FFCP PHASE1:Hg19::chr18:44181350..44181385,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26521 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVV2 | |||
|association_with_transcript=240bp_to_AK127869_5end | |||
|cluster_id=chr18:44181350..44181385,- | |||
|coexpression_cluster_id=C1235 | |||
|description=CAGE_peak_1_at_LOXHD1_5end | |||
|id=chr18:44181350..44181385,- | |||
|ontology_enrichment_celltype=CL:0002057!1.51e-57!42;CL:0000860!6.39e-53!45;CL:0000766!6.25e-47!76;CL:0002194!6.69e-38!63;CL:0000576!6.69e-38!63;CL:0000040!6.69e-38!63;CL:0000559!6.69e-38!63;CL:0002009!2.18e-36!65;CL:0000839!7.26e-35!70;CL:0000557!3.27e-34!71;CL:0000763!2.81e-32!112;CL:0000049!2.81e-32!112;CL:0000738!5.85e-24!140;CL:0000037!4.97e-20!172;CL:0000566!4.97e-20!172;CL:0002087!2.93e-19!119;CL:0002032!2.52e-18!165;CL:0000837!2.52e-18!165;CL:0000988!4.02e-18!182;CL:0002031!9.39e-16!124;CL:0000094!2.09e-13!8;CL:0000081!2.27e-09!11;CL:0000775!5.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.93e-79;33!CL:0002057;6.93e-79;33!CL:0000473;5.32e-54;39!CL:0000234;5.32e-54;39!CL:0000576;3.76e-39;48!CL:0000766;8.74e-27;69!CL:0000094;2.52e-17;8!CL:0000763;2.09e-16;100!CL:0000775;5.72e-13;3!CL:0002087;1.49e-12;104!CL:0000081;2.10e-12;11!CL:0000771;4.53e-09;2!CL:0000738;6.46e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.51e-77,42;CL:0002057,3.51e-77,42;CL:0000473,1.50e-66,48;CL:0000234,1.50e-66,48;CL:0000766,1.46e-61,72;CL:0002194,1.14e-51,59;CL:0000576,1.14e-51,59;CL:0000040,1.14e-51,59;CL:0000559,1.14e-51,59;CL:0002009,9.50e-50,61;CL:0000763,1.17e-45,108;CL:0000049,1.17e-45,108;CL:0000839,1.89e-45,66;CL:0000557,1.15e-44,67;CL:0000738,3.02e-32,136;CL:0000037,2.80e-29,168;CL:0002032,1.27e-27,161;CL:0000837,1.27e-27,161;CL:0000988,2.63e-27,177;CL:0002087,1.79e-26,115;CL:0002031,1.05e-21,120;CL:0000094,2.08e-17,8;CL:0000775,5.73e-13,3;CL:0000081,1.83e-12,11;CL:0000771,4.53e-09,2;CL:0000134,6.59e-09,354;CL:0000219,1.01e-08,386;CL:0002320,1.48e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.36e-58;42!CL:0000049;1.37e-14;108 | |||
|ontology_enrichment_disease=DOID:171!4.26e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.96e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.69e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.60e-37!102;UBERON:0003061!6.60e-37!102;UBERON:0002193!2.56e-32!112;UBERON:0002371!4.59e-29!80;UBERON:0001474!3.08e-26!86;UBERON:0002405!3.05e-21!115;UBERON:0004765!1.16e-20!101;UBERON:0001434!1.16e-20!101;UBERON:0003081!8.43e-14!216;UBERON:0002204!1.13e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.14e-16;4!UBERON:0000923;2.14e-16;4!UBERON:0010316;2.14e-16;4!UBERON:0005291;2.14e-16;4!UBERON:0002050;4.00e-13;5!UBERON:0005423;4.00e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.22e-39,98;UBERON:0003061,3.22e-39,98;UBERON:0002371,1.57e-38,76;UBERON:0001474,3.50e-35,82;UBERON:0002193,8.07e-35,108;UBERON:0004765,2.10e-31,90;UBERON:0002405,3.73e-30,93;UBERON:0001434,1.58e-27,100;UBERON:0003081,1.04e-15,203;UBERON:0002204,1.57e-13,167;UBERON:0002384,8.45e-09,371;UBERON:0000926,3.55e-07,315;UBERON:0004120,3.55e-07,315;UBERON:0006603,3.55e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91914699048606,0.619264493264304,0,0,0,0,0,0,4.43196326825502,1.40381113229099,0,0,0,0,4.50734