FFCP PHASE1:Mm9::chr11:72925249..72925292,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=9|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:72925249..72925292,+|id=chr11:72925249..72925292,+|ontology_enrichment_celltype=CL:0002563!1.41e-07!9;CL:0002251!1.41e-07!9|ontology_enrichment_celltype_v019_2=CL:0002250,6.14e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.73e-14!59;UBERON:0002108!9.65e-12!16;UBERON:0000160!2.63e-11!43;UBERON:0000344!1.49e-10!15;UBERON:0001264!3.02e-09!12;UBERON:0003922!3.02e-09!12;UBERON:0002114!3.02e-09!12;UBERON:0003923!3.02e-09!12;UBERON:0003924!3.02e-09!12;UBERON:0003921!3.02e-09!12;UBERON:0001045!2.33e-08!13;UBERON:0001242!4.10e-08!13;UBERON:0000060!4.10e-08!13;UBERON:0001262!4.10e-08!13;UBERON:0004786!4.10e-08!13;UBERON:0003350!1.41e-07!9;UBERON:0004808!1.41e-07!9;UBERON:0001277!1.41e-07!9;UBERON:0003100!9.56e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.04e-15,15;UBERON:0001264,2.91e-14,12;UBERON:0001962,7.75e-11,2;UBERON:0001961,7.75e-11,2;UBERON:0001744,7.75e-11,2;UBERON:0004923,2.22e-09,24;UBERON:0001242,2.28e-09,13;UBERON:0001262,2.28e-09,13;UBERON:0004786,2.28e-09,13;UBERON:0002075,7.38e-09,19;UBERON:0001301,6.14e-08,3;UBERON:0006555,6.14e-08,3;UBERON:0005103,6.14e-08,3;UBERON:0000083,6.14e-08,3;UBERON:0009201,6.14e-08,3;UBERON:0004819,6.14e-08,3;UBERON:0006553,6.14e-08,3;UBERON:0003074,6.14e-08,3;UBERON:0003060,6.14e-08,3;UBERON:0002465,1.65e-07,3;UBERON:0003886,1.97e-07,38;UBERON:0002553,3.24e-07,39;UBERON:0000331,4.97e-07,3;UBERON:0002116,4.97e-07,3;UBERON:0001204,4.97e-07,3;UBERON:0001168,4.97e-07,3|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.6787927191189,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,2.52350209173887,0,0,0.646413698057667,0,1.00812051903972,1.10865255327652,0,0,0,4.33277429626912,0.498703936075477,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,21.2287117084287,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.178065603667255,0.162886959353576,1.97964147567043,0,1.69946445308487,1.51161778482376,1.32023555829129,0.295301892880773,0.614870295887855,0.775284879504663,1.45413491791002,1.78248689192361,1.26414703174326,0,0,0,0.36012218806262,0.129358683782755,0,0.709360934569094,0,0.164549020602121,0,0,0,0,0.8244312647074,0,0.241251699712623,0.596861720015682,1.14898629821543,0.582961673259701,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.539457385539283,0.41326727862668,0.785267825952089,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0.187682475451182,3.84618410961257,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr11:72925249..72925292,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:72925249..72925292,+ | |||
|description=CAGE_peak_at_chr11:72925249..72925292,+ | |||
|id=chr11:72925249..72925292,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.41e-07!9;CL:0002251!1.41e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,6.14e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.73e-14!59;UBERON:0002108!9.65e-12!16;UBERON:0000160!2.63e-11!43;UBERON:0000344!1.49e-10!15;UBERON:0001264!3.02e-09!12;UBERON:0003922!3.02e-09!12;UBERON:0002114!3.02e-09!12;UBERON:0003923!3.02e-09!12;UBERON:0003924!3.02e-09!12;UBERON:0003921!3.02e-09!12;UBERON:0001045!2.33e-08!13;UBERON:0001242!4.10e-08!13;UBERON:0000060!4.10e-08!13;UBERON:0001262!4.10e-08!13;UBERON:0004786!4.10e-08!13;UBERON:0003350!1.41e-07!9;UBERON:0004808!1.41e-07!9;UBERON:0001277!1.41e-07!9;UBERON:0003100!9.56e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.04e-15,15;UBERON:0001264,2.91e-14,12;UBERON:0001962,7.75e-11,2;UBERON:0001961,7.75e-11,2;UBERON:0001744,7.75e-11,2;UBERON:0004923,2.22e-09,24;UBERON:0001242,2.28e-09,13;UBERON:0001262,2.28e-09,13;UBERON:0004786,2.28e-09,13;UBERON:0002075,7.38e-09,19;UBERON:0001301,6.14e-08,3;UBERON:0006555,6.14e-08,3;UBERON:0005103,6.14e-08,3;UBERON:0000083,6.14e-08,3;UBERON:0009201,6.14e-08,3;UBERON:0004819,6.14e-08,3;UBERON:0006553,6.14e-08,3;UBERON:0003074,6.14e-08,3;UBERON:0003060,6.14e-08,3;UBERON:0002465,1.65e-07,3;UBERON:0003886,1.97e-07,38;UBERON:0002553,3.24e-07,39;UBERON:0000331,4.97e-07,3;UBERON:0002116,4.97e-07,3;UBERON:0001204,4.97e-07,3;UBERON:0001168,4.97e-07,3 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,1.6787927191189,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,2.52350209173887,0,0,0.646413698057667,0,1.00812051903972,1.10865255327652,0,0,0,4.33277429626912,0.498703936075477,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,21.2287117084287,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.178065603667255,0.162886959353576,1.97964147567043,0,1.69946445308487,1.51161778482376,1.32023555829129,0.295301892880773,0.614870295887855,0.775284879504663,1.45413491791002,1.78248689192361,1.26414703174326,0,0,0,0.36012218806262,0.129358683782755,0,0.709360934569094,0,0.164549020602121,0,0,0,0,0.8244312647074,0,0.241251699712623,0.596861720015682,1.14898629821543,0.582961673259701,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.539457385539283,0.41326727862668,0.785267825952089,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0.187682475451182,3.84618410961257,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:72925249..72925292,+ | |||
}} |
Latest revision as of 22:37, 3 August 2015
Short description: | p@chr11:72925249..72925292, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:72925249..72925292, + |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 6.14e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.04e-15 | 15 |
pancreas | 2.91e-14 | 12 |
gut-associated lymphoid tissue | 7.75e-11 | 2 |
mucosa-associated lymphoid tissue | 7.75e-11 | 2 |
lymphoid tissue | 7.75e-11 | 2 |
organ component layer | 2.22e-09 | 24 |
intestinal mucosa | 2.28e-09 | 13 |
wall of intestine | 2.28e-09 | 13 |
gastrointestinal system mucosa | 2.28e-09 | 13 |
viscus | 7.38e-09 | 19 |
epididymis | 6.14e-08 | 3 |
excretory tube | 6.14e-08 | 3 |
mesonephric epithelium | 6.14e-08 | 3 |
mesonephric tubule | 6.14e-08 | 3 |
nephric duct | 6.14e-08 | 3 |
kidney epithelium | 6.14e-08 | 3 |
renal duct | 6.14e-08 | 3 |
mesonephric duct | 6.14e-08 | 3 |
pronephric duct | 6.14e-08 | 3 |
lymphoid system | 1.65e-07 | 3 |
body cavity precursor | 1.97e-07 | 38 |
anatomical cavity | 3.24e-07 | 39 |
ileal mucosa | 4.97e-07 | 3 |
ileum | 4.97e-07 | 3 |
mucosa of small intestine | 4.97e-07 | 3 |
wall of small intestine | 4.97e-07 | 3 |