FFCP PHASE1:Hg19::chr2:9695847..9695966,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |||
|TSSclassifier=strong | |||
|UniProt=P78536,E7EUI5,A6H8L4,B2RNB2,A8K1B4 | |||
|association_with_transcript=0bp_to_ENST00000310823,ENST00000478059,ENST00000497134,ENST00000538558,NM_003183,uc002qzu.2,uc002qzv.2,uc010ewy.2,uc010ewz.2,uc010exb.1_5end | |||
|cluster_id=chr2:9695847..9695966,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ADAM17_5end | |||
|id=chr2:9695847..9695966,- | |||
|ontology_enrichment_celltype=CL:0002057!5.38e-22!42;CL:0000766!2.50e-21!76;CL:0000860!7.21e-19!45;CL:0002009!8.90e-19!65;CL:0000557!9.47e-19!71;CL:0002194!6.81e-18!63;CL:0000576!6.81e-18!63;CL:0000040!6.81e-18!63;CL:0000559!6.81e-18!63;CL:0000738!2.33e-16!140;CL:0000839!4.73e-16!70;CL:0000763!4.84e-15!112;CL:0000049!4.84e-15!112;CL:0002087!1.70e-12!119;CL:0000037!4.19e-12!172;CL:0000566!4.19e-12!172;CL:0002032!4.81e-12!165;CL:0000837!4.81e-12!165;CL:0002031!9.61e-12!124;CL:0000988!5.99e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.63e-19;33!CL:0002057;3.63e-19;33!CL:0000473;3.51e-15;39!CL:0000234;3.51e-15;39!CL:0000576;1.24e-14;48!CL:0000766;3.81e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.22e-24,72;CL:0000860,5.38e-22,42;CL:0002057,5.38e-22,42;CL:0002009,1.29e-21,61;CL:0000557,2.09e-21,67;CL:0000473,7.35e-21,48;CL:0000234,7.35e-21,48;CL:0002194,1.07e-20,59;CL:0000576,1.07e-20,59;CL:0000040,1.07e-20,59;CL:0000559,1.07e-20,59;CL:0000839,1.89e-18,66;CL:0000738,7.06e-18,136;CL:0000763,1.07e-16,108;CL:0000049,1.07e-16,108;CL:0002087,6.73e-14,115;CL:0000037,3.34e-13,168;CL:0002032,3.63e-13,161;CL:0000837,3.63e-13,161;CL:0002031,4.69e-13,120;CL:0000988,3.42e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-16;42 | |||
|ontology_enrichment_disease=DOID:0050687!5.09e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.09e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.64e-19!102;UBERON:0003061!5.64e-19!102;UBERON:0002193!2.22e-18!112;UBERON:0002371!1.03e-15!80;UBERON:0001474!3.73e-13!86;UBERON:0002405!1.83e-12!115;UBERON:0004765!1.41e-11!101;UBERON:0001434!1.41e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.78e-21,98;UBERON:0003061,4.78e-21,98;UBERON:0002193,2.79e-20,108;UBERON:0002371,7.35e-18,76;UBERON:0002405,8.59e-17,93;UBERON:0004765,4.25e-15,90;UBERON:0001474,5.89e-15,82;UBERON:0001434,1.04e-12,100 | |||
|phase1_expression=31.0670028552652,19.0549466262975,40.0310507632558,10.007329835313,13.8557939272459,14.8297549097063,7.59899634504932,8.84407822797563,14.626395179191,9.82935746006035,4.88460817580699,13.3249236999405,8.96807725976742,17.9461211792068,18.8896504164912,10.7572023432284,19.2862248967673,18.2577522596843,20.4931775492013,10.7115320526805,4.89601658986207,6.58254915103984,35.493262404251,22.447405711953,31.6367451778903,11.1563572392009,10.8372778073928,11.1769309465425,26.7487708257255,46.8271865678599,46.7544692414549,11.0330546937471,7.53014796945625,17.7481924880058,24.6345697845359,19.0506771533145,12.6248188913984,87.5312745480366,58.5589786612814,75.7367938798323,32.0199128163092,42.4300702484863,35.0302771982494,57.8684990342668,91.4459783726919,72.532634295157,103.895779496841,166.111826760818,125.740786583412,124.283113483169,143.193834949767,144.963606921703,186.507413278511,216.237369000582,177.408697438588,68.8966962725933,103.158524721866,90.338840746924,158.245372355757,235.240976846777,163.670304204555,77.5150555438783,99.5323651531943,100.162816375183,213.303790392009,260.997203357924,214.873675903473,91.957011483968,127.241832094529,128.575796065429,153.166074166242,289.097944250238,230.701080444405,30.2095059426077,21.0478256965393,18.2403021592287,32.3506457701906,20.1237036407618,28.6091544320803,36.1966184551386,19.6927510427099,21.5543701442268,36.9592113368778,32.2221780644658,32.022333139088,32.4314969150545,27.6273231054849,36.7841561570869,30.4080641481037,25.7594513724548,28.4606484554724,35.8214685516273,36.3159566718967,29.0776922873857,51.0062792313198,15.8030450865046,12.7861350573992,10.6112905942274,12.5416914389701,10.1983762188314,13.6887351986108,4.2610302516126,1.94826728407911,12.9236129986801,13.5518717438425,9.30442357251209,7.85331204918545,8.06975314271754,7.67350150603282,6.9063919933544,5.80335037350282,11.5921234294021,7.71090128442714,6.68852070224283,5.22677619024884,13.8237398091031,14.562378756873,5.84166657320471,9.86776798876061,18.1582286164735,24.0900877926875,17.1081368000707,18.5207396465661,18.4300720062362,21.2382235138988,20.5996209278295,12.3169199538157,12.9