FFCP PHASE1:Hg19::chr17:78866905..78866920,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:78866905..78866920,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr17:78866905..78866920,+ | |||
|id=chr17:78866905..78866920,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.79e-34!42;CL:0000860!3.66e-31!45;CL:0002194!9.37e-24!63;CL:0000576!9.37e-24!63;CL:0000040!9.37e-24!63;CL:0000559!9.37e-24!63;CL:0002009!1.22e-22!65;CL:0000839!3.81e-20!70;CL:0000557!1.09e-19!71;CL:0000766!9.57e-19!76;CL:0000763!6.81e-12!112;CL:0000049!6.81e-12!112;CL:0002087!1.62e-11!119;CL:0002031!1.47e-10!124;CL:0000738!3.45e-09!140;CL:0002032!1.72e-07!165;CL:0000837!1.72e-07!165;CL:0000988!4.49e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.03e-92;33!CL:0002057;3.03e-92;33!CL:0000473;2.41e-68;39!CL:0000234;2.41e-68;39!CL:0000576;3.86e-42;48!CL:0000766;8.98e-22;69!CL:0000763;7.76e-13;100!CL:0002087;2.42e-12;104!CL:0000738;3.04e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-77,42;CL:0002057,3.53e-77,42;CL:0000473,2.86e-71,48;CL:0000234,2.86e-71,48;CL:0002194,1.53e-55,59;CL:0000576,1.53e-55,59;CL:0000040,1.53e-55,59;CL:0000559,1.53e-55,59;CL:0002009,1.64e-53,61;CL:0000839,5.74e-49,66;CL:0000557,3.87e-48,67;CL:0000766,2.46e-44,72;CL:0002087,2.29e-31,115;CL:0002031,9.61e-30,120;CL:0000763,2.15e-29,108;CL:0000049,2.15e-29,108;CL:0000738,2.38e-25,136;CL:0002032,9.05e-22,161;CL:0000837,9.05e-22,161;CL:0000037,1.55e-20,168;CL:0000988,4.29e-19,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.23e-58;42!CL:0000049;8.93e-12;108!UBERON:0008947;2.63e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.80e-18!80;UBERON:0001474!5.88e-18!86;UBERON:0004765!6.71e-17!101;UBERON:0001434!6.71e-17!101;UBERON:0002390!3.09e-15!102;UBERON:0003061!3.09e-15!102;UBERON:0001737!3.31e-13!9;UBERON:0002193!1.01e-12!112;UBERON:0002405!2.87e-11!115;UBERON:0002204!4.95e-11!167;UBERON:0001557!1.24e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.95e-26;9!UBERON:0001557;2.95e-26;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-41,76;UBERON:0001474,4.17e-38,82;UBERON:0002405,3.45e-35,93;UBERON:0004765,4.13e-34,90;UBERON:0002390,4.96e-33,98;UBERON:0003061,4.96e-33,98;UBERON:0001434,5.25e-30,100;UBERON:0002193,2.60e-29,108;UBERON:0001737,1.98e-26,9;UBERON:0002204,2.03e-16,167;UBERON:0001557,5.86e-15,19;UBERON:0003081,2.85e-13,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,2.32637182047304,5.66813915533214,2.42584061187816,4.41615170120801,11.1015329765893,8.981484755958,10.6446185159196,9.99026755463492,3.54723344832878,5.86067657252252,9.68227025375739,1.35426486594342,7.9061782607894,19.9221489542227,4.26974620445661,11.9372718024652,14.1208771913481,5.11469700639233,3.29851300186716,7.97854630486527,2.13112375266347,1.45104619314292,2.8369261234557,1.24564449799115,13.3161792586074,15.1230046341858,5.42972111762792,1.21079900526674,3.31449872388808,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.910415432919148,0,0,0,0,0.267540828089713,0,0.566546713487831,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.01150814046861,1.92808823906786,1.65440959098591,1.96091499683166,1.66089433377768,1.07865046528132,1.37355025587742,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0,1.34502172792233,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,1.54911749049875,0.845086807596724,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96343015813436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.562677665642051,0,4.28490072989575,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.591860433821602,0,0,1.93866549219044,0.278304294485554,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0.741383633679017,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0.596143835108969,0.189932387867636,0,0,0,0,0,0,0,0,1.24252535565433,0,0.271808412147228,0.418411385249333,0.713987523454252,0.577901179803038,0,0,0,0,4.73197237702766,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0.414239055347196,0,9.88058159489721,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,1.38172136692479,0.303859956177382,0.276516872303462,0,0.398594520940089,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.785181748008205,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0.405225507710368,0,0,0.253663240775627,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0.514464028312255,0,0.263091094251396,0.236387681767936,0.222462803784138,0,0,0,0,0,2.8665101273223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:78866905..78866920,+ | |||
}} |
Latest revision as of 22:35, 25 July 2015
Short description: | p@chr17:78866905..78866920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78866905..78866920, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.53e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-77 | 42 |
defensive cell | 2.86e-71 | 48 |
phagocyte | 2.86e-71 | 48 |
monopoietic cell | 1.53e-55 | 59 |
monocyte | 1.53e-55 | 59 |
monoblast | 1.53e-55 | 59 |
promonocyte | 1.53e-55 | 59 |
macrophage dendritic cell progenitor | 1.64e-53 | 61 |
myeloid lineage restricted progenitor cell | 5.74e-49 | 66 |
granulocyte monocyte progenitor cell | 3.87e-48 | 67 |
myeloid leukocyte | 2.46e-44 | 72 |
nongranular leukocyte | 2.29e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 9.61e-30 | 120 |
myeloid cell | 2.15e-29 | 108 |
common myeloid progenitor | 2.15e-29 | 108 |
leukocyte | 2.38e-25 | 136 |
hematopoietic oligopotent progenitor cell | 9.05e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.05e-22 | 161 |
hematopoietic stem cell | 1.55e-20 | 168 |
hematopoietic cell | 4.29e-19 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-41 | 76 |
bone element | 4.17e-38 | 82 |
immune system | 3.45e-35 | 93 |
skeletal element | 4.13e-34 | 90 |
hematopoietic system | 4.96e-33 | 98 |
blood island | 4.96e-33 | 98 |
skeletal system | 5.25e-30 | 100 |
hemolymphoid system | 2.60e-29 | 108 |
larynx | 1.98e-26 | 9 |
musculoskeletal system | 2.03e-16 | 167 |
upper respiratory tract | 5.86e-15 | 19 |
lateral plate mesoderm | 2.85e-13 | 203 |