FFCP PHASE1:Hg19::chr8:82644522..82644557,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:82644522..82644557,-
|short_description=p4@ZFAND1
|description=CAGE_peak_4_at_ZFAND1_5end
|association_with_transcript=22bp_to_ENST00000520604_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79752 | |EntrezGene=79752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25858 | |HGNC=25858 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK75 | |UniProt=E5RK75 | ||
|association_with_transcript=22bp_to_ENST00000520604_5end | |||
|cluster_id=chr8:82644522..82644557,- | |||
|coexpression_cluster_id=C2015 | |||
|description=CAGE_peak_4_at_ZFAND1_5end | |||
|id=chr8:82644522..82644557,- | |||
|ontology_enrichment_celltype=CL:0000066!1.22e-33!254;CL:0000223!9.26e-18!59;CL:0002076!1.88e-16!43;CL:0002251!1.64e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.50e-10;3!CL:0000082;3.88e-09;19!CL:0002251;5.99e-09;20!CL:0002076;7.56e-08;42!CL:0000083;8.35e-08;4!CL:0000039;3.01e-07;7!CL:0000586;3.01e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.93e-23,253;CL:0000223,3.32e-13,58;CL:0002178,1.01e-10,3;CL:0002076,7.57e-10,42;CL:0000082,3.54e-09,19;CL:0002251,4.78e-09,20;CL:0000083,1.08e-07,4;CL:0000039,3.82e-07,7;CL:0000586,3.82e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.12e-12;30!CL:0000223;2.14e-07;58 | |||
|ontology_enrichment_disease=DOID:305!2.09e-45!106;DOID:0050687!1.47e-41!143;DOID:162!2.65e-25!235;DOID:14566!3.72e-24!239;DOID:1749!1.55e-12!14;DOID:299!2.40e-12!25;DOID:3119!1.97e-09!14;DOID:0050615!5.62e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.39e-17;14!DOID:0050615;2.93e-14;16!DOID:305;5.90e-14;106!DOID:1324;6.21e-12;15!DOID:299;1.54e-10;25!DOID:3119;3.29e-10;14!DOID:0050687;5.85e-09;143!DOID:3905;1.22e-08;9!DOID:1793;8.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-42,106;DOID:0050687,6.62e-36,143;DOID:162,1.39e-24,235;DOID:14566,8.09e-24,239;DOID:1749,3.29e-17,14;DOID:0050615,2.58e-14,16;DOID:1324,5.51e-12,15;DOID:299,1.11e-10,25;DOID:3119,3.23e-10,14;DOID:3905,1.46e-08,9;DOID:0050686,5.99e-08,137;DOID:1793,1.08e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.87e-18!169;UBERON:0000925!3.87e-18!169;UBERON:0006595!3.87e-18!169;UBERON:0001007!6.04e-15!155;UBERON:0001555!6.04e-15!155;UBERON:0007026!6.04e-15!155;UBERON:0004921!1.15e-12!129;UBERON:0004185!1.15e-12!129;UBERON:0000077!1.38e-12!130;UBERON:0000344!2.65e-11!12;UBERON:0005911!1.32e-09!82;UBERON:0001041!8.36e-09!98;UBERON:0001004!9.74e-08!72;UBERON:0005153!2.97e-07!37;UBERON:0005795!6.13e-07!22;UBERON:0003729!6.23e-07!5;UBERON:0005409!6.83e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;3.88e-09;19!UBERON:0000115;3.88e-09;19!UBERON:0002048;1.03e-07;22!UBERON:0004807;1.03e-07;22!UBERON:0000117;1.03e-07;22!UBERON:0000171;1.03e-07;22!UBERON:0000170;1.03e-07;22!UBERON:0003343;1.21e-07;4!UBERON:0004785;1.21e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,3.54e-09,19;UBERON:0000115,3.54e-09,19;UBERON:0004119,2.85e-08,160;UBERON:0000925,2.85e-08,160;UBERON:0006595,2.85e-08,160;UBERON:0005153,4.98e-08,37;UBERON:0002048,9.56e-08,22;UBERON:0000117,9.56e-08,22;UBERON:0000171,9.56e-08,22;UBERON:0000170,9.56e-08,22;UBERON:0005597,9.56e-08,22;UBERON:0000118,9.56e-08,22;UBERON:0003343,9.64e-08,4;UBERON:0004785,9.64e-08,4;UBERON:0004921,2.29e-07,118;UBERON:0001007,2.82e-07,145;UBERON:0001555,2.82e-07,145;UBERON:0007026,2.82e-07,145 | |||
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| ||
|short_description=p4@ZFAND1 | |||
}} | }} |
Latest revision as of 06:29, 19 September 2015
Short description: | p4@ZFAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZFAND1_5end |
Coexpression cluster: | C2015_small_squamous_amniotic_rectal_malignant_maxillary_oral |
Association with transcript: | 22bp_to_ENST00000520604_5end |
EntrezGene: | ZFAND1 |
HGNC: | 25858 |
UniProt: | E5RK75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.93e-23 | 253 |
endodermal cell | 3.32e-13 | 58 |
epithelial cell of stomach | 1.01e-10 | 3 |
endo-epithelial cell | 7.57e-10 | 42 |
epithelial cell of lung | 3.54e-09 | 19 |
epithelial cell of alimentary canal | 4.78e-09 | 20 |
epithelial cell of pancreas | 1.08e-07 | 4 |
germ line cell | 3.82e-07 | 7 |
germ cell | 3.82e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 3.54e-09 | 19 |
lung epithelium | 3.54e-09 | 19 |
endoderm-derived structure | 2.85e-08 | 160 |
endoderm | 2.85e-08 | 160 |
presumptive endoderm | 2.85e-08 | 160 |
epithelial bud | 4.98e-08 | 37 |
lung | 9.56e-08 | 22 |
respiratory tube | 9.56e-08 | 22 |
respiration organ | 9.56e-08 | 22 |
pair of lungs | 9.56e-08 | 22 |
lung primordium | 9.56e-08 | 22 |
lung bud | 9.56e-08 | 22 |
mucosa of oral region | 9.64e-08 | 4 |
respiratory system mucosa | 9.64e-08 | 4 |
subdivision of digestive tract | 2.29e-07 | 118 |
digestive system | 2.82e-07 | 145 |
digestive tract | 2.82e-07 | 145 |
primitive gut | 2.82e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-42 | 106 |
cell type cancer | 6.62e-36 | 143 |
cancer | 1.39e-24 | 235 |
disease of cellular proliferation | 8.09e-24 | 239 |
squamous cell carcinoma | 3.29e-17 | 14 |
respiratory system cancer | 2.58e-14 | 16 |
lung cancer | 5.51e-12 | 15 |
adenocarcinoma | 1.11e-10 | 25 |
gastrointestinal system cancer | 3.23e-10 | 14 |
lung carcinoma | 1.46e-08 | 9 |
organ system cancer | 5.99e-08 | 137 |
pancreatic cancer | 1.08e-07 | 4 |