FFCP PHASE1:Hg19::chr2:238233102..238233125,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:238233102..238233125,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238233102..238233125,- | |||
|id=chr2:238233102..238233125,- | |||
|ontology_enrichment_celltype=CL:0000055!2.67e-33!180;CL:0000057!5.78e-29!75;CL:0000048!1.04e-15!430;CL:0000723!7.48e-15!436;CL:0000034!4.14e-14!444;CL:0000183!3.46e-13!59;CL:0000680!7.39e-13!57;CL:0000056!7.39e-13!57;CL:0000355!7.39e-13!57;CL:0000187!1.76e-12!54;CL:0002620!6.39e-12!23;CL:0000393!4.37e-10!60;CL:0000211!4.37e-10!60;CL:0002320!1.69e-09!365;CL:0002371!2.66e-08!591;CL:0000192!1.21e-07!42;CL:0000514!1.21e-07!42;CL:0000134!2.14e-07!358;CL:0000499!4.59e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.17e-11;23!CL:0002570;1.87e-09;8!CL:0000723;2.04e-09;61!CL:0000134;3.62e-09;55!CL:0000057;2.25e-08;73!CL:0000048;5.61e-08;58!CL:0000499;5.80e-08;28!CL:0002320;1.02e-07;188!CL:0000188;1.23e-07;9!CL:0002552;1.71e-07;5!CL:0000034;2.01e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-19,76;CL:0000048,2.83e-14,427;CL:0000723,1.02e-13,433;CL:0000034,5.37e-13,441;CL:0002320,3.30e-12,361;CL:0002620,1.07e-10,23;CL:0002570,8.56e-10,8;CL:0000134,1.53e-09,354;CL:0000499,4.87e-08,28;CL:0000188,1.70e-07,9;CL:0000219,1.74e-07,386;CL:0002552,2.56e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.89e-14!83;UBERON:0002329!1.89e-14!83;UBERON:0003077!1.89e-14!83;UBERON:0003059!1.89e-14!83;UBERON:0007282!1.89e-14!83;UBERON:0009618!1.89e-14!83;UBERON:0007285!1.89e-14!83;UBERON:0004290!9.80e-13!70;UBERON:0001134!3.24e-11!61;UBERON:0002036!3.24e-11!61;UBERON:0003082!3.24e-11!61;UBERON:0002385!3.49e-11!63;UBERON:0001015!3.49e-11!63;UBERON:0000383!3.49e-11!63;UBERON:0003102!8.17e-11!95;UBERON:0000486!3.29e-10!82;UBERON:0002384!7.42e-10!375;UBERON:0005256!3.37e-09!143;UBERON:0002199!3.67e-09!45;UBERON:0002416!3.67e-09!45;UBERON:0002097!2.89e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.98e-08;198!UBERON:0002199;3.00e-07;46!UBERON:0002416;3.00e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-12,371;UBERON:0002199,3.49e-10,46;UBERON:0002416,3.49e-10,46;UBERON:0003102,4.08e-09,99;UBERON:0002097,3.58e-08,41 | |||
|phase1_expression=1.45342703416445,2.35510576280081,0,3.00219895059391,0.893922188854576,0,0,0.631719873426831,2.61185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,1.60896258848061,1.65698687863958,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,2.01210257911091,0,1.44575660953827,3.00802746381534,1.30361867064741,1.5905718941022,1.94653948121054,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0.264818361626438,7.17091551872034,0.709336764396714,0,2.1349799145941,0.24666754841716,0.622422070799533,1.0776853765575,0,1.81628913173918,4.60940739583999,0.468642863667593,1.24864030732128,0,1.79338416662161,0.587172493218824,0.323745888736263,0.421352420106746,1.83738754129404,1.22834317311768,1.23990937410919,1.18800285728205,2.47266929278557,0,0.718618141816238,1.34668891163253,0.250237039743928,0,0.438977620880838,0.612975591598039,0.751190294532984,0.226864366320042,6.27863724911017,1.70845911054854,2.7551147150743,4.80145753735044,0.412210116953756,2.06112432036503,1.11670113798954,4.21940830603166,0.584622030967192,5.04867548488229,1.38074847963449,0,6.74518225781567,1.10827308050404,1.01736355386293,0,0,0,0,0,0.116193942869518,0,0,0,0,1.92972281457866,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,1.16344544182,0,3.381211010224,1.59562869950922,2.08014873822732,0.771622122786426,2.83698264046557,0,1.42977993658148,1.62786481617433,0,1.95441710576241,0,1.58390374586686,0,0,0,0,0,0,0.239624855491