540216651,2.26725566213286,0.970336244751265,6.50801303335917,4.11167888021826,2.78735733805593,3.74000110018796,2.56160706529101,1.89185783910868,7.23965929546899,3.87290810150296,5.41705946377367,4.89430082810772,3.27487380069415,1.79778787556068,4.89734227793444,3.20929027076094,3.19668562899521,2.96866170168044,1.39624560335142,0.852449501065388,8.12585868160035,3.97169657283798,3.73693349397345,5.27622197039161,2.60741459210101,3.04064382587163,4.84319602106695,6.62899744777616,1.58231193720442,0.422510572623884,0,0,3.36985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9761685747324,20.9413021442817,24.0360997792901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,1.62310970137278,0,0,1.25343916618419,0,0,0,0,0,18.2057832720555,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70690610781485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,2.15361907373044,0,0,0.446342914883745,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6104543130352,0,4.92224336866673,6.58982252315217,57.258323087659,13.4074780313579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,31.8326952290913,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOXHD1 | |||
}} |
Latest revision as of 15:25, 19 September 2015
Short description: | p1@LOXHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOXHD1_5end |
Coexpression cluster: | C1235_neuroectodermal_neuroblastoma_Neutrophils_peripheral_Eosinophils_acute_neuroepithelioma |
Association with transcript: | 240bp_to_AK127869_5end |
EntrezGene: | LOXHD1 |
HGNC: | 26521 |
UniProt: | Q8IVV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.51e-77 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.51e-77 | 42 |
defensive cell | 1.50e-66 | 48 |
phagocyte | 1.50e-66 | 48 |
myeloid leukocyte | 1.46e-61 | 72 |
monopoietic cell | 1.14e-51 | 59 |
monocyte | 1.14e-51 | 59 |
monoblast | 1.14e-51 | 59 |
promonocyte | 1.14e-51 | 59 |
macrophage dendritic cell progenitor | 9.50e-50 | 61 |
myeloid cell | 1.17e-45 | 108 |
common myeloid progenitor | 1.17e-45 | 108 |
myeloid lineage restricted progenitor cell | 1.89e-45 | 66 |
granulocyte monocyte progenitor cell | 1.15e-44 | 67 |
leukocyte | 3.02e-32 | 136 |
hematopoietic stem cell | 2.80e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.27e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-27 | 161 |
hematopoietic cell | 2.63e-27 | 177 |
nongranular leukocyte | 1.79e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-21 | 120 |
granulocyte | 2.08e-17 | 8 |
neutrophil | 5.73e-13 | 3 |
blood cell | 1.83e-12 | 11 |
eosinophil | 4.53e-09 | 2 |
mesenchymal cell | 6.59e-09 | 354 |
motile cell | 1.01e-08 | 386 |
connective tissue cell | 1.48e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.22e-39 | 98 |
blood island | 3.22e-39 | 98 |
bone marrow | 1.57e-38 | 76 |
bone element | 3.50e-35 | 82 |
hemolymphoid system | 8.07e-35 | 108 |
skeletal element | 2.10e-31 | 90 |
immune system | 3.73e-30 | 93 |
skeletal system | 1.58e-27 | 100 |
lateral plate mesoderm | 1.04e-15 | 203 |
musculoskeletal system | 1.57e-13 | 167 |
connective tissue | 8.45e-09 | 371 |
mesoderm | 3.55e-07 | 315 |
mesoderm-derived structure | 3.55e-07 | 315 |
presumptive mesoderm | 3.55e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.69e-14 | 10 |