FFCP PHASE1:Hg19::chr20:39657101..39657106,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:39657101..39657106,- | |||
|description=CAGE_peak_at_chr20:39657101..39657106,- | |||
|id=chr20:39657101..39657106,- | |||
|ontology_enrichment_celltype=CL:0000860!7.38e-17!45;CL:0002057!4.73e-15!42;CL:0000548!6.43e-14!679;CL:0000004!6.43e-14!679;CL:0000255!6.43e-14!679;CL:0000012!1.99e-13!682;CL:0002087!1.44e-10!119;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0002031!1.94e-10!124;CL:0000988!3.70e-10!182;CL:0002194!4.98e-10!63;CL:0000576!4.98e-10!63;CL:0000040!4.98e-10!63;CL:0000559!4.98e-10!63;CL:0000839!8.67e-10!70;CL:0000037!1.54e-09!172;CL:0000566!1.54e-09!172;CL:0000063!1.98e-09!578;CL:0000557!1.99e-09!71;CL:0002009!2.92e-09!65;CL:0000003!1.03e-08!722;CL:0000738!1.62e-08!140;CL:0000763!4.02e-08!112;CL:0000049!4.02e-08!112;CL:0000766!8.20e-08!76;CL:0000144!2.79e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-31;33!CL:0002057;1.27e-31;33!CL:0000473;1.03e-21;39!CL:0000234;1.03e-21;39!CL:0000576;1.52e-14;48!CL:0002328;2.61e-09;3!CL:0002202;5.31e-08;9!CL:0002632;5.31e-08;9!CL:0000766;2.90e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-26,42;CL:0002057,1.66e-26,42;CL:0000473,1.84e-22,48;CL:0000234,1.84e-22,48;CL:0002194,8.04e-17,59;CL:0000576,8.04e-17,59;CL:0000040,8.04e-17,59;CL:0000559,8.04e-17,59;CL:0002009,4.26e-16,61;CL:0000839,1.77e-14,66;CL:0000557,3.48e-14,67;CL:0002087,7.55e-14,115;CL:0000766,7.75e-13,72;CL:0000037,3.44e-12,168;CL:0000988,4.14e-12,177;CL:0002032,4.77e-12,161;CL:0000837,4.77e-12,161;CL:0002031,6.84e-12,120;CL:0000738,1.20e-11,136;CL:0000763,1.45e-11,108;CL:0000049,1.45e-11,108;CL:0002328,1.98e-09,3;CL:0002202,4.46e-08,9;CL:0002632,4.46e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.15e-19;42 | |||
|ontology_enrichment_disease=DOID:162!1.58e-13!235;DOID:14566!6.23e-13!239;DOID:0050687!4.09e-08!143;DOID:2531!7.66e-08!51;DOID:0060083!7.66e-08!51;DOID:305!6.84e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.20e-11!80;UBERON:0001474!2.42e-09!86;UBERON:0002390!7.02e-08!102;UBERON:0003061!7.02e-08!102;UBERON:0002405!1.62e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.61e-09;3!UBERON:0002031;2.61e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-14,76;UBERON:0001474,3.47e-13,82;UBERON:0002390,1.58e-12,98;UBERON:0003061,1.58e-12,98;UBERON:0002405,3.36e-12,93;UBERON:0004765,1.66e-11,90;UBERON:0002193,8.59e-11,108;UBERON:0001434,8.52e-10,100;UBERON:0004815,1.98e-09,3;UBERON:0002031,1.98e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,1.22400414746552,0,0,0.410623275218653,0.125542639594803,0.458480434487708,0.738905305049512,0.314843125254717,0,0,0,1.83884244895785,2.409647350226,1.10926203050036,1.47187681102573,0.853015394924529,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0.755751887377619,1.21292030593908,0.232429036905685,1.6446715520873,2.16794459626573,2.01384674625505,1.7931249457037,4.25668013799453,0.689491361473237,1.93645405075148,6.77132432971709,0,0.818718450173537,1.34834090667051,0.612167784741805,0.962787081228281,2.55734850319616,1.64925650093358,1.79517291859469,3.40979800426155,0,1.70215567407342,5.60540024096017,1.50749199154046,2.08593167368081,4.56096573880745,1.21079900526674,2.57794345191295,4.1140110367315,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.590129310341499,0,1.23360899399706,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0.198762407366705,0,0,1.13061588384802,0,0,0.626984899610432,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.937285727335186,0,0.570471821544449,0,0.469737994575059,0.809364721840658,0.421352420106746,0,0.737005903870608,0.413303124703062,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0.286804595389004,1.09776335516636,0.265059536642971,0.348581828608555,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,3.5317047953172,0.737930631258681,0,0.548751427043128,2.24803506515239,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0,0,0.288732895522148