FFCP PHASE1:Hg19::chr2:74517672..74517682,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |||
|TSSclassifier=strong | |||
|UniProt=C9JNL6 | |||
|association_with_transcript=149bp_to_ENST00000432728_5end | |||
|cluster_id=chr2:74517672..74517682,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_11_at_SLC4A5_5end | |||
|id=chr2:74517672..74517682,- | |||
|ontology_enrichment_celltype=CL:0000080!1.11e-10!6;CL:0000784!2.71e-10!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.99e-32;5!UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!8.23e-22!3;UBERON:0005290!8.23e-22!3;UBERON:0010096!8.23e-22!3;UBERON:0002298!1.66e-08!8;UBERON:0002336!6.68e-08!1;UBERON:0001018!6.68e-08!1;UBERON:0002473!6.68e-08!1;UBERON:0005340!6.68e-08!1;UBERON:0002316!6.68e-08!1;UBERON:0003544!6.68e-08!1;UBERON:0001020!6.68e-08!1;UBERON:0005970!6.68e-08!1;UBERON:0002437!6.68e-08!1;UBERON:0002046!9.87e-07!5;UBERON:0004117!9.87e-07!5;UBERON:0007689!9.87e-07!5;UBERON:0007123!9.87e-07!5;UBERON:0003091!9.87e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.99e-32;5!UBERON:0001896;1.71e-14;3!UBERON:0005290;1.71e-14;3!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0002298;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.34e-32,5;UBERON:0004117,2.34e-32,5;UBERON:0007689,2.34e-32,5;UBERON:0007123,2.34e-32,5;UBERON:0003091,2.34e-32,5;UBERON:0009722,2.33e-15,11;UBERON:0007690,2.33e-15,11;UBERON:0001896,1.40e-14,3;UBERON:0005290,1.40e-14,3;UBERON:0010096,1.40e-14,3;UBERON:0008814,8.47e-10,18;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0002298,5.92e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0.535081656179426,1.04535523804977,0,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.887432412294818,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4308741204795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14564884900697,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@SLC4A5 | |||
}} |
Latest revision as of 10:33, 18 September 2015
Short description: | p11@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC4A5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 149bp_to_ENST00000432728_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | C9JNL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.34e-32 | 5 |
pharyngeal pouch | 2.34e-32 | 5 |
thyroid diverticulum | 2.34e-32 | 5 |
pharyngeal pouch 2 | 2.34e-32 | 5 |
thyroid primordium | 2.34e-32 | 5 |
entire pharyngeal arch endoderm | 2.33e-15 | 11 |
early pharyngeal endoderm | 2.33e-15 | 11 |
medulla oblongata | 1.40e-14 | 3 |
myelencephalon | 1.40e-14 | 3 |
future myelencephalon | 1.40e-14 | 3 |
pharyngeal arch system | 8.47e-10 | 18 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
brainstem | 5.92e-08 | 6 |