FFCP PHASE1:Hg19::chr1:158324656..158324678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1638 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-164bp_to_AK310567_5end | |||
|cluster_id=chr1:158324656..158324678,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_2_at_CD1E_5end | |||
|id=chr1:158324656..158324678,+ | |||
|ontology_enrichment_celltype=CL:0000840!1.04e-40!5;CL:0001029!1.04e-40!5;CL:0000990!2.60e-27!8;CL:0000451!1.98e-22!10;CL:0001014!8.09e-09!2;CL:0001016!8.09e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.86e-33;5!CL:0000990;1.82e-22;8!CL:0000451;1.58e-18;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.56e-33,5;CL:0001029,2.56e-33,5;CL:0000990,1.69e-22,8;CL:0000451,1.49e-18,10 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.45e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.90e-20!7;UBERON:0002370!1.31e-16!4;UBERON:0005058!1.31e-16!4;UBERON:0009113!1.31e-16!4;UBERON:0003295!1.31e-16!4;UBERON:0005562!1.31e-16!4;UBERON:0002134!1.93e-16!1;UBERON:0005208!1.93e-16!1;UBERON:0005946!1.93e-16!1;UBERON:0005965!1.93e-16!1;UBERON:0002078!1.93e-16!1;UBERON:0000974!1.47e-14!10;UBERON:0003351!2.13e-11!6;UBERON:0000341!6.42e-09!2;UBERON:0002081!6.94e-09!2;UBERON:0002133!6.94e-09!2;UBERON:0003127!8.74e-09!2;UBERON:0003408!3.44e-07!10;UBERON:0001042!3.44e-07!10;UBERON:0009145!3.44e-07!10;UBERON:0002390!8.09e-07!102;UBERON:0003061!8.09e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.55e-45;2!UBERON:0005058;2.55e-45;2!UBERON:0009113;2.55e-45;2!UBERON:0004177;7.92e-19;5!UBERON:0005057;7.92e-19;5!UBERON:0000341;3.43e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.94e-23,4;UBERON:0005058,2.94e-23,4;UBERON:0009113,2.94e-23,4;UBERON:0003295,2.94e-23,4;UBERON:0005562,2.94e-23,4;UBERON:0000974,1.57e-20,10;UBERON:0003351,7.23e-16,6;UBERON:0004177,9.53e-14,7;UBERON:0005057,9.53e-14,7;UBERON:0000341,3.62e-12,2;UBERON:0003408,6.48e-10,10;UBERON:0001042,6.48e-10,10;UBERON:0009145,6.48e-10,10;UBERON:0006562,4.25e-09,11;UBERON:0009722,4.25e-09,11;UBERON:0007690,4.25e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92092654289215,3.13433527138681,5.31831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.9065599253381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19739683761629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3806443146374,77.7004585327153,38.424248149136,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,5.03184483977566,0 | |||
|short_description=p2@CD1E | |||
}} |
Latest revision as of 21:07, 17 September 2015
Short description: | p2@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD1E_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -164bp_to_AK310567_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.56e-33 | 5 |
common dendritic progenitor | 2.56e-33 | 5 |
conventional dendritic cell | 1.69e-22 | 8 |
dendritic cell | 1.49e-18 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.94e-23 | 4 |
hemolymphoid system gland | 2.94e-23 | 4 |
thymic region | 2.94e-23 | 4 |
pharyngeal gland | 2.94e-23 | 4 |
thymus primordium | 2.94e-23 | 4 |
neck | 1.57e-20 | 10 |
pharyngeal epithelium | 7.23e-16 | 6 |
hemopoietic organ | 9.53e-14 | 7 |
immune organ | 9.53e-14 | 7 |
throat | 3.62e-12 | 2 |
gland of gut | 6.48e-10 | 10 |
chordate pharynx | 6.48e-10 | 10 |
pharyngeal region of foregut | 6.48e-10 | 10 |
pharynx | 4.25e-09 | 11 |
entire pharyngeal arch endoderm | 4.25e-09 | 11 |
early pharyngeal endoderm | 4.25e-09 | 11 |