FFCP PHASE1:Hg19::chr19:3061488..3061514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |||
|TSSclassifier=strong | |||
|UniProt=Q08117 | |||
|association_with_transcript=-242bp_to_X73358_5end | |||
|cluster_id=chr19:3061488..3061514,- | |||
|description=CAGE_peak_10_at_AES_5end | |||
|id=chr19:3061488..3061514,- | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-12!180;CL:0000393!6.62e-10!60;CL:0000211!6.62e-10!60;CL:0000183!1.36e-09!59;CL:0000192!3.36e-09!42;CL:0000514!3.36e-09!42;CL:0000359!3.88e-09!32;CL:0000680!7.52e-09!57;CL:0000056!7.52e-09!57;CL:0000355!7.52e-09!57;CL:0000187!1.18e-08!54;CL:0000222!2.97e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.71e-09;32!CL:0000192;2.07e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.05e-10,32;CL:0000192,2.27e-09,43;CL:0000514,2.27e-09,43;CL:0000393,1.61e-07,61;CL:0000211,1.61e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!6.30e-13!60;UBERON:0007500!6.30e-13!60;UBERON:0004537!6.30e-13!60;UBERON:0006965!6.30e-13!60;UBERON:0001637!1.28e-12!42;UBERON:0003509!1.28e-12!42;UBERON:0004572!1.28e-12!42;UBERON:0004872!4.65e-11!84;UBERON:0000055!8.40e-11!69;UBERON:0000475!3.85e-10!365;UBERON:0000486!4.35e-10!82;UBERON:0000914!4.79e-10!83;UBERON:0002329!4.79e-10!83;UBERON:0003077!4.79e-10!83;UBERON:0003059!4.79e-10!83;UBERON:0007282!4.79e-10!83;UBERON:0009618!4.79e-10!83;UBERON:0007285!4.79e-10!83;UBERON:0002049!7.53e-10!79;UBERON:0007798!7.53e-10!79;UBERON:0004573!1.68e-09!33;UBERON:0004571!1.68e-09!33;UBERON:0004290!2.63e-09!70;UBERON:0000483!1.28e-08!309;UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0004111!2.08e-08!241;UBERON:0000119!2.48e-08!312;UBERON:0001134!2.71e-08!61;UBERON:0002036!2.71e-08!61;UBERON:0003082!2.71e-08!61;UBERON:0000025!5.27e-08!194;UBERON:0001017!7.65e-08!82;UBERON:0000477!1.12e-07!286;UBERON:0005743!1.98e-07!86;UBERON:0000924!2.05e-07!173;UBERON:0006601!2.05e-07!173;UBERON:0004121!2.94e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.52e-09;42!UBERON:0003509;6.52e-09;42!UBERON:0004572;6.52e-09;42!UBERON:0004573;1.71e-08;33!UBERON:0004571;1.71e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.71e-14,42;UBERON:0003509,6.71e-14,42;UBERON:0004572,6.71e-14,42;UBERON:0007500,3.45e-13,59;UBERON:0001981,3.45e-13,59;UBERON:0004537,3.45e-13,59;UBERON:0006965,3.45e-13,59;UBERON:0000055,5.35e-11,68;UBERON:0004573,2.10e-10,33;UBERON:0004571,2.10e-10,33;UBERON:0004872,1.72e-09,83;UBERON:0002049,4.47e-09,78;UBERON:0007798,4.47e-09,78;UBERON:0000486,1.03e-07,83;UBERON:0004111,1.45e-07,240;UBERON:0000025,2.18e-07,192;UBERON:0003077,3.98e-07,72;UBERON:0007285,3.98e-07,72;UBERON:0010314,5.31e-07,132;UBERON:0002329,5.48e-07,71;UBERON:0003059,5.48e-07,71;UBERON:0007282,5.48e-07,71;UBERON:0004290,5.48e-07,71;UBERON:0009618,5.48e-07,71;UBERON:0007524,7.20e-07,73;UBERON:0007503,7.23e-07,78 | |||
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| |||
|short_description=p10@AES | |||
}} |
Latest revision as of 04:23, 17 September 2015
Short description: | p10@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | -242bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.05e-10 | 32 |
smooth muscle cell | 2.27e-09 | 43 |
smooth muscle myoblast | 2.27e-09 | 43 |
electrically responsive cell | 1.61e-07 | 61 |
electrically active cell | 1.61e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 6.71e-14 | 42 |
arterial blood vessel | 6.71e-14 | 42 |
arterial system | 6.71e-14 | 42 |
epithelial tube open at both ends | 3.45e-13 | 59 |
blood vessel | 3.45e-13 | 59 |
blood vasculature | 3.45e-13 | 59 |
vascular cord | 3.45e-13 | 59 |
vessel | 5.35e-11 | 68 |
systemic artery | 2.10e-10 | 33 |
systemic arterial system | 2.10e-10 | 33 |
splanchnic layer of lateral plate mesoderm | 1.72e-09 | 83 |
vasculature | 4.47e-09 | 78 |
vascular system | 4.47e-09 | 78 |
multilaminar epithelium | 1.03e-07 | 83 |
anatomical conduit | 1.45e-07 | 240 |
tube | 2.18e-07 | 192 |
paraxial mesoderm | 3.98e-07 | 72 |
presumptive paraxial mesoderm | 3.98e-07 | 72 |
structure with developmental contribution from neural crest | 5.31e-07 | 132 |
somite | 5.48e-07 | 71 |
presomitic mesoderm | 5.48e-07 | 71 |
presumptive segmental plate | 5.48e-07 | 71 |
dermomyotome | 5.48e-07 | 71 |
trunk paraxial mesoderm | 5.48e-07 | 71 |
dense mesenchyme tissue | 7.20e-07 | 73 |
epithelial vesicle | 7.23e-07 | 78 |