,0,0,0.790204397959275,3.43394464837949,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0.381988425558278,0,0,0.102827492703324,0,0,0.336393253036082,0,0,0,0,0,0,1.04007436911366,0.771622122786426,1.41849132023278,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0,2.91421374383171,0,1.07813787429759,0.77005821767849,0,0,0,0,1.27587750330633,0,0,0,0,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,2.27407504055985,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,1.0877350463246,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.131124414959424,0,0,0.784349769176855,0,0,0,0.510281115829547,0,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,0,0.650060246036521,0,0.48335359146061,0.308097234229289,0.921022048356777,0.551346289938122,0,0,0.340906509664404,0.356128142586949,0.165284915360978,0.576570202095319,0.255225424989168,0.809262246844399,0,0.94443704049192,0,0.308033580176089,0,0.869932992075073,0,0.429374660225974,0,0,0,0.511795582622668,0.42793898803392,1.27281299170375,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,2.11300293513511,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.75894634753143,0,0.577332676353072,1.34060455107157,5.44454924306613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30062222588003,0.577076851905779,0.355709216742071,0.478278818186467,0,0.191505370132367,1.48171507906718,0,0,1.14117339516596,0.156679895773023,0,0.169291777801603,0.481764225311099,0.403599414382095,0.425846237690326,0.687010689511529,0,0,0.166849141711909,0,0,0,0,0.66614393599564,1.4098700508785,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0.779160935160341,2.63686198762815,0.211125408127993,0,0.276283915531148,0,0,1.10776324914963,0,0.449341755736634,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.520855522170466,0,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.697118721393016,0,0.455768223388005,0.46112780877612,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0.392125068635479,0.503464760927528,0,0.158936578980379,0,0.163232808159148,0.424059214301822,0,0,0,0,4.15129580152871,0.617819694732514,0.417687798021821,0,0,0,0.729819156862664,0.978323094660449,0.728341138602278,0,0,0,0,1.50323419414493,0.207376382794494,0.664653872707185,0,1.2557316736289,1.19472429772959,0.284609546029793,0,0,0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| |||
|short_description=p@chr20:39657101..39657106,- | |||
}} |
Latest revision as of 14:01, 28 July 2015
Short description: | p@chr20:39657101..39657106, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:39657101..39657106, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-26 | 42 |
defensive cell | 1.84e-22 | 48 |
phagocyte | 1.84e-22 | 48 |
monopoietic cell | 8.04e-17 | 59 |
monocyte | 8.04e-17 | 59 |
monoblast | 8.04e-17 | 59 |
promonocyte | 8.04e-17 | 59 |
macrophage dendritic cell progenitor | 4.26e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-14 | 66 |
granulocyte monocyte progenitor cell | 3.48e-14 | 67 |
nongranular leukocyte | 7.55e-14 | 115 |
myeloid leukocyte | 7.75e-13 | 72 |
hematopoietic stem cell | 3.44e-12 | 168 |
hematopoietic cell | 4.14e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.77e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.77e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 6.84e-12 | 120 |
leukocyte | 1.20e-11 | 136 |
myeloid cell | 1.45e-11 | 108 |
common myeloid progenitor | 1.45e-11 | 108 |
bronchial epithelial cell | 1.98e-09 | 3 |
epithelial cell of tracheobronchial tree | 4.46e-08 | 9 |
epithelial cell of lower respiratory tract | 4.46e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-14 | 76 |
bone element | 3.47e-13 | 82 |
hematopoietic system | 1.58e-12 | 98 |
blood island | 1.58e-12 | 98 |
immune system | 3.36e-12 | 93 |
skeletal element | 1.66e-11 | 90 |
hemolymphoid system | 8.59e-11 | 108 |
skeletal system | 8.52e-10 | 100 |
lower respiratory tract epithelium | 1.98e-09 | 3 |
epithelium of bronchus | 1.98e-09 | 3 |