FFCP PHASE1:Hg19::chr8:60031934..60031986,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:60031934..60031986,-
|short_description=p6@TOX
|description=CAGE_peak_6_at_TOX_5end
|association_with_transcript=-167bp_to_ENST00000361421,ENST00000456290,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9760 | |EntrezGene=9760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18988 | |HGNC=18988 | ||
|TSSclassifier=strong | |||
|UniProt=O94900,B4DYA1 | |UniProt=O94900,B4DYA1 | ||
|association_with_transcript=-167bp_to_ENST00000361421,ENST00000456290,NM_014729,uc003xtw.1_5end | |||
|cluster_id=chr8:60031934..60031986,- | |||
|description=CAGE_peak_6_at_TOX_5end | |||
|id=chr8:60031934..60031986,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002556;8.72e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,7.89e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.60e-11!129;UBERON:0007811!2.60e-11!129;UBERON:0000033!2.90e-11!123;UBERON:0005743!5.34e-11!86;UBERON:0001017!1.37e-10!82;UBERON:0004121!2.62e-10!169;UBERON:0003056!1.07e-09!61;UBERON:0000924!1.78e-09!173;UBERON:0006601!1.78e-09!173;UBERON:0000073!2.05e-09!94;UBERON:0001016!2.05e-09!94;UBERON:0001869!4.94e-09!32;UBERON:0001893!1.04e-08!34;UBERON:0000956!1.67e-08!25;UBERON:0000203!1.67e-08!25;UBERON:0002780!2.12e-08!41;UBERON:0001890!2.12e-08!41;UBERON:0006240!2.12e-08!41;UBERON:0002020!3.45e-08!34;UBERON:0003528!3.45e-08!34;UBERON:0002791!3.46e-08!33;UBERON:0003075!4.12e-08!86;UBERON:0007284!4.12e-08!86;UBERON:0003080!5.74e-08!42;UBERON:0001950!5.78e-08!20;UBERON:0000955!6.15e-08!69;UBERON:0006238!6.15e-08!69;UBERON:0002616!3.43e-07!59;UBERON:0002346!4.29e-07!90;UBERON:0001049!4.44e-07!57;UBERON:0005068!4.44e-07!57;UBERON:0006241!4.44e-07!57;UBERON:0007135!4.44e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003129;2.03e-10;7!UBERON:0001758;8.72e-09;6!UBERON:0003672;8.72e-09;6!UBERON:0000075;1.42e-08;16!UBERON:0011137;1.46e-08;11!UBERON:0010323;1.46e-08;11!UBERON:0002203;2.50e-08;6!UBERON:0001768;2.50e-08;6!UBERON:0002200;2.50e-08;6!UBERON:0001801;8.25e-08;14!UBERON:0000956;2.27e-07;25!UBERON:0000203;2.27e-07;25!UBERON:0001869;5.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003129,2.10e-10,7;UBERON:0004121,1.51e-09,171;UBERON:0000924,1.51e-09,171;UBERON:0006601,1.51e-09,171;UBERON:0001758,7.89e-09,6;UBERON:0003672,7.89e-09,6;UBERON:0010323,1.50e-08,11;UBERON:0000075,1.68e-08,16;UBERON:0001444,1.70e-08,49;UBERON:0003056,1.97e-08,61;UBERON:0002203,2.03e-08,6;UBERON:0001768,2.03e-08,6;UBERON:0002200,2.03e-08,6;UBERON:0011137,4.35e-08,14;UBERON:0000033,8.22e-08,56;UBERON:0001801,9.12e-08,14;UBERON:0000956,2.47e-07,25;UBERON:0000203,2.47e-07,25;UBERON:0001869,3.14e-07,32;UBERON:0011216,4.40e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0,0,0.204000691244253,0,5.15224776835902,1.36874425072884,1.88313959392204,0,0,0,0.393364276848904,0,0,0,0,0,0,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.579386075843295,0,0.486634870302636,3.11964896641424,1.55210578223795,2.98638271356629,0.589405839739707,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,1.37559020970034,1.25396979922086,0,1.06729878806013,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.337834441449967,0,0,0.732806975721629,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0,1.64025002283658,0,1.1409436430889,0,0.117434498643765,0.323745888736263,0.421352420106746,1.42907919878425,1.35117749042945,0.826606249406124,4.75201142912821,5.93440630268536,0,0.718618141816238,4.04006673489759,2.62748891731125,0.554128230968366,4.38977620880838,9.50112166976961,3.75595147266492,0,0.358779271377724,0.85422955527427,0.635795703478686,0.600182192168805,0.92747276314595,1.8034837803194,6.51408997160564,0,0,0.252433774244115,0.736399189138395,0.80823028409406,0,0.201504196455281,1.52604533079439,0,0,0,0.243947412259191,1.06023814657188,0.580969714347592,0.518305275076852,0.504641701751257,2.55484151353081,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0.441463