FFCP PHASE1:Mm9::chr10:76880952..76880973,-: Difference between revisions
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{{FFCP|EntrezGene=110532|HGNC=|UniProt=D6RGS1,D6RDS5|association_with_transcript=0bp_to_ENSMUST00000105404,ENSMUST00000126073,ENSMUST00000149738,ENSMUST00000156583_5end|description=CAGE_peak_2_at_Adarb1_5end|id=chr10:76880952..76880973,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.75e-17!114;UBERON:0004111!2.15e-16!122;UBERON:0002048!2.02e-09!14;UBERON:0000117!2.02e-09!14;UBERON:0000171!2.02e-09!14;UBERON:0000170!2.02e-09!14;UBERON:0005597!2.02e-09!14;UBERON:0000118!2.02e-09!14;UBERON:0004535!2.62e-08!23;UBERON:0001009!2.62e-08!23;UBERON:0000477!4.44e-08!154;UBERON:0007100!4.74e-08!18;UBERON:0000948!4.74e-08!18;UBERON:0005498!4.74e-08!18;UBERON:0004140!4.74e-08!18;UBERON:0009881!4.74e-08!18;UBERON:0004141!4.74e-08!18;UBERON:0003084!4.74e-08!18;UBERON:0007005!4.74e-08!18;UBERON:0004139!4.74e-08!18;UBERON:0004291!4.74e-08!18;UBERON:0005153!9.47e-08!17;UBERON:0000033!1.31e-07!63;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002346!5.40e-07!71;UBERON:0003075!5.40e-07!71;UBERON:0007284!5.40e-07!71;UBERON:0002616!7.89e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.50e-16,114;UBERON:0004111,3.43e-15,122;UBERON:0010314,2.48e-12,92;UBERON:0002048,6.62e-10,14;UBERON:0000117,6.62e-10,14;UBERON:0000171,6.62e-10,14;UBERON:0000170,6.62e-10,14;UBERON:0005597,6.62e-10,14;UBERON:0000118,6.62e-10,14;UBERON:0004535,1.01e-08,23;UBERON:0001009,1.01e-08,23;UBERON:0007100,1.89e-08,18;UBERON:0000948,1.89e-08,18;UBERON:0005498,1.89e-08,18;UBERON:0004140,1.89e-08,18;UBERON:0009881,1.89e-08,18;UBERON:0004141,1.89e-08,18;UBERON:0003084,1.89e-08,18;UBERON:0007005,1.89e-08,18;UBERON:0004139,1.89e-08,18;UBERON:0004291,1.89e-08,18;UBERON:0005153,8.10e-08,17;UBERON:0000073,3.66e-07,54|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,1.267098499365,1.63845168425395,8.56089841127525,4.54701306273417,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.51076181570693,1.72340783073175,1.65192076945513,1.56478268869608,0,1.97717564461025,0.388859798148567,0.279972843250725,0,0,0,0.672187598284928,3.8588915405392,4.87106847895886,10.8291139378263,1.61853168687678,2.11596391708813,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0,0.384218305321555,0.725827286159344,1.35005938331691,0.420649922702764,3.71346279724945,4.41737081903227,1.46988959057945,0.862609239164127,2.75765635983006,20.9220173898839,51.9687466006714,31.7965523840424,1.97829431595291,1.28082701043374,1.56274011167028,6.14202597803038,3.37657566019008,5.65353516774197,2.65165726926301,2.70506193518296,1.3047961207771,1.74170244666323,1.96486056277642,6.95674772884027,2.58127163094416,10.879541339324,1.07940638327563,0.649776417447669,0.448026887097336,1.68533304158102,5.11290967734173,3.89679006904303,3.18005617059306,2.25349471642689,0,5.09610479413291,0,0,0,0,1.7127581957859,0.517875767294343,13.3597925158342,2.25530924795977,0.913396434936424,1.84492397804847,3.3158980921577,2.93971767839262,1.75933227861546,4.94389935468748,7.66376591675532,3.5384422077995,2.91180329905337,4.63767188766826,4.84875253135222,0,10.2473278954042,11.3101221679266,0.255457055208591,0.958520996047362,0,0.254140454146129,8.83764772488454,7.32000964509802,2.01046963380583,3.82413504423008,4.60287823194595,31.7915708176127,21.7403292510795,0.305518091550949,4.47865094196335,0,3.15662783829711,1.04096354370163,1.60931473103431,0.720248519221397,2.71268672104287,5.64702942956021,2.0498195245576,4.8724896771059,7.50239775143145,1.07783996466421,0.567318240503458,1.23165786914764,0.657587197282725,0.834141747676794,1.39300866608867,2.46938563689532,1.19420560091096,0,0,0,2.69263504296152,3.75241695969754,4.8616756594474,5.68187365404505,4.13204886669548,4.01094493507183,4.18561100550734,6.9751084363901,8.75740067753771,4.44311594766397,6.07419617092652,8.67436262140656,6.14039947186396,7.02560368931362,10.3338942445486,5.04695876553905,2.16099685996497,0,0.264450566663544,2.13288250535234,1.39