FFCP PHASE1:Hg19::chr1:173174664..173174677,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7292 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11934 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IV74 | |||
|association_with_transcript=19bp_to_ENST00000367718,uc001giv.2_5end | |||
|cluster_id=chr1:173174664..173174677,- | |||
|coexpression_cluster_id=C725 | |||
|description=CAGE_peak_6_at_TNFSF4_5end | |||
|id=chr1:173174664..173174677,- | |||
|ontology_enrichment_celltype=CL:0002139!1.25e-09!24;CL:0000222!9.44e-08!119;CL:0000071!1.93e-07!18;CL:0002546!1.93e-07!18;CL:0000115!4.30e-07!35 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.95e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!1.93e-19!110;UBERON:0001009!1.68e-18!113;UBERON:0000178!3.65e-16!15;UBERON:0000179!3.65e-16!15;UBERON:0000463!3.65e-16!15;UBERON:0000055!1.42e-11!69;UBERON:0002049!1.17e-10!79;UBERON:0007798!1.17e-10!79;UBERON:0001981!1.68e-10!60;UBERON:0007500!1.68e-10!60;UBERON:0004537!1.68e-10!60;UBERON:0006965!1.68e-10!60;UBERON:0004872!2.57e-09!84;UBERON:0001637!4.83e-08!42;UBERON:0003509!4.83e-08!42;UBERON:0004572!4.83e-08!42;UBERON:0001986!1.93e-07!18;UBERON:0004638!1.93e-07!18;UBERON:0004852!1.93e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-36;15!UBERON:0000179;3.28e-36;15!UBERON:0000463;3.28e-36;15!UBERON:0002390;5.54e-17;32!UBERON:0002193;5.95e-10;42!UBERON:0000478;2.23e-07;24!UBERON:0002331;5.30e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.37e-36,15;UBERON:0000179,2.37e-36,15;UBERON:0000463,2.37e-36,15;UBERON:0004535,1.35e-14,109;UBERON:0001009,4.71e-14,112;UBERON:0003081,1.64e-07,203;UBERON:0000478,2.12e-07,24;UBERON:0002331,5.31e-07,10;UBERON:0000358,5.31e-07,10;UBERON:0000307,5.31e-07,10;UBERON:0000091,5.31e-07,10;UBERON:0000087,5.31e-07,10;UBERON:0007010,5.31e-07,10;UBERON:0007806,5.31e-07,10;UBERON:0008780,5.31e-07,10;UBERON:0005728,5.31e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,1.46062018077475,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.328402357799783,0.236132343941038,0.393364276848904,0.767658796194425,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,2.38514888840046,0,1.38856200643038,1.13061588384802,0.419499436209906,0,0.835979866147242,0.516833518338658,1.42306505074684,0.66944122552934,0.402829317109147,0,0,0.735326160691737,0,0.714397826272638,0,0.450445921933289,0,0.949265659568129,1.46561395144326,1.31780417436063,0,0,0.496971951695318,0.633152558322899,0.926864265692532,0,0,0,3.20246987189115,0,0,0.942974704487816,0,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,4.42385514324082,2.15267562826634,9.8236398856541,0,0,0.515262646192195,2.83404594050192,3.53622027030021,0,0,0,0.552299391853796,0,0.355009592516614,3.22406714328449,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,18.7212030400459,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,7.88557466122444,0,0,2.6593811658487,2.08014873822732,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,0,0,0,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0.803701137152247,0.728364672026868,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,1.00187420719394,0,0,1.5250415513906,0,0,0,0.78494864019923,0.899362287916574,0.274537029736055,0,0.202182481573316,1.58510321173008,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,2.15117028306077,0.294747123039363,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,5.07447609232169,2.29391162142713,1.70894156152249,2.1440859791201,3.29089818468955,3.8908398671563,3.7802200606668,1.58625035258854,0,0,0,0,0.28853842595289,0,0.159426272728822,1.79621434289535,0,2.32840940996271,0,0.280797178113459,1.82587743226554,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,6.22079175323615,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74035427463538,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52346483097368,13.3449054062223,8.6670218089528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,3.94122197613481,3.13808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,5.76479813667846,0,0,0,0.13480708770837,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,0.621051827505038,0,4.51930914748591,2.60872530905867,0.300515217994437,3.80805212168795,3.25496586563729,0,0.966695013382396,0,13.5352602157529,5.60038870528415,0,0,0,0,0,0,0,0,0,0.537266523244462,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,1.34064966502131,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30165200803622,2.13033511897894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TNFSF4 | |||
}} |
Latest revision as of 17:24, 18 September 2015
Short description: | p6@TNFSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFSF4_5end |
Coexpression cluster: | C725_Mast_cord_mycosis_mesenchymal_Endothelial_hepatic_Mesenchymal |
Association with transcript: | 19bp_to_ENST00000367718, uc001giv.2_5end |
EntrezGene: | TNFSF4 |
HGNC: | 11934 |
UniProt: | Q8IV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.37e-36 | 15 |
haemolymphatic fluid | 2.37e-36 | 15 |
organism substance | 2.37e-36 | 15 |
cardiovascular system | 1.35e-14 | 109 |
circulatory system | 4.71e-14 | 112 |
lateral plate mesoderm | 1.64e-07 | 203 |
extraembryonic structure | 2.12e-07 | 24 |
umbilical cord | 5.31e-07 | 10 |
blastocyst | 5.31e-07 | 10 |
blastula | 5.31e-07 | 10 |
bilaminar disc | 5.31e-07 | 10 |
inner cell mass | 5.31e-07 | 10 |
cleaving embryo | 5.31e-07 | 10 |
connecting stalk | 5.31e-07 | 10 |
inner cell mass derived epiblast | 5.31e-07 | 10 |
extraembryonic mesoderm | 5.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.15e-07 | 14 |