FFCP PHASE1:Hg19::chr22:31063977..31064004,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=62bp_to_BC031973_5end | |||
|cluster_id=chr22:31063977..31064004,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_BC031973_5end | |||
|id=chr22:31063977..31064004,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.07e-17;2!CL:1000398;1.07e-17;2!CL:0000623;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,9.07e-18,2;CL:1000398,9.07e-18,2;CL:0000623,3.24e-12,3;CL:0000825,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.94e-08!143;DOID:305!6.10e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.07e-17;2!UBERON:0003497;1.07e-17;2!UBERON:0003909;1.07e-17;2!UBERON:0003835;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0001280;2.89e-12;3!UBERON:0004647;2.89e-12;3!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.07e-18,2;UBERON:0003497,9.07e-18,2;UBERON:0003909,9.07e-18,2;UBERON:0003835,9.07e-18,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001280,2.59e-12,3;UBERON:0004647,2.59e-12,3;UBERON:0005171,2.59e-12,3;UBERON:0001052,1.57e-09,4;UBERON:0004907,7.01e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,20.8911625418852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,1.02674429023799,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0.0874599999961957,0,0,0,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0,0.179515288819544,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0.782658475728359,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0.391102765469606,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0.767660789277781,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0.94808167039636,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.378499274505237,0.218531143927391,0.380095503034311,0,0,0.18378979906969,0,36.070660351882,69.9386379707626,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.358611026963382,0,0,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p2@BC031973 | |||
}} |
Latest revision as of 20:13, 28 July 2015
Short description: | p2@BC031973 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC031973_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 62bp_to_BC031973_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 9.07e-18 | 2 |
endothelial cell of hepatic sinusoid | 9.07e-18 | 2 |
natural killer cell | 3.24e-12 | 3 |
pro-NK cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.07e-18 | 2 |
abdomen blood vessel | 9.07e-18 | 2 |
sinusoid | 9.07e-18 | 2 |
abdominal segment blood vessel | 9.07e-18 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
liver parenchyma | 2.59e-12 | 3 |
liver lobule | 2.59e-12 | 3 |
hepatic duct | 2.59e-12 | 3 |
rectum | 1.57e-09 | 4 |
lower digestive tract | 7.01e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |