FFCP PHASE1:Hg19::chr1:212738742..212738755,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=467 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=785 | |||
|TSSclassifier=strong | |||
|UniProt=P18847 | |||
|association_with_transcript=45bp_to_ENST00000366987,uc001hjf.2_5end | |||
|cluster_id=chr1:212738742..212738755,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ATF3_5end | |||
|id=chr1:212738742..212738755,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.74e-35!42;CL:0000860!6.17e-32!45;CL:0002009!1.81e-28!65;CL:0000557!5.54e-27!71;CL:0000766!5.08e-26!76;CL:0002194!1.26e-25!63;CL:0000576!1.26e-25!63;CL:0000040!1.26e-25!63;CL:0000559!1.26e-25!63;CL:0000839!8.46e-24!70;CL:0000763!4.50e-19!112;CL:0000049!4.50e-19!112;CL:0000738!2.87e-18!140;CL:0002031!1.99e-16!124;CL:0002087!2.96e-15!119;CL:0002032!1.09e-13!165;CL:0000837!1.09e-13!165;CL:0000037!1.74e-13!172;CL:0000566!1.74e-13!172;CL:0000988!4.10e-12!182;CL:0002541!1.96e-07!3;CL:0000767!9.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.08e-69;33!CL:0002057;3.08e-69;33!CL:0000473;1.01e-60;39!CL:0000234;1.01e-60;39!CL:0000576;3.33e-32;48!CL:0000766;4.83e-20;69!CL:0000763;4.23e-09;100!CL:0002541;1.10e-08;3!CL:0002087;2.55e-08;104!CL:0000738;6.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.29e-61,48;CL:0000234,1.29e-61,48;CL:0000860,9.42e-59,42;CL:0002057,9.42e-59,42;CL:0002009,6.24e-51,61;CL:0002194,2.38e-48,59;CL:0000576,2.38e-48,59;CL:0000040,2.38e-48,59;CL:0000559,2.38e-48,59;CL:0000557,5.24e-46,67;CL:0000839,8.39e-43,66;CL:0000766,6.80e-39,72;CL:0000763,7.52e-27,108;CL:0000049,7.52e-27,108;CL:0002031,1.07e-23,120;CL:0002087,1.06e-22,115;CL:0000738,2.39e-20,136;CL:0002032,1.93e-16,161;CL:0000837,1.93e-16,161;CL:0000037,1.49e-15,168;CL:0000988,1.62e-14,177;CL:0002541,1.02e-08,3;CL:0000134,1.52e-08,354;CL:0002320,2.87e-08,361;CL:0000219,2.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-45;42!CL:0000049;1.40e-07;108!UBERON:0003124;3.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.38e-23!80;UBERON:0001474!1.36e-20!86;UBERON:0002390!2.44e-19!102;UBERON:0003061!2.44e-19!102;UBERON:0002193!1.05e-16!112;UBERON:0004765!3.90e-16!101;UBERON:0001434!3.90e-16!101;UBERON:0002405!5.91e-15!115;UBERON:0003081!2.08e-08!216;UBERON:0002204!1.46e-07!167;UBERON:0000476!1.96e-07!3;UBERON:0000920!1.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.10e-08;3!UBERON:0000920;1.10e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.66e-40,76;UBERON:0001474,8.31e-37,82;UBERON:0004765,3.87e-33,90;UBERON:0002405,6.35e-32,93;UBERON:0002390,4.62e-30,98;UBERON:0003061,4.62e-30,98;UBERON:0001434,2.28e-29,100;UBERON:0002193,7.52e-27,108;UBERON:0002204,1.12e-15,167;UBERON:0003081,2.67e-13,203;UBERON:0000920,1.02e-08,3;UBERON:0000926,1.94e-08,315;UBERON:0004120,1.94e-08,315;UBERON:0006603,1.94e-08,315;UBERON:0003124,5.15e-08,7;UBERON:0002384,6.85e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,3.25400651667958,6.98985409637104,13.6270803193846,7.19230980805376,6.40401766322752,4.7296445977717,7.92915065694223,16.7826017731795,4.06279459783025,6.58848188399116,4.36649840092553,8.31476892446813,10.4068523406107,7.06043859567406,6.39337125799041,0.659702600373432,0.398927315243264,0.852449501065388,1.45104619314292,1.13477044938228,0,14.0699252543776,13.5585558789252,17.8094852658196,0,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,8.42415354501256,5.94524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88491053260521,0.325942115766024,3.82801391678303,0.183195186803725,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,5.41164309892173,0.829505531177977,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,2.32140586367385,0,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,1.20008329398946,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.193285325855,0.230467975111559,0,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,1.8328549483524,4.6530957849648,0,0,0,0,0,0.513314034281235,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p2@ATF3 | |||
}} |
Latest revision as of 00:04, 25 September 2015
Short description: | p2@ATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATF3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 45bp_to_ENST00000366987, uc001hjf.2_5end |
EntrezGene: | ATF3 |
HGNC: | 785 |
UniProt: | P18847 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.29e-61 | 48 |
phagocyte | 1.29e-61 | 48 |
classical monocyte | 9.42e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.42e-59 | 42 |
macrophage dendritic cell progenitor | 6.24e-51 | 61 |
monopoietic cell | 2.38e-48 | 59 |
monocyte | 2.38e-48 | 59 |
monoblast | 2.38e-48 | 59 |
promonocyte | 2.38e-48 | 59 |
granulocyte monocyte progenitor cell | 5.24e-46 | 67 |
myeloid lineage restricted progenitor cell | 8.39e-43 | 66 |
myeloid leukocyte | 6.80e-39 | 72 |
myeloid cell | 7.52e-27 | 108 |
common myeloid progenitor | 7.52e-27 | 108 |
hematopoietic lineage restricted progenitor cell | 1.07e-23 | 120 |
nongranular leukocyte | 1.06e-22 | 115 |
leukocyte | 2.39e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.93e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-16 | 161 |
hematopoietic stem cell | 1.49e-15 | 168 |
hematopoietic cell | 1.62e-14 | 177 |
chorionic membrane mesenchymal stem cell | 1.02e-08 | 3 |
mesenchymal cell | 1.52e-08 | 354 |
connective tissue cell | 2.87e-08 | 361 |
motile cell | 2.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.66e-40 | 76 |
bone element | 8.31e-37 | 82 |
skeletal element | 3.87e-33 | 90 |
immune system | 6.35e-32 | 93 |
hematopoietic system | 4.62e-30 | 98 |
blood island | 4.62e-30 | 98 |
skeletal system | 2.28e-29 | 100 |
hemolymphoid system | 7.52e-27 | 108 |
musculoskeletal system | 1.12e-15 | 167 |
lateral plate mesoderm | 2.67e-13 | 203 |
egg chorion | 1.02e-08 | 3 |
mesoderm | 1.94e-08 | 315 |
mesoderm-derived structure | 1.94e-08 | 315 |
presumptive mesoderm | 1.94e-08 | 315 |
chorion | 5.15e-08 | 7 |
connective tissue | 6.85e-08 | 371 |