.65471377237555,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,33.117292909773,0,0.615602068030377,0,0,0,0,27.753100896677,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,1.22206028986725,0,0,0,1.14581926067151,0.802577647298789,0.468528891450678,0,7.04392628155523,0,2.76209081994573,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,1.74118413160805,2.44617335538842,0,3.57998425769615,2.70430473218887,3.28461828212837,0.0969890164884194,0,3.16373037092745,0,0,0.50648636764703,12.1241857295578,2.64524106830061,1.28071796843612,1.79828648623917,9.36587711501689,0,0,0.14405479798815,0,15.3201122500917,0.135904206073614,0,0,0.288950589901519,1.20084057741958,0.684526894459965,0,0,0,0,0,0,1.19807400299395,0,0.223171457441873,0.470284307407084,0,0,0.236349546921671,0.0824158583811665,0.202210631562555,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.315222829196793,0.83927341015997,0,0,8.82809907669448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,2.81926008926669,13.4552139835295,6.4453765090863,7.04206394090232,0,0,0.121792598380896,5.10673006216145,0,0,0,0,0,0,0,0.3755727921195,0,0.332787154610557,0.745156835296601,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,1.04349012362347,0.601030435988874,2.28483127301277,0.406870733204662,0,0.429642228169954,0,0,0,0,0,0,12.9055286372893,10.7220795687463,0.260994291965212,13.8290614562486,9.95546639592486,6.60789102167462,3.04451029838529,8.64644052050722,40.1289810729034,11.1314161945905,6.75199133948202,2.02730928783687,0,8.98118888501116,0,0,0.194860308839388,0.531459361253452,0.981392365535065,0,0,2.95836972702078,0,0,0,0,0,1.81843360035278,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,1.80504788038217,0,0,0,0.982631505060581,19.2212912082159,0.0675375846183947,0,0.826747186004736,0.253663240775627,0,0.548257766857182,0.496211178389294,0,0.638812138197976,0,0,0,0,2.04015451374069,0,0,0.40781839786099,0.460409414939944,1.89110145414349,0,0.078493092850514,0.314231179832004,0.280272163313789,0,0,0,0,0,0,0,0,0,3.58508801897295,1.38251932362818,0,0,0,4.65725755210022,13.517305244099,0.31020638566432,0,9.39585627101456,9.91317359513954,11.9479566482624,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0.588925401344836,0,0,0,0,0.257831551894309,0.599646935549574,0,0,0,0,0,0.143339583151451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| |||
|short_description=p3@MSLN | |||
}} |
Latest revision as of 00:34, 18 September 2015
Short description: | p3@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -15bp_to_NM_013404_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.78e-25 | 253 |
mesothelial cell | 1.23e-17 | 19 |
squamous epithelial cell | 4.79e-10 | 63 |
extraembryonic cell | 1.11e-07 | 19 |
placental epithelial cell | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.17e-16 | 9 |
respiratory primordium | 1.12e-14 | 38 |
endoderm of foregut | 1.12e-14 | 38 |
extraembryonic membrane | 1.48e-13 | 14 |
membranous layer | 1.48e-13 | 14 |
foregut | 4.92e-10 | 87 |
endoderm-derived structure | 1.65e-09 | 160 |
endoderm | 1.65e-09 | 160 |
presumptive endoderm | 1.65e-09 | 160 |
respiratory tract | 9.98e-09 | 54 |
placenta | 1.16e-08 | 4 |
allantois | 1.16e-08 | 4 |
extraembryonic structure | 3.10e-08 | 24 |
respiratory system | 4.68e-08 | 74 |
digestive system | 9.07e-08 | 145 |
digestive tract | 9.07e-08 | 145 |
primitive gut | 9.07e-08 | 145 |
amnion | 9.16e-08 | 7 |
chorion | 2.10e-07 | 7 |
segment of respiratory tract | 3.51e-07 | 47 |
subdivision of digestive tract | 3.77e-07 | 118 |
biliary system | 5.33e-07 | 9 |
biliary tree | 5.33e-07 | 9 |
biliary bud | 5.33e-07 | 9 |
trunk region element | 9.70e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.04e-18 | 106 |
cell type cancer | 4.73e-12 | 143 |
cancer | 1.06e-08 | 235 |
disease of cellular proliferation | 2.95e-08 | 239 |
adenocarcinoma | 3.25e-07 | 25 |