FFCP PHASE1:Hg19::chr19:3061274..3061306,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |||
|association_with_transcript=-28bp_to_X73358_5end | |||
|cluster_id=chr19:3061274..3061306,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_AES_5end | |||
|id=chr19:3061274..3061306,- | |||
|ontology_enrichment_celltype=CL:0000542!1.60e-11!53;CL:0000051!1.60e-11!53;CL:0000791!1.79e-11!18;CL:0000789!1.79e-11!18;CL:0002420!1.79e-11!18;CL:0002419!1.79e-11!18;CL:0000790!1.79e-11!18;CL:0000838!2.21e-11!52;CL:0000625!2.27e-08!11;CL:0000084!3.51e-08!25;CL:0000827!3.51e-08!25;CL:0000236!9.19e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.60e-15;18!CL:0000789;2.60e-15;18!CL:0002419;2.60e-15;18!CL:0000084;5.69e-12;25!CL:0000236;7.77e-12;13!CL:0000542;2.92e-11;53!CL:0000625;2.96e-11;11!CL:0000624;5.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.17e-17,53;CL:0000051,6.17e-17,53;CL:0000838,9.68e-17,52;CL:0000791,3.01e-15,18;CL:0000789,3.01e-15,18;CL:0002420,3.01e-15,18;CL:0002419,3.01e-15,18;CL:0000790,3.01e-15,18;CL:0000084,7.17e-12,25;CL:0000827,7.17e-12,25;CL:0000625,3.27e-11,11;CL:0000236,1.97e-10,14;CL:0000624,5.36e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.60e-15;18!CL:0000051;2.92e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.93e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.82e-08;15!UBERON:0000179;5.82e-08;15!UBERON:0000463;5.82e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.17e-10,114;UBERON:0000178,6.34e-08,15;UBERON:0000179,6.34e-08,15;UBERON:0000463,6.34e-08,15 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.704772020479856,0,0.446961094427288,0,0,0,0.261185628199839,0.737201809504527,2.09340350391728,0,0.263766978228454,1.8564952944007,1.32558950291166,4.70627602516243,1.20538905604795,2.92124036154949,2.92759679274304,0.369363174230364,2.44800829493104,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0.382067028739756,0.164201178899891,0.314843125254717,3.54027849164014,9.21190555433311,3.09632246632152,0,2.10844143144775,2.21852406100073,0,0,0,2.76997704265939,3.20871115952227,3.25516306073778,0,0,0.257575567634187,0.290796477559129,1.13362783106643,0.242584061187816,0,0.411167888021826,0,0,0,0,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0,0,0.997318288108159,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0,0,0,15.839662001519,19.6609900054367,15.1216573156804,16.2157484575273,24.8245511962328,22.4153451582248,26.4417949113945,14.3108063180305,17.6456020423929,10.5702694086769,7.26319133437935,0,3.92355994087075,0.526768169550154,16.523620689562,14.5413982217191,16.0369169219617,64.5339872208017,40.4143610625652,34.0882420129008,23.3792074089494,29.8580024452265,40.6556152315275,44.9713806004751,38.1833447908672,35.3532042442863,38.497566877724,7.89301942097645,16.3046510493651,18.5473974870434,24.3189963585779,22.4734295595359,30.3153019034433,19.0359695731911,15.3288197440768,21.6485290654057,10.6268270648191,19.1139248594458,14.9749194386976,14.2567806667256,19.1230401228771,19.7099381177804,24.9861453104692,15.6272986349051,18.8859439291841,14.314078768956,18.1859333132785,13.7583183688659,2.43806866313962,0.670700859703636,0.767175371061182,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,3.73290365168481,0.728590576585084,0.370784442784429,0,0.174129737299267,0.26591592103773,1.43094374583205,0,1.48583000531826,0.79504962946682,1.72046919021225,0.694281003215189,1.69592382577203,1.67799774483962,2.47606237746061,1.04497483268405,0,0,0,0.805658634218294,0,0.24406205754817,0,4.86085168729056,0.357198913136319,0.22452937262617,0,0,0.949265659568129,1.09921046358244,0,3.87780264148325,2.18047026071267,0,0.886413581652058,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,2.1349799145941,0.74000264525148,0.622422070799533,1.21239604862719,0.653847612453835,0,0,1.17160715916898,0.936480230490962,2.2818872861778,0.896692083310806,0.23486899728753,0.485618833104395,0.421352420106746,0.61246251376468,1.59684612505298,1.44656093646072,0,0.741800787835671,1.82032272387605,2.15585442544872,0.841680569770331,1.25118519871964,0.554128230968366,1.75591048352335,0.612975591598039,0.901428353439581,0.453728732640084,0.538168907066586,0.640672166455702,1.05965950579781,0.300091096084402,0.92747276314595,0.257640540045629,0,0.337552664482532,0.487185025805993,0,0.184099797284599,4.20279747728911,0.710019185033229,0.302256294682921