099414651,0,0,0,0,0,0,3.9096996637239,1.03993478527958,0,3.13012093432707,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,2.90259361757081,1.8735593944205,1.8936365013957,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,1.04007436911366,1.02882949704857,4.25547396069835,0.799266537048298,0.428933980974443,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0.723906533337896,0.205476322550383,0,0.112085143993527,0,0,0,11.4342580900109,5.20559415430487,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,1.2269149171914,0.500170521059677,0.271265023699736,0,1.07057393278297,0.630809660135739,0.117141414992713,1.20378439891088,2.27407504055985,0,0,0.737476674166813,0.955719759148911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0,0,0,1.49258782613989,1.27463817604702,1.83574180943194,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,0.457847324091717,0.990113999047056,0,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,2.15846949099978,1.37268514868027,0.706874414074119,0,0,0,1.46290121726877,0,0,0.545999645631943,0.848432591722276,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.294747123039363,0,0,0.211107635297664,0,4.17420491142287,5.59895552391973,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.284567373393656,0.478278818186467,4.39074617152197,0.383010740264733,1.48171507906718,0.649243880549111,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.439524537815682,0.485442086998054,0,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0,0,0.19924798825107,0.828851746593443,0.503865495708552,0.613612095012929,0,0,0,0,0,0.295930216910801,0,1.11136990144637,0,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0,0.964771509003264,0,0.331737779793674,0,1.97446857438575,0,0.139423744278603,0.615602068030377,0.227884111694002,0,0,0,0.638002319463839,0.0915975934018623,0,1.02193298195737,19.151591280193,1.82832850090172,0,0,0,0.189753732724185,1.58936578980379,0.210998064528027,0,0,0,0.995261931078505,3.53830258013357,1.83309043480088,1.77912677208373,1.97702302314405,0.522109747527277,0.337005664903385,0,0.702793337176017,0,0,0,1.18375320854817,2.41981432097328,2.44858209304392,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.698906672968121,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0.19871461170299,1.83601308272048,0,0.0801588202515337,2.56143593687223,0,0,0.114536596165916,0.171594997861965,0,0.99402028452346,0,17.3957383774226,21.5481863403406,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0,0.321506296930038,1.51293380256957,0.83088067605837,0,0,1.57948847310864,0,0.394028536495991,0.577000469484979,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,1.10043013569766,0.828478110694391,0,0,1.82688897571344,0,0,0,0,0.32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|short_description=p6@TOX | |||
}} | }} |
Latest revision as of 16:16, 18 September 2015
Short description: | p6@TOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TOX_5end |
Coexpression cluster: | NA |
Association with transcript: | -167bp_to_ENST00000361421, ENST00000456290, NM_014729, uc003xtw.1_5end |
EntrezGene: | TOX |
HGNC: | 18988 |
UniProt: | O94900B4DYA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 7.89e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
skull | 2.10e-10 | 7 |
ectoderm-derived structure | 1.51e-09 | 171 |
ectoderm | 1.51e-09 | 171 |
presumptive ectoderm | 1.51e-09 | 171 |
periodontium | 7.89e-09 | 6 |
dentition | 7.89e-09 | 6 |
cranial skeletal system | 1.50e-08 | 11 |
subdivision of skeletal system | 1.68e-08 | 16 |
subdivision of head | 1.70e-08 | 49 |
pre-chordal neural plate | 1.97e-08 | 61 |
vasculature of eye | 2.03e-08 | 6 |
uvea | 2.03e-08 | 6 |
vasculature of head | 2.03e-08 | 6 |
axial skeletal system | 4.35e-08 | 14 |
head | 8.22e-08 | 56 |
anterior segment of eyeball | 9.12e-08 | 14 |
cerebral cortex | 2.47e-07 | 25 |
pallium | 2.47e-07 | 25 |
cerebral hemisphere | 3.14e-07 | 32 |
organ system subdivision | 4.40e-07 | 223 |