FFCP PHASE1:Hg19::chr17:46620898..46620927,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3212 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5113 | |||
|TSSclassifier=strong | |||
|UniProt=P14652 | |||
|association_with_transcript=146bp_to_X14571_5end | |||
|cluster_id=chr17:46620898..46620927,- | |||
|description=CAGE_peak_9_at_HOXB2_5end | |||
|id=chr17:46620898..46620927,- | |||
|ontology_enrichment_celltype=CL:0000738!2.31e-17!140;CL:0002031!8.47e-17!124;CL:0002057!7.59e-16!42;CL:0002087!1.42e-14!119;CL:0000860!1.93e-13!45;CL:0000037!4.09e-13!172;CL:0000566!4.09e-13!172;CL:0000988!8.80e-12!182;CL:0002032!2.67e-11!165;CL:0000837!2.67e-11!165;CL:0000557!3.27e-09!71;CL:0000839!2.29e-08!70;CL:0000838!3.43e-08!52;CL:0000766!5.94e-08!76;CL:0000542!9.67e-08!53;CL:0000051!9.67e-08!53;CL:0002009!1.45e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.32e-12;33!CL:0002057;8.32e-12;33!CL:0002087;4.33e-11;104!CL:0000473;6.62e-09;39!CL:0000234;6.62e-09;39!CL:0000624;1.19e-08;6!CL:0000945;1.54e-08;24!CL:0000576;1.84e-08;48!CL:0000766;7.94e-08;69!CL:0000542;9.22e-08;53!CL:0000738;5.71e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.41e-31,136;CL:0002031,3.71e-28,120;CL:0002087,2.88e-25,115;CL:0000037,8.89e-25,168;CL:0000988,3.63e-23,177;CL:0002032,1.73e-21,161;CL:0000837,1.73e-21,161;CL:0000860,7.76e-17,42;CL:0002057,7.76e-17,42;CL:0000557,4.10e-15,67;CL:0000473,9.09e-15,48;CL:0000234,9.09e-15,48;CL:0000766,3.25e-14,72;CL:0000838,1.01e-13,52;CL:0000542,2.67e-13,53;CL:0000051,2.67e-13,53;CL:0002009,7.25e-13,61;CL:0000839,9.00e-13,66;CL:0002194,3.39e-11,59;CL:0000576,3.39e-11,59;CL:0000040,3.39e-11,59;CL:0000559,3.39e-11,59;CL:0000763,1.71e-09,108;CL:0000049,1.71e-09,108;CL:0000624,7.14e-09,6;CL:0000945,1.36e-08,24;CL:0000826,1.36e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-13;42!CL:0000051;9.22e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.58e-08!102;UBERON:0003061!1.58e-08!102;UBERON:0002193!2.57e-08!112;UBERON:0002371!3.49e-08!80;UBERON:0001474!6.66e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.91e-13,98;UBERON:0003061,2.91e-13,98;UBERON:0002371,3.51e-13,76;UBERON:0002193,1.26e-11,108;UBERON:0001474,1.83e-11,82;UBERON:0002405,2.79e-11,93;UBERON:0004765,1.44e-09,90;UBERON:0001434,1.12e-07,100 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0,0.331397375727916,0,1.80808358407193,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,1.83392173795083,1.9704141467987,3.06972047123349,2.75354993794233,1.91914699048606,6.34746105595912,0,0.30120591877825,0,0,0,4.69760702935756,0.553995408531877,5.01361118675354,7.81239134577067,0,0,0,0.726991193897824,0,0.727752183563449,0.929716147622738,0,0.309706370895104,6.32923263108731,3.07392847834921,3.07426898855161,9.65287906062532,6.45484683583826,6.77132432971709,1.69418105588344,0.545812300115692,0.674170453335254,9.18251677112708,3.20929027076094,10.2293940127847,1.31940520074686,0.199463657621632,0.852449501065388,7.2552309657146,7.94339314567596,6.22822248995575,2.51248665256743,1.5644487552606,2.17188844705117,5.44859552370032,6.2607198117886,5.37986058649504,1.05627643155971,0.425208599930087,1.46761051855863,0.336985893439485,0.901061357049038,0.16072558669708,2.28010194992999,0.99458338599545,2.73996230646951,1.75996244461323,0.546138611262131,0,1.70692089026603,1.20118796110804,1.14950487990897,0,0.954053754535364,5.69212969109448,2.34894875748376,4.58727873750275,3.96513985737078,4.48406850385229,1.05353633910031,3.73748563216283,4.71612915298998,3.70082698199117,0.83593247695339,2.28145586643513,2.36723902867367,1.94826728407911,1.55974639639243,2.94605907474837,2.43687284041983,2.70803863765016,0.896639238079726,1.30059347559878,1.80881695064044,0.276350017785848,1.15921234294021,1.4828656316206,0,3.1360657141493,0.339928028092699,3.83220493601921,4.46715679127419,3.28925599625354