FFCP PHASE1:Hg19::chr22:38453473..38453494,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9394 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466374_5end | |||
|cluster_id=chr22:38453473..38453494,+ | |||
|description=CAGE_peak_3_at_PICK1_5end | |||
|id=chr22:38453473..38453494,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.55e-22!254;CL:0002076!2.04e-12!43;CL:0000223!1.14e-10!59;CL:0002368!1.99e-07!13;CL:0002159!3.25e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.34e-11;42!CL:0002368;8.79e-11;13!CL:0002159;2.54e-09;14!CL:0002202;5.18e-09;9!CL:0002632;5.18e-09;9!CL:0002322;1.98e-08;5!CL:0000312;3.09e-07;5!CL:0000039;7.68e-07;7!CL:0000586;7.68e-07;7!CL:0000082;8.99e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-28,253;CL:0002076,1.32e-14,42;CL:0000223,6.22e-13,58;CL:0002368,1.22e-10,13;CL:0002159,2.43e-09,14;CL:0002202,5.53e-09,9;CL:0002632,5.53e-09,9;CL:0002322,1.56e-08,5;CL:0000312,2.45e-07,5;CL:0000039,5.33e-07,7;CL:0000586,5.33e-07,7;CL:0000082,9.49e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;4.56e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.09e-26!106;DOID:0050687!1.77e-18!143;DOID:1749!3.19e-09!14;DOID:299!5.86e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.60e-15;14!DOID:305;1.58e-09;106!DOID:299;2.45e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.03e-25,106;DOID:0050687,2.54e-19,143;DOID:1749,6.19e-15,14;DOID:162,2.90e-08,235;DOID:14566,9.38e-08,239;DOID:299,1.49e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.38e-15!169;UBERON:0000925!1.38e-15!169;UBERON:0006595!1.38e-15!169;UBERON:0001004!6.01e-12!72;UBERON:0001007!8.52e-12!155;UBERON:0001555!8.52e-12!155;UBERON:0007026!8.52e-12!155;UBERON:0004921!1.08e-11!129;UBERON:0004185!1.08e-11!129;UBERON:0000077!7.83e-11!130;UBERON:0000065!1.36e-10!53;UBERON:0000064!1.42e-09!219;UBERON:0000464!4.46e-09!104;UBERON:0008947!5.22e-09!38;UBERON:0003258!5.22e-09!38;UBERON:0001041!1.69e-08!98;UBERON:0000072!2.10e-08!46;UBERON:0000466!2.76e-08!126;UBERON:0007023!3.04e-08!115;UBERON:0005153!4.15e-08!37;UBERON:0005911!7.04e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;6.00e-07;36!UBERON:0003135;6.22e-07;11!UBERON:0004802;8.99e-07;19!UBERON:0000115;8.99e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.05e-10,160;UBERON:0000925,9.05e-10,160;UBERON:0006595,9.05e-10,160;UBERON:0005156,1.18e-07,59;UBERON:0000990,1.18e-07,59;UBERON:0005911,1.28e-07,82;UBERON:0005153,1.79e-07,37;UBERON:0006554,2.68e-07,47;UBERON:0003133,3.38e-07,48;UBERON:0005177,3.82e-07,101;UBERON:0001008,4.96e-07,48;UBERON:0003135,5.26e-07,11;UBERON:0001007,6.62e-07,145;UBERON:0001555,6.62e-07,145;UBERON:0007026,6.62e-07,145;UBERON:0001004,9.36e-07,74;UBERON:0004802,9.49e-07,19;UBERON:0000115,9.49e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,26.5164443829522,2.62129646556207,3.9565046734268,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0.125542639594803,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,4.59710612239464,3.91567694411725,1.10926203050036,1.70427841276664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,0,1.17447437874188,1.14681968437569,0,0,0,0.393419540227666,0,0.411202997999018,0.334372990781356,1.62961133316795,1.4203434172042,1.94826728407911,0,0.589211814949674,0.221533894583621,1.35401931882508,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0.741432815810302,0.802622484269139,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.602300476311091,0,0,0.236777252044017,1.64225599384209,0.604820229674197,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.81605012320082,2.18577172975525,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0.57978255948989,0.818238361772504,2.86804595389004,7.80631719229411,8.61443494089654,5.92589108634544,3.83545903556871,7.82194637714448,4.74470566798579,0,0,0,0,0,0.828147600278907,0.168584690078102,0.482022059766964,0.330881918197182,0.653638332277218,1.42362371466658,0.134831308160164,0.392442930250692,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0,3.56666471775029,0,1.75600456653801,2.24803506515239,2.51322431029077,0.462942225792648,0,0,1.44331342025273,0,0,0,0,0,1.58040879591855,6.00940313466411,0,0,0,0.93733833986777,1.34385702559088,2.41017665312057,0.895585227028483,2.61570544662566,2.68367875415648,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.513372145118994,0,0,1.54657762555539,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