,0.847802961552438,1.35282597214308,0.272746120590835,0.860413786167011,0.365921118388786,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,2.4694440679884,1.47008711385542,0,0,0.590789906681404,0,0,0.857839051492628,0,0,0.603173834469785,2.68506490959736,0.977424915930974,1.03993478527958,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0.93733833986777,0,0.425325291727159,0,0,0,0,0.264145302039678,0,0.144119953416961,0,0.317489471460845,0.763976851116555,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0.448524337381443,0,0.07333828582095,0.258543431515556,7.15312891703765,0,2.39344304926383,1.04007436911366,0,0,1.3321108950805,1.42977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.723906533337896,0.61642896765115,0,0.336255431980582,11.0337225713079,19.6221093122161,13.0909897005343,1.01637849688985,0,0,0.502548796003046,0,0.749007023947182,0,0.414415513436035,2.57652132610194,3.50119364741774,0.813795071099207,1.66376689224646,1.24900292158013,0.315404830067869,0.702848489956279,0,2.27407504055985,1.03473071292505,0.664225598535437,0.553107505625109,0.781952530212746,1.56640925970192,2.05886054286514,9.71809722777571,7.54999702865159,12.5938518208064,0,0,0.30239029332968,0.744323423456331,0,0.280660094433074,0.896974044789907,1.02341449813341,0.321707842287215,1.48418066444991,0.154209693802656,0.887808626565635,0.410635780069046,1.03850885836724,1.04589340613963,0.362578348774867,2.20557117333613,0.276242966807689,0.574072240823034,1.27463817604702,1.04899531967539,0.451199612907412,0,1.56869953835371,0,0.422206515571503,0,1.02056223165909,1.51141141271498,0,1.62567862526312,2.00675909541941,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0,0,0,1.03041011647722,0.183138929636687,0.247528499761764,0,0,3.21367859688319,1.25671933779759,0.462145851343933,0.460511024178389,0.551346289938122,1.50388342815583,1.74020032697074,0.255679882248303,0.801288320820636,0.495854746082934,0.768760269460425,0.255225424989168,0.2023155617111,1.85938219718914,0.62962469366128,0.6970372701606,5.85263802334569,1.59691809095107,3.47973196830029,1.29726953372744,0.143124886741991,0,0.316379424718726,0.571890581771475,2.303080121802,0.855877976067841,0.318203247925937,3.92474320099615,0.719489830333259,0.823611089208164,0.471249609382746,1.61745985258653,0,1.26377536871694,2.43816869544795,2.19342140668156,2.11300293513511,1.22849920267187,1.41405431953713,2.26016233240486,0,2.65375590096488,0.876901770507525,0,1.9676842561399,0.405820753925408,1.8589409885985,2.53526042279017,0.430234056612155,0.589494246078727,0.7133421029625,0.709522128141196,0.422215270595328,0,2.27683904259429,4.19921664293979,0.769776901804097,2.68120910214315,2.17781969722645,1.31801321087491,0.43050537267123,0,0,0.459446800413919,10.1489521846434,12.9988325214204,9.68400218196076,10.4821981201427,12.752230465672,7.13320642311989,6.48037724685738,6.34500141035416,0.213648142254946,2.88743956579008,0,1.11481905075431,2.45257662059956,1.63626239701352,0.318852545457645,3.19326994292507,0.5745161103971,0.211673582723883,0,0,1.36940807419915,0,0,0.677167111206413,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0.586032717087576,0.36408156524854,0,0.284136146806413,0,0,0,0,0.984685914873589,1.11308705022906,0,1.68900326502395,1.19548792950642,1.65770349318689,0.503865495708552,0.102268682502155,0.369254416383208,1.24415835064723,0.179736702294654,0,0,2.26879832964947,23.948309234694,1.11136990144637,1.93866549219044,1.85536196323703,0,0,0.0874599999961957,3.62499787717397,0.227586896570999,0.254253650292766,0,0,0,0.173624994933292,1.77148277162768,0.964771509003264,0,0.663475559587348,1.47773809476774,0.87754158861589,0,0.139423744278603,7.00247352384553,0.227884111694002,0.23056390438806,0.628303510868405,0.108647371922008,1.5950057986596,2.38153742844842,1.06606955203727,1.02193298195737,0,0.166211681900156,0.225595660617181,0.19606253431774,0.671286347903371,0.37950746544837,0.476809736941136,0,0,0,0,0.995261931078505,0.973033209536731,3.05515072466813,0,0,0,2.3590396543237,0,1.40558667435203,1.094728735294,0,0.971121518136371,1.57833761139756,0,0,0.758238955541855,0,0,0,0.661983911750998,0.627865836814451,0,0,1.52542140314453,0.173559738335131,0.195984794828755,0,2.09672001890436,0.343972064943233,0.0967563312890851,0,0,0.678923115418936,0.176512253383001,1.58186518546373,0.411125773940253,0.397429223405979,1.01297273