583,0,0,1.01346914667305,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,5.00170521059677,1.62759014219841,1.03985430765404,2.14114786556594,0.630809660135739,1.40569697991256,0.601892199455438,0,0,1.99267679560631,0.184369168541703,0.868836144680828,1.37060810223918,2.40200396667599,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0.841980283299221,0.512556597022804,0,1.93024705372329,0,2.92998418225046,3.55123450626254,0.657017248110473,2.59627214591811,2.67283870457906,0,0,0,1.26295892981067,4.18809686415449,2.22911505431021,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25671933779759,1.54048617114644,1.5350367472613,0.827019434907183,2.0409846524972,3.33538396002726,1.27839941124151,1.33548053470106,0,0,0,0,1.39453664789186,7.870308670766,0.6970372701606,0,0,0,0,0,1.86079184679834,0.316379424718726,0.38126038784765,1.535386747868,13.2661086290515,0.636406495851874,0,0.899362287916574,0.823611089208164,0.824686816419805,0.202182481573316,0,1.26377536871694,0.48763373908959,0.243713489631284,0,1.9109987597118,3.81794666275024,0,0,0,0,1.73632660280006,1.31178950409327,0.405820753925408,0.6196469961995,0.845086807596724,0.143411352204052,0.196498082026242,0.35667105148125,0,0.211107635297664,1.64647446479951,0.75894634753143,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0,0,0,0.822251547880505,0,0,0,0,1.06726497369676,0,0,0,0.171594997861965,0,0,0,0,0,2.14196257036276,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,2.5926644736038,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,1.49254802886874,2.33713309847224,2.21922344601045,2.65164207385125,10.062716070103,6.22867855117575,1.14420034198462,3.4783112465545,1.5543720058278,1.18284119991707,0.318593534327405,0,0.931577741257556,4.56176828624941,2.39257543102195,1.04349012362347,0.150257608997218,0.380805212168795,2.03435366602331,1.63663793282303,0.214821114084977,0.464033759878494,1.59238355479446,0,1.71697852591396,3.03074539889327,0,0,0,0,0,0.926089897295336,0,0,0,0.219284049578707,0.530067437837643,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.41070377476274,3.062454773532,0,0,0,0,0,0,0,0,0,0,0,0,4.57658514560601,0,0.397832444232549,0.0752103283492573,0.60511520611056,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,3.42976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,3.20684545892101,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0,0,0.437119121007915,0,0.490296643507811,0,0,0,0.8453114551668,1.18948980281472,0,0.0644578879735772,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,7.43990036333503,2.77305377178851,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0.606351566874658,0,0.342233301085281,0,0,0.99798106963804,0,0,0,0,0,0.122241444182866,2.44137706989443,0.665756774185513,0,0 | |||
|short_description=p@chr2:238233102..238233125,- | |||
}} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238233102..238233125, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238233102..238233125, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-19 | 76 |
multi fate stem cell | 2.83e-14 | 427 |
somatic stem cell | 1.02e-13 | 433 |
stem cell | 5.37e-13 | 441 |
connective tissue cell | 3.30e-12 | 361 |
skin fibroblast | 1.07e-10 | 23 |
mesenchymal stem cell of adipose | 8.56e-10 | 8 |
mesenchymal cell | 1.53e-09 | 354 |
stromal cell | 4.87e-08 | 28 |
cell of skeletal muscle | 1.70e-07 | 9 |
motile cell | 1.74e-07 | 386 |
fibroblast of gingiva | 2.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.53e-12 | 371 |
integument | 3.49e-10 | 46 |
integumental system | 3.49e-10 | 46 |
surface structure | 4.08e-09 | 99 |
skin of body | 3.58e-08 | 41 |