FFCP PHASE1:Hg19::chr8:95229479..95229490,-: Difference between revisions
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|id=chr8:95229479..95229490,-
|short_description=p3@CDH17
|description=CAGE_peak_3_at_CDH17_5end
|association_with_transcript=40bp_to_ENST00000450165,NM_001144663,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1015 | |EntrezGene=1015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1756 | |HGNC=1756 | ||
|TSSclassifier=strong | |||
|UniProt=Q12864,B2R778 | |UniProt=Q12864,B2R778 | ||
|association_with_transcript=40bp_to_ENST00000450165,NM_001144663,uc011lgp.1_5end | |||
|cluster_id=chr8:95229479..95229490,- | |||
|description=CAGE_peak_3_at_CDH17_5end | |||
|id=chr8:95229479..95229490,- | |||
|ontology_enrichment_celltype=CL:0002127!9.57e-12!1;CL:0000914!9.57e-12!1;CL:0000911!9.57e-12!1;CL:0000814!9.57e-12!1;CL:0002042!9.57e-12!1;CL:0002039!9.57e-12!1;CL:0002040!9.57e-12!1;CL:0002041!9.57e-12!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.58e-34;1!CL:0000911;2.58e-34;1!CL:0000814;2.58e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.58e-34,1;CL:0000914,2.58e-34,1;CL:0000911,2.58e-34,1;CL:0000814,2.58e-34,1;CL:0002042,2.58e-34,1;CL:0002039,2.58e-34,1;CL:0002040,2.58e-34,1;CL:0002041,2.58e-34,1;CL:0000893,6.48e-18,2;CL:0002489,6.48e-18,2;CL:0000809,6.48e-18,2;CL:0000808,6.48e-18,2;CL:0000894,6.48e-18,2;CL:0000806,6.48e-18,2;CL:0000807,6.48e-18,2;CL:0000805,6.48e-18,2;CL:0002425,6.48e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.61e-34;1!CL:0002425;6.48e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.16e-14!3;UBERON:0004854!6.16e-14!3;UBERON:0009034!6.16e-14!3;UBERON:0002095!6.16e-14!3;UBERON:0004782!6.16e-14!3;UBERON:0003281!6.16e-14!3;UBERON:0009664!6.16e-14!3;UBERON:0002296!6.16e-14!3;UBERON:0005602!6.16e-14!3;UBERON:0001179!6.16e-14!3;UBERON:0006293!6.16e-14!3;UBERON:0004177!2.24e-13!7;UBERON:0005409!6.00e-13!35;UBERON:0002079!1.06e-11!1;UBERON:0001154!1.78e-11!1;UBERON:0001153!1.78e-11!1;UBERON:0000989!1.97e-11!1;UBERON:0008811!1.97e-11!1;UBERON:0006258!1.97e-11!1;UBERON:0005876!1.97e-11!1;UBERON:0004874!1.97e-11!1;UBERON:0000029!2.18e-11!1;UBERON:0001736!2.42e-11!1;UBERON:0006298!2.42e-11!1;UBERON:0001301!3.63e-11!1;UBERON:0002372!4.01e-11!1;UBERON:0001961!4.01e-11!1;UBERON:0001744!4.01e-11!1;UBERON:0001735!4.01e-11!1;UBERON:0001155!1.10e-10!9;UBERON:0001042!1.36e-09!10;UBERON:0009145!1.36e-09!10;UBERON:0000160!5.93e-09!27;UBERON:0000059!7.78e-09!11;UBERON:0006562!9.13e-09!11;UBERON:0004457!7.24e-08!12;UBERON:0000042!7.24e-08!12;UBERON:0004921!1.17e-07!129;UBERON:0004185!1.17e-07!129;UBERON:0007023!2.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.61e-34;1!UBERON:0002081;7.67e-18;2!UBERON:0004151;2.31e-12;3!UBERON:0000160;2.70e-08;17!UBERON:0002108;7.01e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.61e-34,1;UBERON:0002081,7.67e-18,2;UBERON:0010227,7.67e-18,2;UBERON:0004151,2.31e-12,3;UBERON:0002370,1.22e-09,4;UBERON:0005058,1.22e-09,4;UBERON:0009113,1.22e-09,4;UBERON:0003295,1.22e-09,4;UBERON:0005562,1.22e-09,4;UBERON:0000160,2.61e-08,17;UBERON:0002108,6.55e-08,4;UBERON:0003351,7.58e-07,6 | |||
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|short_description=p3@CDH17 | |||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p3@CDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH17_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000450165, NM_001144663, uc011lgp.1_5end |
EntrezGene: | CDH17 |
HGNC: | 1756 |
UniProt: | Q12864B2R778 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.58e-34 | 1 |
immature NK T cell | 2.58e-34 | 1 |
effector T cell | 2.58e-34 | 1 |
mature NK T cell | 2.58e-34 | 1 |
immature NK T cell stage IV | 2.58e-34 | 1 |
immature NK T cell stage I | 2.58e-34 | 1 |
immature NK T cell stage II | 2.58e-34 | 1 |
immature NK T cell stage III | 2.58e-34 | 1 |
thymocyte | 6.48e-18 | 2 |
double negative thymocyte | 6.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 6.48e-18 | 2 |
DN4 thymocyte | 6.48e-18 | 2 |
DN1 thymic pro-T cell | 6.48e-18 | 2 |
DN2 thymocyte | 6.48e-18 | 2 |
DN3 thymocyte | 6.48e-18 | 2 |
immature single positive thymocyte | 6.48e-18 | 2 |
early T lineage precursor | 6.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.61e-34 | 1 |
cardiac atrium | 7.67e-18 | 2 |
future cardiac atrium | 7.67e-18 | 2 |
cardiac chamber | 2.31e-12 | 3 |
thymus | 1.22e-09 | 4 |
hemolymphoid system gland | 1.22e-09 | 4 |
thymic region | 1.22e-09 | 4 |
pharyngeal gland | 1.22e-09 | 4 |
thymus primordium | 1.22e-09 | 4 |
intestine | 2.61e-08 | 17 |
small intestine | 6.55e-08 | 4 |
pharyngeal epithelium | 7.58e-07 | 6 |