FFCP PHASE1:Hg19::chr20:44523712..44523736,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:44523712..44523736,+ | |||
|coexpression_cluster_id=C1869 | |||
|description=CAGE_peak_at_chr20:44523712..44523736,+ | |||
|id=chr20:44523712..44523736,+ | |||
|ontology_enrichment_celltype=CL:0000048!6.81e-13!430;CL:0000723!9.82e-12!436;CL:0000034!4.32e-11!444;CL:0002194!1.04e-10!63;CL:0000576!1.04e-10!63;CL:0000040!1.04e-10!63;CL:0000559!1.04e-10!63;CL:0002320!1.89e-10!365;CL:0002371!2.61e-10!591;CL:0002009!1.37e-09!65;CL:0000134!2.97e-09!358;CL:0000144!6.86e-09!625;CL:0000548!3.60e-08!679;CL:0000004!3.60e-08!679;CL:0000255!3.60e-08!679;CL:0000839!6.86e-08!70;CL:0000860!7.35e-08!45;CL:0002057!8.17e-08!42;CL:0000012!1.02e-07!682;CL:0000557!1.87e-07!71;CL:0000219!2.01e-07!390;CL:0000766!2.01e-07!76;CL:0000055!2.78e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.42e-12;39!CL:0000234;2.42e-12;39!CL:0000860;5.15e-12;33!CL:0002057;5.15e-12;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.25e-15,427;CL:0000723,7.25e-15,433;CL:0002320,3.45e-14,361;CL:0000034,6.88e-14,441;CL:0000134,1.50e-13,354;CL:0000473,4.25e-13,48;CL:0000234,4.25e-13,48;CL:0000219,2.35e-11,386;CL:0002194,2.76e-11,59;CL:0000576,2.76e-11,59;CL:0000040,2.76e-11,59;CL:0000559,2.76e-11,59;CL:0000860,7.55e-11,42;CL:0002057,7.55e-11,42;CL:0002009,1.35e-10,61;CL:0000839,4.51e-09,66;CL:0000557,8.46e-09,67;CL:0000766,2.16e-08,72;CL:0000057,2.83e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.62e-11!448;UBERON:0004120!6.62e-11!448;UBERON:0006603!6.62e-11!448;UBERON:0003081!4.94e-10!216;UBERON:0002384!6.28e-10!375;UBERON:0002405!1.54e-08!115;UBERON:0002204!1.65e-08!167;UBERON:0002371!6.32e-07!80;UBERON:0002193!9.90e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.65e-07;9!UBERON:0000042;2.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.48e-14,371;UBERON:0000926,6.66e-12,315;UBERON:0004120,6.66e-12,315;UBERON:0006603,6.66e-12,315;UBERON:0003081,7.84e-10,203;UBERON:0002204,9.28e-09,167;UBERON:0002371,1.37e-08,76;UBERON:0002405,2.07e-07,93;UBERON:0001434,2.36e-07,100;UBERON:0001474,2.90e-07,82;UBERON:0004765,7.99e-07,90 | |||
|phase1_expression=1.45342703416445,5.1384125733836,1.55049844505568,1.0007329835313,2.68176656656373,3.48935409640147,5.06599756336621,0,0.783556884599516,0,0.697801167972428,0.218441372130172,0.527533956456907,0.618831764800233,0.994192127183747,4.03395087871065,1.80808358407193,1.46062018077475,2.43966399395253,0.738726348460727,1.22400414746552,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,0,0,0,1.10799081706375,1.20326668482085,0.434021741431704,1.34349284543955,2.59114932815184,0.515151135268373,1.89017710413434,1.13362783106643,0.242584061187816,2.55671940596253,0.411167888021826,0,1.7261543539329,2.30544635876191,0.236482229888585,1.72372840368309,1.29096936716765,2.70852973188684,2.44715041405386,0.545812300115692,1.12361742222542,0.918251677112708,1.28371610830437,4.47535988059329,2.63881040149373,1.39624560335142,1.27867425159808,2.32167390902867,1.13477044938228,1.24564449799115,2.76373531782418,1.0429658368404,1.52032191293582,1.81619850790011,1.10483290796269,1.58231193720442,0.422510572623884,0.637812899895131,0,1.01095768031846,2.10247649978109,0.48217676009124,0,0.39783335439818,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.334372990781356,0.32592226663359,0.473447805734733,0,0.891283655081389,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.130059347559878,0,0.276350017785848,0,0,0.535081656179426,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,2.68280343881454,0.383587685530591,0.722878304769133,2.00535164254356,2.60723734129483,0,1.94653948121054,0.378139268656271,0.221729397462564,0,0.589405839739707,0.728590576585084,0.370784442784429,0.649094787309367,0.522389211897802,2.52620124985844,0.238490624305342,0,0.74291500265913,0,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0,1.29208379584664,0.71153252537342,1.33888245105868,0.805658634218294,0.760272105718513,0.976248230192678,0.367663080345869,1.62028389576352,0.892997282840798,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0.496971951695318,1.51956613997496