,0.318565414324097,0,0.950452044448374,0.903450714466637,0.127986611154418,0,0.473554504088034,0.821127996921047,1.20964045934839,2.67440195783507,3.47578569318718,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,3.33996642519167,0,0,0,0,0,3.33886874027479,10.2959083940423,3.34311751196608,0,0,0.694281003215189,0,0,0,0.208994966536811,0,0,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,3.31022952033047,0,0,0,0,0.74000264525148,0,0.404132016209064,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.538168907066586,0,0,0.600182192168805,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0.591534000199219,0.337169380156203,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0,0.433099343283221,0.462985512576611,0.190254152234598,3.1608175918371,0,0,0,0,0,0.16798212819886,0.141775097242386,0.806026704325635,0.290633938513962,0.383382679165211,0.985326475791887,0.088048434013226,1.24396869324463,5.04419836959365,1.8936365013957,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0,0.646358578788889,0,1.690605505112,0,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0.65147236858747,0,0,0,0.871533458600294,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,2.69004345584465,1.97030760201927,6.46882724578552,8.59898343074314,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0.82707210449155,3.66714141391649,1.81436848265855,3.03127571446259,1.66435439510497,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0,0,0,0.154209693802656,1.24293207719189,0.328508624055237,0.519254429183621,0.464841513839837,1.20859449591622,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.447749509444357,0.657779629937804,1.3071772551245,0,0,0,0.309123034943167,0,0,1.14853107599234,0,0,0,0,0.15350367472613,0.413509717453592,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0.765676274967505,0,0,0.62962469366128,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.192444225451024,0,2.17781969722645,0.376575203107117,0,0,0,0.229723400206959,0,0.764637207142375,1.13929437434833,0,0,1.94541993357815,0.540031437238115,0,2.56377770705936,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| |||
|short_description=p9@HOXB2 | |||
}} |
Latest revision as of 06:33, 25 September 2015
Short description: | p9@HOXB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 146bp_to_X14571_5end |
EntrezGene: | HOXB2 |
HGNC: | 5113 |
UniProt: | P14652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.41e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 3.71e-28 | 120 |
nongranular leukocyte | 2.88e-25 | 115 |
hematopoietic stem cell | 8.89e-25 | 168 |
hematopoietic cell | 3.63e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.73e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-21 | 161 |
classical monocyte | 7.76e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.76e-17 | 42 |
granulocyte monocyte progenitor cell | 4.10e-15 | 67 |
defensive cell | 9.09e-15 | 48 |
phagocyte | 9.09e-15 | 48 |
myeloid leukocyte | 3.25e-14 | 72 |
lymphoid lineage restricted progenitor cell | 1.01e-13 | 52 |
lymphocyte | 2.67e-13 | 53 |
common lymphoid progenitor | 2.67e-13 | 53 |
macrophage dendritic cell progenitor | 7.25e-13 | 61 |
myeloid lineage restricted progenitor cell | 9.00e-13 | 66 |
monopoietic cell | 3.39e-11 | 59 |
monocyte | 3.39e-11 | 59 |
monoblast | 3.39e-11 | 59 |
promonocyte | 3.39e-11 | 59 |
myeloid cell | 1.71e-09 | 108 |
common myeloid progenitor | 1.71e-09 | 108 |
CD4-positive, alpha-beta T cell | 7.14e-09 | 6 |
lymphocyte of B lineage | 1.36e-08 | 24 |
pro-B cell | 1.36e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.91e-13 | 98 |
blood island | 2.91e-13 | 98 |
bone marrow | 3.51e-13 | 76 |
hemolymphoid system | 1.26e-11 | 108 |
bone element | 1.83e-11 | 82 |
immune system | 2.79e-11 | 93 |
skeletal element | 1.44e-09 | 90 |
skeletal system | 1.12e-07 | 100 |