FFCP PHASE1:Hg19::chr1:145589059..145589070,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26618 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000498192_5end | |||
|cluster_id=chr1:145589059..145589070,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_NUDT17_5end | |||
|id=chr1:145589059..145589070,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;8.96e-37;3!CL:0002363;4.75e-24;2!CL:0000451;1.71e-10;10!CL:0000650;4.29e-07;2!CL:1000500;4.29e-07;2!CL:1000618;4.29e-07;2!CL:1001318;4.29e-07;2!CL:0002561;4.29e-07;2!CL:0002173;4.29e-07;2!CL:0002598;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.98e-37,3;CL:0002363,6.02e-24,2;CL:0000008,6.02e-24,2;CL:0000451,1.71e-10,10;CL:0002598,3.48e-07,2;CL:0002561,4.17e-07,2;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;4.75e-24;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;4.29e-07;2!DOID:1907;4.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,3.70e-07,2;DOID:1907,3.70e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.49e-26;4!UBERON:0003566;4.75e-24;2!UBERON:0001777;4.75e-24;2!UBERON:0000964;1.56e-12;4!UBERON:0010409;1.56e-12;4!UBERON:0003567;4.29e-07;2!UBERON:0003838;4.29e-07;2!UBERON:0003586;4.29e-07;2!UBERON:0005169;4.29e-07;2!UBERON:0005933;4.29e-07;2!UBERON:0002321;4.29e-07;2!UBERON:0005942;4.29e-07;2!UBERON:0005215;4.29e-07;2!UBERON:0002303;4.29e-07;2!UBERON:0002319;4.29e-07;2!UBERON:0005932;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,2.63e-26,4;UBERON:0003566,6.02e-24,2;UBERON:0001777,6.02e-24,2;UBERON:0000964,1.75e-12,4;UBERON:0010409,1.75e-12,4;UBERON:0004348,1.75e-12,4;UBERON:0005427,1.75e-12,4;UBERON:0005933,4.17e-07,2;UBERON:0005942,4.17e-07,2;UBERON:0005932,4.17e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0,0,1.02000345622126,0,0,0.273748850145768,0,0,0.0821005894499457,0,0,0.383829398097213,0,0,0,0,0.46480320348181,0.284338464974843,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,6.43924685624423,9.15191857248205,4.45749001595478,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.937285727335186,0,0,0.298897361103602,0,0,0,0.408308342509787,0.245668634623536,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0,0.113432183160021,0,0,0.423863802319124,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,1.3032332212413,1.03993478527958,0,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0,0,0,0,0,0,0.514414748524284,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.630809660135739,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.647747748306418,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0.744316738719335,0,0.190630193923825,1.79128453917934,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,1.92495971052672,0,0.185803175125719,0.144269212976445,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0.728341138602278,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0.673498977531838,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0,0.233939463462106,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,2.53397002022874,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@NUDT17 | |||
}} |
Latest revision as of 18:44, 16 September 2015
Short description: | p3@NUDT17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUDT17_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 26bp_to_ENST00000498192_5end |
EntrezGene: | NUDT17 |
HGNC: | 26618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.98e-37 | 3 |
keratocyte | 6.02e-24 | 2 |
migratory cranial neural crest cell | 6.02e-24 | 2 |
dendritic cell | 1.71e-10 | 10 |
bronchial smooth muscle cell | 3.48e-07 | 2 |
outer root sheath cell | 4.17e-07 | 2 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 2.63e-26 | 4 |
head connective tissue | 6.02e-24 | 2 |
substantia propria of cornea | 6.02e-24 | 2 |
cornea | 1.75e-12 | 4 |
eye surface | 1.75e-12 | 4 |
optic eminence | 1.75e-12 | 4 |
corneal primordium | 1.75e-12 | 4 |
hair root sheath | 4.17e-07 | 2 |
hair outer root sheath | 4.17e-07 | 2 |
bulb of hair follicle | 4.17e-07 | 2 |
abdomen connective tissue | 5.60e-07 | 2 |
abdominal segment connective tissue | 5.60e-07 | 2 |
trunk connective tissue | 5.60e-07 | 2 |
interstitial tissue | 5.60e-07 | 2 |
extraglomerular mesangium | 5.60e-07 | 2 |
kidney interstitium | 5.60e-07 | 2 |
juxtaglomerular apparatus | 5.60e-07 | 2 |
mesangium | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 3.70e-07 | 2 |
malignant fibroxanthoma | 3.70e-07 | 2 |