,1.32409180813219,8.3182620017156,3.19201543978521,0.560677600142307,0,1.2333377420858,0,0.942974704487816,0.817309515567294,0.454072282934794,0,0.234321431833797,0.936480230490962,0.570471821544449,1.19558944441441,0.587172493218824,0,0.561803226808994,0,0.491337269247072,0.309977343527296,1.18800285728205,4.69807165629258,0,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,0,1.22595118319608,1.95309476578576,0,0.89694817844431,1.2813443329114,1.05965950579781,0.600182192168805,1.03052529238439,1.28820270022815,0.744467425326359,1.5189869901714,1.07180705677318,0.252433774244115,1.01254888506529,1.61646056818812,1.77504796258307,0.906768884048762,1.01736355386293,0.193260853163297,0,0,0.609868530647977,0.397589304964456,0,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.709840800239063,0.674338760312407,0.241011029883482,0.772057809126758,0.871517776369625,0.949082476444386,0.404493924480493,0.588664395376038,0.38474715694639,2.95262181849859,1.40241773803446,0,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0,0.737930631258681,0.171567810298526,0,0,0.100528972411631,0.370353780634118,0,2.07986957055916,0,0,0,0.433099343283221,2.31492756288305,0.570762456703795,0,0,1.96973604869918,0.936017060556951,0.891786973732369,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.190493682876507,0.763976851116555,0,1.71072446022705,1.85089486865982,0.300343057843917,2.28661146104463,0,0.87192013766656,0.07333828582095,0.775630294546667,0,0,1.59562869950922,3.12022310734098,0.514414748524284,0,0.266422179016099,0.57191197463259,0.542621605391443,1.64648067356154,0.325736184293735,0.355391948742546,2.37585561880029,0.602878754119172,0,1.3996218765488,3.64871341923571,7.5338563714819,10.5416969741516,1.67737398844108,1.14861935834114,0,1.01346914667305,1.2328579353023,0.179060963239896,0.448340575974109,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0.749007023947182,5.9832291840805,0,1.10422342547226,2.00068208423871,0.542530047399471,0.623912584592421,2.14114786556594,1.41932173530541,0.702848489956279,0,15.9185252839189,5.17365356462525,0,0.737476674166813,1.30325421702124,0.979005787313703,2.74514739048685,0.206768026122887,0.862856803274467,0.426910231213777,0.303127571446259,3.32870879020994,1.5119514666484,3.2254015016441,0.153461973288062,4.77122160536225,2.30650468660262,2.04682899626681,2.0911009748669,1.48418066444991,1.07946785661859,0.887808626565635,0.164254312027618,3.11552657510173,0.581051892299796,1.45031339509947,1.20303882181971,0.736647911487171,1.37777337797528,2.1850940160806,5.11385218341754,0.451199612907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| |||
|short_description=p@chr20:44523712..44523736,+ | |||
}} |
Latest revision as of 14:33, 28 July 2015
Short description: | p@chr20:44523712..44523736, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44523712..44523736, + |
Coexpression cluster: | C1869_Monocytederived_leiomyoma_Osteoblast_Fibroblast_Prostate_mixed_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.25e-15 | 427 |
somatic stem cell | 7.25e-15 | 433 |
connective tissue cell | 3.45e-14 | 361 |
stem cell | 6.88e-14 | 441 |
mesenchymal cell | 1.50e-13 | 354 |
defensive cell | 4.25e-13 | 48 |
phagocyte | 4.25e-13 | 48 |
motile cell | 2.35e-11 | 386 |
monopoietic cell | 2.76e-11 | 59 |
monocyte | 2.76e-11 | 59 |
monoblast | 2.76e-11 | 59 |
promonocyte | 2.76e-11 | 59 |
classical monocyte | 7.55e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.55e-11 | 42 |
macrophage dendritic cell progenitor | 1.35e-10 | 61 |
myeloid lineage restricted progenitor cell | 4.51e-09 | 66 |
granulocyte monocyte progenitor cell | 8.46e-09 | 67 |
myeloid leukocyte | 2.16e-08 | 72 |
fibroblast | 2.83e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.48e-14 | 371 |
mesoderm | 6.66e-12 | 315 |
mesoderm-derived structure | 6.66e-12 | 315 |
presumptive mesoderm | 6.66e-12 | 315 |
lateral plate mesoderm | 7.84e-10 | 203 |
musculoskeletal system | 9.28e-09 | 167 |
bone marrow | 1.37e-08 | 76 |
immune system | 2.07e-07 | 93 |
skeletal system | 2.36e-07 | 100 |
bone element | 2.90e-07 | 82 |
skeletal element | 7.99e-07 | 90 |