529406,0,0,1.49417096317547,0,0,0.343609788497747,5.49103993158287,0.14405479798815,0.99402028452346,0,0.135904206073614,0.313808538937,0.101998217636322,0,1.20084057741958,2.60120219894787,0,0,0,1.11712960508902,1.14580212005842,0,0.199679000498991,1.28767814440971,1.33902874465124,0.671834724867263,0.360299883542404,0,0,0,0,0.688992370603241,0,0,1.49823746722733,0.321506296930038,0.137539436597234,0,0.2249738915515,0,1.39723980313457,0.335434687599266,1.26089131678717,0.577000469484979,0.844802692155252,0,0.191915197319445,3.57347663186684,0,0,1.62899880526114,0.864221491201268,3.5924609612035,0,0.410462603746695,0,0.113312091520126,0.146552233678082,1.32506888912221,0.775697738169303,1.45455861916959,1.53978154095896,0,1.9221734262185,2.35806457649499,3.31391244277756,1.9846640872478,0,0.60896299190448,0,0,0,0,0,0,0,0.488105059607853,0.751145584238999,0.573409195690071,0.443716206147409,1.17983165588629,0.691743174681154,1.99968652739371,0,0,0.705797459094515,0,7.10113040193043,0.447764408660622,0.701139929541673,0,0.378806010550178,0,0,0.228840068396924,0.453692771289717,1.08806040407946,0.591420599958536,1.27437413730962,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0.406870733204662,0,0.537052785212442,0.464033759878494,1.99047944349308,1.20008329398946,1.03018711554838,0.336749488765919,0,0,4.93215660162329,1.56596575179127,0,0,0.489473409012935,0,3.08801447160972,0,0,0.964570191354574,0.337884881306145,0.256241518587947,0,0,0.829550616910385,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0.422624246717254,1.39991177098451,0,0,0,0,0.139879507719444,0.622077260032973,0,0.107824811396682,0,0.109209638192014,0.33946505990805,0.212574920101683,0.743614585554013,0,0.954013051960256,0.315446980005013,0,0,1.531227386766,1.60573062741149,0,1.27707087245721,0.615349092722265,0.756215088665154,0.829887029570615,2.09918339321406,1.42769420259154,0.0981477185010256,0,0.733714394086716,0.231051332300676,0,0,0,2.78278214892252,0,0,0,0.327543835020193,0,1.35075169236789,0.781078098613847,0.206686796501184,0.760989722326882,1.09394961803644,0.548257766857182,1.48863353516788,0,0.383287282918786,0.535701835878287,0.336283722218824,0,0.455324382702595,1.77404740325278,0.115233987555779,0.171488009437418,1.4953341254903,1.05236437700559,0,1.00108261702862,3.29670989972159,0.471346769748006,0,1.82631744101899,0.431855182437243,0,2.00134323694638,1.42212250559454,10.8104525592356,0,0,0.62164849248911,0.17071847709395,1.38251932362818,0,1.18332000730565,1.19298766662821,1.27016115057279,0,0,0,0,0,1.09726132484042,0,0.410651227424988,0,0.485710993059139,0.233939463462106,0.397901550322736,0.237840181555137,0.11294608203896,1.42922671769058,0,0.308696632431779,0.874238242015829,3.76253837089218,2.45148321753905,0.707029641304878,1.76677620403451,0.297046400327086,0,0.339854229375634,3.47740496525458,4.38313638220325,0,0,0,0,0,1.37618785021362,0.286679166302903,0.631086248772738,1.22384682343646,0,0.5290268405154,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0.275684698604535,0,4.77405798774908,3.7514978221865,0,0.930896962757057,0.426467963801962,0.476128862927481,2.58355639344024,2.85543685760946,1.79410980128981,1.2729431655633,1.81905470062397,1.52401723527873,0.342233301085281,1.88585748440845,1.36272190246085,0.99798106963804,0.976839223331694,0.320182037633146,0,4.22178449900958,2.34640942403454,3.66724332548599,0.406896178315738,1.33151354837103,2.41528552309231,1.60284246151616 | |||
|short_description=p8@AES | |||
}} |
Latest revision as of 04:20, 17 September 2015
Short description: | p8@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AES_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -28bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.17e-17 | 53 |
common lymphoid progenitor | 6.17e-17 | 53 |
lymphoid lineage restricted progenitor cell | 9.68e-17 | 52 |
mature alpha-beta T cell | 3.01e-15 | 18 |
alpha-beta T cell | 3.01e-15 | 18 |
immature T cell | 3.01e-15 | 18 |
mature T cell | 3.01e-15 | 18 |
immature alpha-beta T cell | 3.01e-15 | 18 |
T cell | 7.17e-12 | 25 |
pro-T cell | 7.17e-12 | 25 |
CD8-positive, alpha-beta T cell | 3.27e-11 | 11 |
B cell | 1.97e-10 | 14 |
CD4-positive, alpha-beta T cell | 5.36e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.17e-10 | 114 |
blood | 6.34e-08 | 15 |
haemolymphatic fluid | 6.34e-08 | 15 |
organism substance | 6.34e-08 | 15 |