FFCP PHASE1:Hg19::chr9:114937543..114937559,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:114937543..114937559,-
|short_description=p3@SUSD1
|description=CAGE_peak_3_at_SUSD1_5end
|association_with_transcript=0bp_to_ENST00000374263,ENST000003742...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64420 | |EntrezGene=64420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |HGNC=25413 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAQ1,Q6UWL2 | |UniProt=F8WAQ1,Q6UWL2 | ||
|association_with_transcript=0bp_to_ENST00000374263,ENST00000374264,NM_022486,uc004bfu.2,uc010mui.2,uc010muj.2_5end | |||
|cluster_id=chr9:114937543..114937559,- | |||
|description=CAGE_peak_3_at_SUSD1_5end | |||
|id=chr9:114937543..114937559,- | |||
|ontology_enrichment_celltype=CL:0000763!2.29e-14!112;CL:0000049!2.29e-14!112;CL:0000037!1.87e-11!172;CL:0000566!1.87e-11!172;CL:0000766!3.82e-11!76;CL:0000988!8.61e-11!182;CL:0002032!3.05e-10!165;CL:0000837!3.05e-10!165;CL:0000839!2.53e-09!70;CL:0000557!2.80e-08!71;CL:0000860!6.65e-08!45;CL:0002057!1.69e-07!42;CL:0002194!3.13e-07!63;CL:0000576!3.13e-07!63;CL:0000040!3.13e-07!63;CL:0000559!3.13e-07!63;CL:0000738!8.31e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.11e-15,108;CL:0000049,1.11e-15,108;CL:0000037,2.82e-13,168;CL:0002032,3.75e-12,161;CL:0000837,3.75e-12,161;CL:0000988,4.16e-12,177;CL:0000766,5.49e-11,72;CL:0000839,4.07e-09,66;CL:0000860,8.92e-09,42;CL:0002057,8.92e-09,42;CL:0000557,1.95e-08,67;CL:0000738,7.85e-08,136;CL:0000473,2.37e-07,48;CL:0000234,2.37e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.67e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-08!102;UBERON:0003061!1.19e-08!102;UBERON:0002193!3.06e-07!112;UBERON:0000160!6.96e-07!27 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.96e-09,98;UBERON:0003061,4.96e-09,98;UBERON:0002193,3.29e-07,108;UBERON:0002371,8.60e-07,76 | |||
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| ||
|short_description=p3@SUSD1 | |||
}} | }} |
Latest revision as of 05:29, 20 September 2015
Short description: | p3@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374263, ENST00000374264, NM_022486, uc004bfu.2, uc010mui.2, uc010muj.2_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | F8WAQ1Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.11e-15 | 108 |
common myeloid progenitor | 1.11e-15 | 108 |
hematopoietic stem cell | 2.82e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.75e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-12 | 161 |
hematopoietic cell | 4.16e-12 | 177 |
myeloid leukocyte | 5.49e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.07e-09 | 66 |
classical monocyte | 8.92e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.92e-09 | 42 |
granulocyte monocyte progenitor cell | 1.95e-08 | 67 |
leukocyte | 7.85e-08 | 136 |
defensive cell | 2.37e-07 | 48 |
phagocyte | 2.37e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.96e-09 | 98 |
blood island | 4.96e-09 | 98 |
hemolymphoid system | 3.29e-07 | 108 |
bone marrow | 8.60e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.67e-07 | 8 |