342003116263,1.54640953586512,1.21010114774006,1.11189021922435,0.951128130562796,0.949058123089023,0.823494773620054,0.251335208800269,0.795825888164603,1.16978452271472,2.69645822596266,0.216138049874694,0.199141273254367,1.51734320762465,1.94222471436539,0,1.4255592949172,1.74557238450863,1.82353131714828,1.13825766823663,1.03327103585722,0.784993639206874,0.863780147452604,2.07516838961004,0.667380422864376,1.17935397067922,1.79889689907883,0.608580364165509,0.964708639009667,1.2731292589071,3.74004978686054,2.2698931748505,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,2.77836765741823,0.896987067609561,3.37710464954357,14.7802552133284,2.08440552947533,14.0149879740142,16.8047634917436,17.1323881250607,18.0906758037161,20.7097967570832,24.5868396300827,26.7979744980525,25.6899039992579,31.412589425525,26.7097202986653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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110532 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D6RGS1,D6RDS5 | |||
|association_with_transcript=0bp_to_ENSMUST00000105404,ENSMUST00000126073,ENSMUST00000149738,ENSMUST00000156583_5end | |||
|cluster_id=chr10:76880952..76880973,- | |||
|description=CAGE_peak_2_at_Adarb1_5end | |||
|id=chr10:76880952..76880973,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.75e-17!114;UBERON:0004111!2.15e-16!122;UBERON:0002048!2.02e-09!14;UBERON:0000117!2.02e-09!14;UBERON:0000171!2.02e-09!14;UBERON:0000170!2.02e-09!14;UBERON:0005597!2.02e-09!14;UBERON:0000118!2.02e-09!14;UBERON:0004535!2.62e-08!23;UBERON:0001009!2.62e-08!23;UBERON:0000477!4.44e-08!154;UBERON:0007100!4.74e-08!18;UBERON:0000948!4.74e-08!18;UBERON:0005498!4.74e-08!18;UBERON:0004140!4.74e-08!18;UBERON:0009881!4.74e-08!18;UBERON:0004141!4.74e-08!18;UBERON:0003084!4.74e-08!18;UBERON:0007005!4.74e-08!18;UBERON:0004139!4.74e-08!18;UBERON:0004291!4.74e-08!18;UBERON:0005153!9.47e-08!17;UBERON:0000033!1.31e-07!63;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002346!5.40e-07!71;UBERON:0003075!5.40e-07!71;UBERON:0007284!5.40e-07!71;UBERON:0002616!7.89e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.50e-16,114;UBERON:0004111,3.43e-15,122;UBERON:0010314,2.48e-12,92;UBERON:0002048,6.62e-10,14;UBERON:0000117,6.62e-10,14;UBERON:0000171,6.62e-10,14;UBERON:0000170,6.62e-10,14;UBERON:0005597,6.62e-10,14;UBERON:0000118,6.62e-10,14;UBERON:0004535,1.01e-08,23;UBERON:0001009,1.01e-08,23;UBERON:0007100,1.89e-08,18;UBERON:0000948,1.89e-08,18;UBERON:0005498,1.89e-08,18;UBERON:0004140,1.89e-08,18;UBERON:0009881,1.89e-08,18;UBERON:0004141,1.89e-08,18;UBERON:0003084,1.89e-08,18;UBERON:0007005,1.89e-08,18;UBERON:0004139,1.89e-08,18;UBERON:0004291,1.89e-08,18;UBERON:0005153,8.10e-08,17;UBERON:0000073,3.66e-07,54 | |||
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| |||
|short_description=p2@Adarb1 | |||
}} |
Latest revision as of 08:00, 26 September 2015
Short description: | p2@Adarb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Adarb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000105404, ENSMUST00000126073, ENSMUST00000149738, ENSMUST00000156583_5end |
EntrezGene: | Adarb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 3.50e-16 | 114 |
anatomical conduit | 3.43e-15 | 122 |
structure with developmental contribution from neural crest | 2.48e-12 | 92 |
lung | 6.62e-10 | 14 |
respiratory tube | 6.62e-10 | 14 |
respiration organ | 6.62e-10 | 14 |
pair of lungs | 6.62e-10 | 14 |
lung primordium | 6.62e-10 | 14 |
lung bud | 6.62e-10 | 14 |
cardiovascular system | 1.01e-08 | 23 |
circulatory system | 1.01e-08 | 23 |
primary circulatory organ | 1.89e-08 | 18 |
heart | 1.89e-08 | 18 |
primitive heart tube | 1.89e-08 | 18 |
primary heart field | 1.89e-08 | 18 |
anterior lateral plate mesoderm | 1.89e-08 | 18 |
heart tube | 1.89e-08 | 18 |
heart primordium | 1.89e-08 | 18 |
cardiac mesoderm | 1.89e-08 | 18 |
cardiogenic plate | 1.89e-08 | 18 |
heart rudiment | 1.89e-08 | 18 |
epithelial bud | 8.10e-08 | 17 |
regional part of nervous system | 3.66e-07 | 54 |