FFCP PHASE1:Hg19::chr1:198203826..198203841,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:198203826..198203841,+ | |||
|description=CAGE_peak_at_chr1:198203826..198203841,+ | |||
|id=chr1:198203826..198203841,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.30e-15!19;CL:0000222!1.70e-09!119;CL:0000213!7.49e-07!57;CL:0000215!7.49e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002593;1.21e-24;2!CL:0000077;2.73e-15;19!CL:0000511;6.42e-13;1!CL:0002625;6.42e-13;1!CL:0002557;6.42e-13;1!CL:0000216;6.42e-13;1!CL:0002595;1.90e-10;5!CL:0002545;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.08e-24,2;CL:0000077,2.17e-15,19;CL:0000511,4.23e-13,1;CL:0002625,4.23e-13,1;CL:0000216,4.23e-13,1;CL:0002557,8.64e-13,1;CL:0002595,2.35e-10,5;CL:0002545,5.28e-07,2;CL:0000213,6.82e-07,58;CL:0000215,6.82e-07,58;CL:0000222,9.45e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.94e-11;10 | |||
|ontology_enrichment_disease=DOID:0060072!6.79e-08!4;DOID:0060084!7.89e-07!3;DOID:127!7.89e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.40e-36;3!DOID:127;5.40e-36;3!DOID:0060072;3.45e-27;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.98e-36,3;DOID:127,2.98e-36,3;DOID:0060072,2.21e-27,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.07e-09!42;UBERON:0003509!8.07e-09!42;UBERON:0004572!8.07e-09!42;UBERON:0004872!5.06e-08!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.21e-24;2!UBERON:0001136;6.42e-13;1!UBERON:0001343;6.42e-13;1!UBERON:0004910;6.42e-13;1!UBERON:0004813;6.42e-13;1!UBERON:0003834;1.90e-10;5!UBERON:0001533;1.90e-10;5!UBERON:0004573;1.62e-08;33!UBERON:0004571;1.62e-08;33!UBERON:0001637;4.45e-08;42!UBERON:0003509;4.45e-08;42!UBERON:0004572;4.45e-08;42!UBERON:0003513;1.04e-07;7!UBERON:0005800;4.29e-07;2!UBERON:0000078;4.29e-07;2!UBERON:0004909;4.29e-07;2!UBERON:0001515;4.29e-07;2!UBERON:0002012;4.29e-07;2!UBERON:0008886;4.29e-07;2!UBERON:0000995;7.85e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.08e-24,2;UBERON:0001136,4.23e-13,1;UBERON:0001343,4.23e-13,1;UBERON:0004910,4.23e-13,1;UBERON:0005154,4.23e-13,1;UBERON:0005295,4.23e-13,1;UBERON:0004813,4.23e-13,1;UBERON:0005297,4.23e-13,1;UBERON:0005294,4.23e-13,1;UBERON:0010141,4.23e-13,1;UBERON:0005891,4.23e-13,1;UBERON:0003834,2.35e-10,5;UBERON:0001533,2.35e-10,5;UBERON:0001637,1.30e-09,42;UBERON:0003509,1.30e-09,42;UBERON:0004572,1.30e-09,42;UBERON:0004573,9.12e-09,33;UBERON:0004571,9.12e-09,33;UBERON:0004872,4.18e-08,83;UBERON:0003513,1.21e-07,7;UBERON:0004909,3.48e-07,2;UBERON:0000078,4.98e-07,2;UBERON:0007497,4.98e-07,2;UBERON:0003643,4.98e-07,2;UBERON:0003504,4.98e-07,2;UBERON:0003469,4.98e-07,2;UBERON:0003496,4.98e-07,2;UBERON:0002012,4.98e-07,2;UBERON:0008886,4.98e-07,2;UBERON:0007303,4.98e-07,2;UBERON:0002061,4.98e-07,2;UBERON:0005432,4.98e-07,2;UBERON:0004363,4.98e-07,2;UBERON:0005800,5.28e-07,2;UBERON:0001515,5.28e-07,2;UBERON:0007500,9.90e-07,59;UBERON:0001981,9.90e-07,59;UBERON:0004537,9.90e-07,59;UBERON:0006965,9.90e-07,59 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0,1.10298924103761,0,0,0,0,0,0,0,0,0,0,0,1.13967460498122,0.926864265692532,0.286836620748814,0,0,0,0,1.24484414159907,0.134710672069688,0.817309515567294,0.605429710579726,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,1.13432183160021,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,3.4486426652716,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.51336800074665,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,2.15623506123262,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0.95460974377781,0,0,0,0,0.202182481573316,0,0,0,8.04254515783239,1.05650146756755,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60199442455198,2.5926644736038,1.63293680054705,0,0,0.681552087141687,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.50313580350515,0,0.228840068396924,0.453692771289717,0.310874401165561,0.147855149989634,0.318593534327405,0,0,2.07353103920428,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,1.56596575179127,0.226705925512272,0.463044948647668,0.97894681802587,1.4327107286519,0.617602894321944,0,0.353378291891762,1.15748422962549,7.60240982938827,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:198203826..198203841,+ | |||
}} |
Latest revision as of 01:53, 28 July 2015
Short description: | p@chr1:198203826..198203841, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198203826..198203841, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.08e-24 | 2 |
mesothelial cell | 2.17e-15 | 19 |
androgen binding protein secreting cell | 4.23e-13 | 1 |
seminiferous tubule epithelial cell | 4.23e-13 | 1 |
Sertoli cell | 4.23e-13 | 1 |
fibroblast of pulmonary artery | 8.64e-13 | 1 |
smooth muscle cell of the subclavian artery | 2.35e-10 | 5 |
thoracic aorta endothelial cell | 5.28e-07 | 2 |
lining cell | 6.82e-07 | 58 |
barrier cell | 6.82e-07 | 58 |
mesodermal cell | 9.45e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.98e-36 | 3 |
leiomyoma | 2.98e-36 | 3 |
benign neoplasm | 2.21e-27 | 4 |