FFCP PHASE1:Hg19::chr19:16436139..16436182,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:16436139..16436182,+ | |||
|coexpression_cluster_id=C2481 | |||
|description=CAGE_peak_at_chr19:16436139..16436182,+ | |||
|id=chr19:16436139..16436182,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.10e-13!140;CL:0000791!1.90e-11!18;CL:0000789!1.90e-11!18;CL:0002420!1.90e-11!18;CL:0002419!1.90e-11!18;CL:0000790!1.90e-11!18;CL:0002087!2.40e-11!119;CL:0002031!9.24e-10!124;CL:0000542!6.43e-09!53;CL:0000051!6.43e-09!53;CL:0000838!7.07e-09!52;CL:0000084!2.18e-08!25;CL:0000827!2.18e-08!25;CL:0000625!5.83e-08!11;CL:0002057!1.07e-07!42;CL:0000094!6.55e-07!8;CL:0000766!8.88e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.27e-16;18!CL:0000789;7.27e-16;18!CL:0002419;7.27e-16;18!CL:0000625;1.67e-11;11!CL:0000084;3.89e-11;25!CL:0000094;5.27e-10;8!CL:0000542;3.99e-09;53!CL:0000236;1.45e-08;13!CL:0002087;2.02e-07;104!CL:0000624;2.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.77e-22,136;CL:0002087,7.90e-18,115;CL:0002031,1.80e-16,120;CL:0000791,3.90e-16,18;CL:0000789,3.90e-16,18;CL:0002420,3.90e-16,18;CL:0002419,3.90e-16,18;CL:0000790,3.90e-16,18;CL:0000838,2.00e-14,52;CL:0000542,6.05e-14,53;CL:0000051,6.05e-14,53;CL:0000037,6.62e-14,168;CL:0002032,4.05e-13,161;CL:0000837,4.05e-13,161;CL:0000988,3.85e-12,177;CL:0000625,1.01e-11,11;CL:0000084,2.66e-11,25;CL:0000827,2.66e-11,25;CL:0000094,4.63e-10,8;CL:0000766,5.53e-10,72;CL:0002393,1.70e-08,9;CL:0002397,1.70e-08,9;CL:0000236,1.11e-07,14;CL:0000624,2.41e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.27e-16;18!CL:0000051;3.99e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.27e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.99e-07;15!UBERON:0000179;3.99e-07;15!UBERON:0000463;3.99e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.90e-09,114;UBERON:0002390,1.03e-08,98;UBERON:0003061,1.03e-08,98;UBERON:0002193,2.03e-08,108;UBERON:0000178,4.55e-07,15;UBERON:0000179,4.55e-07,15;UBERON:0000463,4.55e-07,15 | |||
|phase1_expression=1.99846217197612,0.642301571672949,1.55049844505568,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,9.8341069212226,5.75744097145819,6.19264493264304,0,0.30120591877825,0.369754010166788,0,0,0,1.66198622559563,2.60707781711184,2.82114131930607,0.895661896959697,3.56283032620878,3.09090681161024,1.01778767145695,0.755751887377619,0.242584061187816,1.39457422143411,1.23350366406548,0,1.43846196161075,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,2.70852973188684,1.69418105588344,0.272906150057846,0.224723484445085,0.306083892370903,1.92557416245656,1.27867425159808,0,0.997318288108159,0,1.45104619314292,0.56738522469114,1.24564449799115,1.00499466102697,0,1.3031330682307,0.605399502633369,1.10483290796269,0,2.95757400836718,4.889898899196,1.46761051855863,1.01095768031846,0.600707571366025,1.44653028027372,5.70025487482497,7.75775041076451,4.38393969035121,10.5597746676794,7.09980194640771,3.55803701545422,8.96133467389665,8.00791974072025,5.17277195959035,7.27149360063348,0.954053754535364,11.384259382189,10.5702694086769,9.17455747500549,0,2.80254281490768,0.263384084775077,4.91774425284583,7.46720449223413,10.6912779479745,5.85152733867373,4.88883399950386,1.4203434172042,1.94826728407911,6.46180649934007,3.53527088969805,4.2091439970888,4.06205795647523,7.04502258491213,3.77172107923647,2.13769275984779,2.48715016007264,1.73881851441031,8.89719378972362,4.81573490561484,7.31748666634838,2.37949619664889,5.74830740402882,4.46715679127419,2.78321661221453,6.37130828648194,1.95325036156926,2.85135613334512,5.42070428679982,4.60751800155906,3.74792179657038,5.44587679701239,4.10563998460523,11.6931911070345,14.4417705723094,9.99288386791313,0,0,0.255725123687061,0.722878304769133,2.00535164254356,1.73815822752988,1.5905718941022,0.486634870302636,0,0,0.263504357079378,3.53643503843824,0,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