028315663829,12.5696892018248,16.0755088309907,7.31420598941885,19.4503249314054,18.795796590999,15.5418835525363,9.5254203020819,10.5737958841401,20.6774346233286,11.6792368872633,34.5052082648848,27.7161746828205,22.1343659946678,18.664518258424,8.74308691902101,5.93255108455087,44.7875403243463,49.9752346048897,15.0242495386318,14.3094374583205,28.0277506282263,19.3157900691374,23.2552016619045,16.3444573070164,20.1341490932405,23.7429335608084,22.6529695553349,20.358735103565,13.3756778583559,32.3020948961661,43.0477177850919,27.447090246703,14.0990260988201,12.9246257972147,11.9590408198603,15.8095124548724,10.5318453224629,22.5035315275881,16.3906442017104,21.5087927723145,7.66583187329416,11.3911879148175,14.839341258363,90.9284880308836,131.845289810431,4.36094052142534,17.3940183093361,21.9070785179723,28.7327922364685,50.77008187254,18.4427558743146,14.5776176037,26.6872489324262,17.020060840784,39.5238014957703,22.2272608914985,24.3558235639053,22.7036141467397,22.47086105472,12.1847144553574,10.3012825354006,19.3960419325113,6.42629326372745,25.953024200272,10.5217413839285,8.9888516289439,22.2528046667834,14.6172837601004,28.621241385687,22.572054288359,17.0614181202204,5.46096817162816,2.87447256726495,10.4368390651521,12.5118519871964,24.3816421626081,11.8523957637826,15.017901994152,22.0849946592697,11.002921766522,21.7061459183523,16.4439189390297,22.252849621754,28.8087452241026,19.5799805553034,22.4147269839697,15.6338159318535,35.4430297706659,16.8566018928874,17.9227979713321,20.6191772958751,12.4467463750485,28.0457578088125,10.1759619209917,10.0040749463188,26.2834760302084,32.4567883503093,35.2769652328475,10.7336861394044,10.7349112340403,9.64409725817003,13.2686150419674,8.32658807889574,10.9493207722749,10.9514672630871,14.7945415784364,8.28809528114883,16.2528774811193,15.1594691150613,7.45332840251016,8.26064981382698,8.67639707580535,6.94852028214082,6.53638332277218,7.59265981155509,7.9550471814497,8.43752300038988,9.61867892365976,22.1446636387394,8.41450642820675,6.173610169971,7.3504355692771,13.9430538304014,13.7595810334868,16.5421173870793,5.29755719297581,18.9402195356395,27.6224174580626,24.5840639315321,13.4882103909143,12.9682374411004,26.2951184250224,10.1000574646201,3.11980435583874,18.7630744632855,27.9392275989935,37.8055995439346,26.5634263880376,13.8895653772983,29.6796477485973,15.0138835612262,7.72637545885385,24.8679176148271,29.0165288772655,21.9974120187318,27.1828118561653,33.0924792551753,31.899396879537,28.3004931741001,15.9848666182679,11.8848630541215,47.7883340759065,18.9304133128436,17.8302179365064,20.3209134317916,13.8866676769018,9.71517782670186,9.54971063895694,7.03304683260282,13.6857956818164,13.5732290368387,7.50857644609794,10.861404439962,17.8288424109124,13.950722202665,17.3078354537442,14.6077038806289,7.153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| |||
|short_description=p1@ADAM17 | |||
}} |
Latest revision as of 00:51, 19 September 2015
Short description: | p1@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAM17_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000310823, ENST00000478059, ENST00000497134, ENST00000538558, NM_003183, uc002qzu.2, uc002qzv.2, uc010ewy.2, uc010ewz.2, uc010exb.1_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | P78536E7EUI5A6H8L4B2RNB2A8K1B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.22e-24 | 72 |
classical monocyte | 5.38e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.38e-22 | 42 |
macrophage dendritic cell progenitor | 1.29e-21 | 61 |
granulocyte monocyte progenitor cell | 2.09e-21 | 67 |
defensive cell | 7.35e-21 | 48 |
phagocyte | 7.35e-21 | 48 |
monopoietic cell | 1.07e-20 | 59 |
monocyte | 1.07e-20 | 59 |
monoblast | 1.07e-20 | 59 |
promonocyte | 1.07e-20 | 59 |
myeloid lineage restricted progenitor cell | 1.89e-18 | 66 |
leukocyte | 7.06e-18 | 136 |
myeloid cell | 1.07e-16 | 108 |
common myeloid progenitor | 1.07e-16 | 108 |
nongranular leukocyte | 6.73e-14 | 115 |
hematopoietic stem cell | 3.34e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.63e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 4.69e-13 | 120 |
hematopoietic cell | 3.42e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.78e-21 | 98 |
blood island | 4.78e-21 | 98 |
hemolymphoid system | 2.79e-20 | 108 |
bone marrow | 7.35e-18 | 76 |
immune system | 8.59e-17 | 93 |
skeletal element | 4.25e-15 | 90 |
bone element | 5.89e-15 | 82 |
skeletal system | 1.04e-12 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.09e-07 | 143 |