0.215714200818617,0.426910231213777,2.12189300012382,1.66435439510497,3.62868351995616,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,3.98836183652353,2.00506470303285,0.368323955743585,0.114814448164607,0,0,0.902399225814824,0.847168708148562,2.35304930753057,1.46139224653261,0.527758144464379,0,0,0,0,0,0.501689773854853,1.78413391131527,1.66215201785745,1.11937377361089,0.219259876645935,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0,1.32227932288782,2.11409074101617,3.44554323735377,0.910420027699949,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,1.44333169088268,2.68120910214315,5.44454924306613,1.03558180854457,3.01353760869861,0,2.21715076768338,1.37834040124176,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0.213648142254946,0,2.94048259177238,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0.111443384277478,0,1.19372242368845,2.37571744666111,0.921482106297696,0.994147647766298,0.562677665642051,0,0,3.58913193817589,0.19924798825107,0.276283915531148,7.55798243562828,0.102268682502155,0.123084805461069,0,2.96565558786179,3.58042349351218,0,0.295930216910801,0,0,0,0.278304294485554,0,1.82299432759663,5.68489999975272,0,2.50345586228099,5.33932665614809,3.78220290828698,2.06846023944879,0,0,0,0,0,0.552896299656123,0.886642856860642,0.658156191461918,0.10893846351899,1.39423744278603,0.153900517007594,0,1.84451123510448,3.2312751987518,3.47671590150426,0.638002319463839,1.4655614944298,1.06606955203727,0,0,0,0.451191321234361,0,0,0.189753732724185,0,0.632994193584081,1.79556088975062,5.79547592879157,0,0.995261931078505,0.530745387020035,0.611030144933625,0.296521128680622,0,0.208843899010911,0.337005664903385,0,0.468528891450678,0.182454789215666,1.36965233252463,0,1.18375320854817,3.62972148145992,0.61214552326098,0.189559738885464,7.06520071248115,0.829505531177977,0,0,0.313932918407225,0,4.55375273647668,0,4.68611293504853,3.5277263069176,1.39294730528644,1.92199335066233,0,0.387025325156341,0.219267951258557,0.164230914106418,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,4.30213042016567,0.240476460754601,0.640358984218058,0.599428828746391,0.864542502924636,0,0.343189995723929,0.576219191952599,0.124252535565433,2.35694034616795,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0.998395002494955,0,0.223171457441873,0.0671834724867263,0,1.16495949527454,1.3393140992228,0.412079291905832,1.01105315781277,0,0.508039992394707,0,0.408610218334727,6.43012593860077,8.1148267592368,6.64704540846696,0.2249738915515,0,0.182248669974074,2.0126081255956,1.10327990218877,1.20645552710496,0,0,1.91915197319445,0.7146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| |||
|short_description=p3@PICK1 | |||
}} |
Latest revision as of 07:13, 20 September 2015
Short description: | p3@PICK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PICK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466374_5end |
EntrezGene: | PICK1 |
HGNC: | 9394 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-28 | 253 |
endo-epithelial cell | 1.32e-14 | 42 |
endodermal cell | 6.22e-13 | 58 |
respiratory epithelial cell | 1.22e-10 | 13 |
general ecto-epithelial cell | 2.43e-09 | 14 |
epithelial cell of tracheobronchial tree | 5.53e-09 | 9 |
epithelial cell of lower respiratory tract | 5.53e-09 | 9 |
embryonic stem cell | 1.56e-08 | 5 |
keratinocyte | 2.45e-07 | 5 |
germ line cell | 5.33e-07 | 7 |
germ cell | 5.33e-07 | 7 |
epithelial cell of lung | 9.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.05e-10 | 160 |
endoderm | 9.05e-10 | 160 |
presumptive endoderm | 9.05e-10 | 160 |
reproductive structure | 1.18e-07 | 59 |
reproductive system | 1.18e-07 | 59 |
endo-epithelium | 1.28e-07 | 82 |
epithelial bud | 1.79e-07 | 37 |
urinary system structure | 2.68e-07 | 47 |
reproductive organ | 3.38e-07 | 48 |
trunk region element | 3.82e-07 | 101 |
renal system | 4.96e-07 | 48 |
male reproductive organ | 5.26e-07 | 11 |
digestive system | 6.62e-07 | 145 |
digestive tract | 6.62e-07 | 145 |
primitive gut | 6.62e-07 | 145 |
respiratory system | 9.36e-07 | 74 |
respiratory tract epithelium | 9.49e-07 | 19 |
lung epithelium | 9.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.03e-25 | 106 |
cell type cancer | 2.54e-19 | 143 |
squamous cell carcinoma | 6.19e-15 | 14 |
cancer | 2.90e-08 | 235 |
disease of cellular proliferation | 9.38e-08 | 239 |
adenocarcinoma | 1.49e-07 | 25 |