,1.04497483268405,0,0,0,0.402829317109147,2.28081631715554,0.488124115096339,0,0,0.17859945656816,0.44905874525234,0,0,0,0.366403487860815,6.58902087180316,3.87780264148325,0,1.98788780678127,2.65924074495618,0.264818361626438,0.860509862246441,1.77334191099179,0,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0.413303124703062,0,0.741800787835671,0,0,0,0,0,0,0,0.751190294532984,0.453728732640084,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.389748020644795,0.252433774244115,0.184099797284599,0.323292113637624,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,40.014326299369,21.6179930125442,46.0784882006287,0,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0.797814349754612,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0.448340575974109,12.6099686529233,15.0939302401662,12.9626466642546,0,0,0,0.167516265334349,0,13.4821264310493,23.932916736322,12.018049889645,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.35142424497814,3.61135319673263,9.09630016223939,1.03473071292505,0,0.368738337083406,0.347534457872331,0.195801157462741,0,5.37596867919507,9.92285323765637,7.4709290462411,0.606255142892519,0,0,1.73675465473144,0.460385919864187,1.96462066103151,2.05022638809122,1.02341449813341,1.28683136914886,0,0.154209693802656,0.532685175939381,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0.082509499920588,0,0,8.03419649220798,0.580024309752732,0,0,0.137836572484531,0.107420244868274,0,0,0.356128142586949,0,0.192190067365106,0,0,0.464845549297286,0.94443704049192,0,0.924100740528266,0.532306030317022,0.869932992075073,1.29726953372744,0.572499546967965,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,7.06453776179307,0,0,0,0.606547444719948,1.58510321173008,0,0,0.974853958525138,2.11300293513511,0.136499911407986,1.41405431953713,0,0,7.29782872765342,4.82295973779139,0,0,0.811641507850816,0.6196469961995,1.12678241012897,0.430234056612155,0,0.35667105148125,0,6.12212142363226,1.97576935775941,0,0,0,0.670302275535787,0,2.35359501941948,0,0,0,0,2.02979043692868,3.82318603571188,5.12682468456746,1.19115887728894,0.822724546172388,3.24236655596359,2.70015718619057,3.96562588147135,0,0,0,0.371606350251437,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.541753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| |||
|short_description=p@chr19:16436139..16436182,+ | |||
}} |
Latest revision as of 04:42, 26 July 2015
Short description: | p@chr19:16436139..16436182, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:16436139..16436182, + |
Coexpression cluster: | C2481_Mast_Neutrophils_blood_lung_Natural_CD8_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.77e-22 | 136 |
nongranular leukocyte | 7.90e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-16 | 120 |
mature alpha-beta T cell | 3.90e-16 | 18 |
alpha-beta T cell | 3.90e-16 | 18 |
immature T cell | 3.90e-16 | 18 |
mature T cell | 3.90e-16 | 18 |
immature alpha-beta T cell | 3.90e-16 | 18 |
lymphoid lineage restricted progenitor cell | 2.00e-14 | 52 |
lymphocyte | 6.05e-14 | 53 |
common lymphoid progenitor | 6.05e-14 | 53 |
hematopoietic stem cell | 6.62e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.05e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.05e-13 | 161 |
hematopoietic cell | 3.85e-12 | 177 |
CD8-positive, alpha-beta T cell | 1.01e-11 | 11 |
T cell | 2.66e-11 | 25 |
pro-T cell | 2.66e-11 | 25 |
granulocyte | 4.63e-10 | 8 |
myeloid leukocyte | 5.53e-10 | 72 |
intermediate monocyte | 1.70e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.70e-08 | 9 |
B cell | 1.11e-07 | 14 |
CD4-positive, alpha-beta T cell | 2.41e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.90e-09 | 114 |
hematopoietic system | 1.03e-08 | 98 |
blood island | 1.03e-08 | 98 |
hemolymphoid system | 2.03e-08 | 108 |
blood | 4.55e-07 | 15 |
haemolymphatic fluid | 4.55e-07 | 15 |
organism substance | 4.55e-07 | 15 |