FFCP PHASE1:Hg19::chr2:157198760..157198762,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |||
|TSSclassifier=strong | |||
|UniProt=P43354 | |||
|association_with_transcript=97bp_to_ENST00000409572_5end | |||
|cluster_id=chr2:157198760..157198762,- | |||
|description=CAGE_peak_5_at_NR4A2_5end | |||
|id=chr2:157198760..157198762,- | |||
|ontology_enrichment_celltype=CL:0002057!3.26e-19!42;CL:0000860!7.27e-19!45;CL:0000738!1.32e-17!140;CL:0002087!3.28e-17!119;CL:0002031!4.98e-17!124;CL:0000766!5.79e-14!76;CL:0000557!1.97e-12!71;CL:0000839!3.20e-12!70;CL:0000037!5.09e-12!172;CL:0000566!5.09e-12!172;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0002009!2.20e-11!65;CL:0002194!2.57e-11!63;CL:0000576!2.57e-11!63;CL:0000040!2.57e-11!63;CL:0000559!2.57e-11!63;CL:0000988!2.59e-10!182;CL:0000763!7.67e-07!112;CL:0000049!7.67e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-28;33!CL:0002057;1.73e-28;33!CL:0000473;3.15e-21;39!CL:0000234;3.15e-21;39!CL:0000576;2.25e-17;48!CL:0000766;2.09e-15;69!CL:0002087;2.49e-09;104!CL:0000763;2.12e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.41e-32,42;CL:0002057,8.41e-32,42;CL:0000473,1.46e-28,48;CL:0000234,1.46e-28,48;CL:0000766,1.26e-27,72;CL:0000738,2.02e-26,136;CL:0000839,3.99e-23,66;CL:0002087,1.08e-22,115;CL:0000557,1.31e-22,67;CL:0002031,3.01e-22,120;CL:0002194,1.12e-20,59;CL:0000576,1.12e-20,59;CL:0000040,1.12e-20,59;CL:0000559,1.12e-20,59;CL:0002009,1.14e-19,61;CL:0000037,5.94e-19,168;CL:0002032,1.02e-17,161;CL:0000837,1.02e-17,161;CL:0000988,4.25e-17,177;CL:0000763,3.11e-15,108;CL:0000049,3.11e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-11!80;UBERON:0001474!1.74e-10!86;UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0004765!4.45e-09!101;UBERON:0001434!4.45e-09!101;UBERON:0002193!2.25e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.48e-21,76;UBERON:0002390,4.22e-20,98;UBERON:0003061,4.22e-20,98;UBERON:0001474,1.36e-18,82;UBERON:0002193,4.98e-18,108;UBERON:0004765,7.12e-17,90;UBERON:0002405,4.67e-16,93;UBERON:0001434,7.11e-15,100;UBERON:0003081,2.46e-09,203;UBERON:0002204,3.40e-08,167;UBERON:0002384,6.64e-07,371 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.618831764800233,0.994192127183747,0,1.20538905604795,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0.572471974262113,0.547497700291537,0.627713197974014,0.229240217243854,0.246301768349837,0.314843125254717,2.75354993794233,1.15148819429164,1.54816123316076,0,0,0.369754010166788,0,0,0.293600439334847,2.21598163412751,3.00816671205213,6.51032612147556,0.223915474239924,0,0,1.89017710413434,1.51150377475524,0.727752183563449,3.95129362739664,5.75635043230556,4.02618282163635,4.02769349251011,2.30544635876191,0.47296445977717,8.27389633767885,3.87290810150296,2.70852973188684,3.20011977222428,2.18324920046277,0.674170453335254,13.1616073719488,2.24650318953266,5.75403413219137,3.29851300186716,1.39624560335142,0.852449501065388,5.22376629531451,1.70215567407342,0,11.0549412712967,6.25779502104242,2.38907729175628,7.87019353423379,1.10483290796269,2.53169909952708,1.47878700418359,0.425208599930087,0.419317291016752,2.02191536063691,1.05123824989054,0.16072558669708,0.855038231223746,0.59675003159727,0.730656615058536,1.75996244461323,0.546138611262131,3.55803701545422,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,3.41527781465669,2.34894875748376,3.44045905312706,1.32171328579026,1.12101712596307,0.263384084775077,0.393419540227666,2.35806457649499,2.05601498999509,0.334372990781356,0.977766799900771,0.473447805734733,0,0.557052284425868,2.06224135232386,1.32920336750173,0.541607727530031,1.15282187753108,1.8208308658383,1.80881695064044,1.38175008892924,0.579606171470105,1.18629250529648,1.07016331235885,1.04535523804977,0.339928028092699,0.766440987203842,0.68725489096526,0.759059076058509,0.637130828648193,0.651083453856419,0,0,0.511946444617674,3.74792179657038,0.236777252044017,1.64225