FFCP PHASE1:Hg19::chr8:96146132..96146155,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:96146132..96146155,+
|short_description=p2@PLEKHF2
|description=CAGE_peak_2_at_PLEKHF2_5end
|association_with_transcript=94bp_to_uc003yhn.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79666 | |EntrezGene=79666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20757 | |HGNC=20757 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8W4 | |UniProt=Q9H8W4 | ||
|association_with_transcript=94bp_to_uc003yhn.1_5end | |||
|cluster_id=chr8:96146132..96146155,+ | |||
|coexpression_cluster_id=C4783 | |||
|description=CAGE_peak_2_at_PLEKHF2_5end | |||
|id=chr8:96146132..96146155,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.65e-34!172;CL:0000566!1.65e-34!172;CL:0002032!3.06e-34!165;CL:0000837!3.06e-34!165;CL:0000763!1.13e-29!112;CL:0000049!1.13e-29!112;CL:0000988!1.86e-29!182;CL:0000738!5.05e-28!140;CL:0002031!1.54e-24!124;CL:0000766!1.69e-22!76;CL:0002087!3.62e-21!119;CL:0000839!8.23e-21!70;CL:0000557!9.22e-21!71;CL:0002009!7.56e-18!65;CL:0002194!3.18e-17!63;CL:0000576!3.18e-17!63;CL:0000040!3.18e-17!63;CL:0000559!3.18e-17!63;CL:0000860!1.26e-13!45;CL:0002057!1.98e-13!42;CL:0000945!1.74e-11!24;CL:0000826!1.74e-11!24;CL:0000236!3.61e-09!14;CL:0000063!1.50e-07!578;CL:0000066!3.27e-07!254;CL:0002076!4.50e-07!43;CL:0000223!5.61e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-13;39!CL:0000234;1.28e-13;39!CL:0000860;2.77e-13;33!CL:0002057;2.77e-13;33!CL:0000945;7.35e-12;24!CL:0000766;1.73e-09;69!CL:0000576;2.05e-09;48!CL:0000763;3.05e-09;100!CL:0000236;5.76e-09;13!CL:0000738;7.21e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.22e-35,168;CL:0002032,3.43e-35,161;CL:0000837,3.43e-35,161;CL:0000988,9.48e-31,177;CL:0000763,1.44e-30,108;CL:0000049,1.44e-30,108;CL:0000738,5.11e-29,136;CL:0002031,2.10e-25,120;CL:0000766,1.63e-23,72;CL:0002087,7.26e-22,115;CL:0000839,9.16e-22,66;CL:0000557,1.06e-21,67;CL:0002009,1.25e-18,61;CL:0002194,5.60e-18,59;CL:0000576,5.60e-18,59;CL:0000040,5.60e-18,59;CL:0000559,5.60e-18,59;CL:0000473,1.66e-16,48;CL:0000234,1.66e-16,48;CL:0000860,1.27e-13,42;CL:0002057,1.27e-13,42;CL:0000945,7.55e-12,24;CL:0000826,7.55e-12,24;CL:0000236,1.70e-09,14;CL:0002076,1.02e-07,42;CL:0000223,1.41e-07,58;CL:0000066,3.32e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-10;42!CL:0000049;2.86e-08;108 | |||
|ontology_enrichment_disease=DOID:305!8.19e-08!106;DOID:162!2.98e-07!235;DOID:14566!6.16e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.13e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-18!102;UBERON:0003061!1.79e-18!102;UBERON:0002193!8.90e-17!112;UBERON:0002371!1.13e-15!80;UBERON:0001474!6.00e-15!86;UBERON:0002405!1.18e-12!115;UBERON:0004765!8.32e-11!101;UBERON:0001434!8.32e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.37e-19,98;UBERON:0003061,4.37e-19,98;UBERON:0002193,1.45e-17,108;UBERON:0002371,1.99e-16,76;UBERON:0001474,2.84e-15,82;UBERON:0002405,6.60e-15,93;UBERON:0004765,8.71e-14,90;UBERON:0001434,6.31e-10,100 | |||
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| ||
|short_description=p2@PLEKHF2 | |||
}} | }} |
Latest revision as of 13:52, 19 September 2015
Short description: | p2@PLEKHF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEKHF2_5end |
Coexpression cluster: | C4783_CD14_CD19_breast_Burkitt_chronic_Mast_gall |
Association with transcript: | 94bp_to_uc003yhn.1_5end |
EntrezGene: | PLEKHF2 |
HGNC: | 20757 |
UniProt: | Q9H8W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.22e-35 | 168 |
hematopoietic oligopotent progenitor cell | 3.43e-35 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-35 | 161 |
hematopoietic cell | 9.48e-31 | 177 |
myeloid cell | 1.44e-30 | 108 |
common myeloid progenitor | 1.44e-30 | 108 |
leukocyte | 5.11e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 2.10e-25 | 120 |
myeloid leukocyte | 1.63e-23 | 72 |
nongranular leukocyte | 7.26e-22 | 115 |
myeloid lineage restricted progenitor cell | 9.16e-22 | 66 |
granulocyte monocyte progenitor cell | 1.06e-21 | 67 |
macrophage dendritic cell progenitor | 1.25e-18 | 61 |
monopoietic cell | 5.60e-18 | 59 |
monocyte | 5.60e-18 | 59 |
monoblast | 5.60e-18 | 59 |
promonocyte | 5.60e-18 | 59 |
defensive cell | 1.66e-16 | 48 |
phagocyte | 1.66e-16 | 48 |
classical monocyte | 1.27e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-13 | 42 |
lymphocyte of B lineage | 7.55e-12 | 24 |
pro-B cell | 7.55e-12 | 24 |
B cell | 1.70e-09 | 14 |
endo-epithelial cell | 1.02e-07 | 42 |
endodermal cell | 1.41e-07 | 58 |
epithelial cell | 3.32e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.37e-19 | 98 |
blood island | 4.37e-19 | 98 |
hemolymphoid system | 1.45e-17 | 108 |
bone marrow | 1.99e-16 | 76 |
bone element | 2.84e-15 | 82 |
immune system | 6.60e-15 | 93 |
skeletal element | 8.71e-14 | 90 |
skeletal system | 6.31e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.13e-07 | 106 |