599384209,0.604820229674197,2.13952156626806,2.31719046212478,0,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0,0.283604451492204,0.443458794925128,0.614843499851882,0.261958150995425,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,1.20848795132744,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0.225222960966644,0,0,0,1.31780417436063,0,0,1.98788780678127,0.25326102332916,0.529636723252875,1.72101972449288,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,1.04614076386261,0.469737994575059,0.161872944368132,0.842704840213491,0,0.368502951935304,0.206651562351531,1.18800285728205,0.741800787835671,0,1.43723628363248,0.336672227908132,0.125118519871964,0,0.438977620880838,0.30648779579902,1.05166641234618,0.340296549480063,0.717558542755448,0.213557388818567,0.211931901159562,2.10063767259082,0.103052529238439,1.54584324027377,0,0.843881661206331,0.292311015483596,0.504867548488229,0,0,0.710019185033229,0.302256294682921,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,1.39310378409594,0,0.828147600278907,0,0,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,0,0,0.0895585227028483,0.290633938513962,0,1.97065295158377,0.264145302039678,2.28060927094849,1.00883967391873,3.7872730027914,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,2.43247561282381,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0.537182889719687,0.112085143993527,1.18218456121156,4.74380664690938,5.64709359630893,0,0,0,0.502548796003046,0.637938751653163,0,2.99161459204025,0.414415513436035,0.12269149171914,0,1.08506009479894,0.831883446123229,0.892144943985809,0.473107245101804,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0.686286847621712,1.86091223510599,3.45142721309787,1.17400313583789,0.303127571446259,0,0,0.992431231275107,0.767309866440312,0.841980283299221,0.128139149255701,0,0.482561763430822,1.48418066444991,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.348631135379878,0.120859449591622,0.40101294060657,0.828728900423067,0,0.364182336013434,0.655622074797121,0.451199612907412,0,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0.447749509444357,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0.48335359146061,0.462145851343933,0.15350367472613,1.10269257987624,0.214840489736547,0.435050081742686,0.340906509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| |||
|short_description=p5@NR4A2 | |||
}} |
Latest revision as of 16:11, 17 September 2015
Short description: | p5@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR4A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000409572_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | P43354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.41e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-32 | 42 |
defensive cell | 1.46e-28 | 48 |
phagocyte | 1.46e-28 | 48 |
myeloid leukocyte | 1.26e-27 | 72 |
leukocyte | 2.02e-26 | 136 |
myeloid lineage restricted progenitor cell | 3.99e-23 | 66 |
nongranular leukocyte | 1.08e-22 | 115 |
granulocyte monocyte progenitor cell | 1.31e-22 | 67 |
hematopoietic lineage restricted progenitor cell | 3.01e-22 | 120 |
monopoietic cell | 1.12e-20 | 59 |
monocyte | 1.12e-20 | 59 |
monoblast | 1.12e-20 | 59 |
promonocyte | 1.12e-20 | 59 |
macrophage dendritic cell progenitor | 1.14e-19 | 61 |
hematopoietic stem cell | 5.94e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-17 | 161 |
hematopoietic cell | 4.25e-17 | 177 |
myeloid cell | 3.11e-15 | 108 |
common myeloid progenitor | 3.11e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.48e-21 | 76 |
hematopoietic system | 4.22e-20 | 98 |
blood island | 4.22e-20 | 98 |
bone element | 1.36e-18 | 82 |
hemolymphoid system | 4.98e-18 | 108 |
skeletal element | 7.12e-17 | 90 |
immune system | 4.67e-16 | 93 |
skeletal system | 7.11e-15 | 100 |
lateral plate mesoderm | 2.46e-09 | 203 |
musculoskeletal system | 3.40e-08 | 167 |
connective tissue | 6.64e-07 | 371 |