FFCP PHASE1:Hg19::chr3:169490834..169490863,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55892 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14955 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPC7,B2R6C9 | |||
|association_with_transcript=0bp_to_ENST00000349841,ENST00000356716,ENST00000392733,NM_001185118,NM_018657,NR_033702,NR_033703,uc003fft.2,uc003ffu.2,uc003ffv.2,uc011bpm.1_5end | |||
|cluster_id=chr3:169490834..169490863,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_4_at_MYNN_5end | |||
|id=chr3:169490834..169490863,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.75e-14!53;CL:0000051!1.75e-14!53;CL:0000838!7.26e-14!52;CL:0000738!1.38e-12!140;CL:0000037!6.10e-12!172;CL:0000566!6.10e-12!172;CL:0000988!1.87e-11!182;CL:0002031!5.38e-10!124;CL:0002087!7.07e-10!119;CL:0002032!4.89e-09!165;CL:0000837!4.89e-09!165;CL:0000945!1.24e-08!24;CL:0000826!1.24e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.35e-18;53!CL:0000623;2.43e-17;3!CL:0000791;2.44e-14;18!CL:0000789;2.44e-14;18!CL:0002419;2.44e-14;18!CL:0000084;6.02e-13;25!CL:0000945;8.95e-10;24!CL:0000624;4.99e-09;6!CL:0000784;4.80e-08;3!CL:0000226;7.71e-08;3!CL:0000767;7.71e-08;3!CL:0000842;7.71e-08;3!CL:0002032;8.24e-07;1!CL:0000557;8.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.28e-29,52;CL:0000542,5.51e-29,53;CL:0000051,5.51e-29,53;CL:0000738,4.23e-19,136;CL:0000623,2.31e-17,3;CL:0000825,2.31e-17,3;CL:0000988,2.77e-16,177;CL:0000037,6.33e-16,168;CL:0000791,2.35e-14,18;CL:0000789,2.35e-14,18;CL:0002420,2.35e-14,18;CL:0002419,2.35e-14,18;CL:0000790,2.35e-14,18;CL:0002087,4.40e-14,115;CL:0000084,6.04e-13,25;CL:0000827,6.04e-13,25;CL:0002031,6.37e-12,120;CL:0002032,2.95e-11,161;CL:0000837,2.95e-11,161;CL:0000945,8.54e-10,24;CL:0000826,8.54e-10,24;CL:0000236,5.17e-09,14;CL:0000624,5.20e-09,6;CL:0000784,3.68e-08,3;CL:0000226,6.72e-08,3;CL:0000767,6.72e-08,3;CL:0000842,6.72e-08,3;CL:0000817,7.72e-08,3;CL:0000946,9.48e-07,1;CL:0000786,9.48e-07,1;CL:0000980,9.48e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.35e-18;53!CL:0000790;2.44e-14;18 | |||
|ontology_enrichment_disease=DOID:0060058!6.53e-09!10;DOID:1749!6.86e-08!14;DOID:14566!2.26e-07!239;DOID:162!3.05e-07!235;DOID:0050687!6.08e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,1.18009283054671,1.53531759238885,0.464448369948228,0,0,0,2.78881922089086,0.853015394924529,0.293600439334847,0,0.802177789880567,0.868043482863407,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0,0.19891667719909,0.547992461293902,0,0,0,0,0.400395987036012,1.14950487990897,0,0,1.1384259382189,0.587237189370939,1.52909291250092,0,2.24203425192614,0,7.08155172409799,5.50215067848831,4.31763147898969,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0.579606171470105,0.741432815810302,0.535081656179426,1.04535523804977,0,0.383220493601921,0.68725489096526,1.01207876807801,0,0,0,0,0,0,0,0,7.66105624253983,5.34880391567015,7.24122019413995,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.715471872916026,1.71598473234038,2.22874500797739,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0.573609190778008,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,4.3346767244424,3.66566877261179,4.62034930607094,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0,0,0,1.24060815673732,0.862856803274467,1.49418580924822,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,1.14851441245126,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0.557409525377156,1.00988449083511,0.924843963529383,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0.63337622438398,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0.472775363535873,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0,0.697118721393016,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,1.77912677208373,0.123563938946503,0.208843899010911,0.067401132980677,0.802577647298789,0,0.91227394607833,0.391329237864179,0.242780379534093,0,0,0,0,6.91487729306666,0,0,0.330991955875499,0.627865836814451,0,0,0,0,0.293977192243133,0.261177619741208,0,0,0,0.0730893170861856,0.164230914106418,0,0.176512253383001,0,0,0,0.126621591911757,0.391102765469606,0,0,0,0.288180834308212,0.229073192331831,0.686379991447858,0.288109595976299,0.124252535565433,0,0,0.209205692624666,0,0,0,0.273810757783986,2.55493176133945,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0.196854963029498,0.76205998859206,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,9.2856234546954,0.0607495566580247,0.335434687599266,0,0,0.316801009558219,0,1.34340638123612,0,0,0.76280561296425,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58330377895165,0.638341257770182,0.544017803369474,0,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0.276697269872462,0.37494122388632,0.303298235083296,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.245772908753719,0,1.19992437512958,0.106691729694141,0.172214979660816,0,0.368211900503681,0,0,0.383683113910955,0,0.786329709279482,0.327628914576042,0,0.425149840203366,0.371807292777007,0,0,0.394308725006267,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0.785181748008205,0,0.183428598521679,0.231051332300676,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,1.05522746615772,0.255524855279191,0.535701835878287,0,0,0,0,1.95897778844825,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0.173858272302579,0,0,0.85359238546975,0.691259661814092,0,0.473328002922261,0.255640214277473,0,0,1.24082554265728,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0.233939463462106,0.397901550322736,0.237840181555137,0.11294608203896,0.219881033490858,0.452888530700021,0,0,0,0,0,0,0,0.4226557275834,0.169927114687817,0.0939839179798536,0,0.299823467774787,0.178553938605658,1.41157948686277,0.160482733378337,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.275684698604535,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.248298857183432,0.33639558774184,0,0,0.435433495793923,0.342233301085281,0.134704106029175,0.143444410785353,0,0.0814032686109745,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p4@MYNN | |||
}} |
Latest revision as of 14:59, 16 September 2015
Short description: | p4@MYNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYNN_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000349841, ENST00000356716, ENST00000392733, NM_001185118, NM_018657, NR_033702, NR_033703, uc003fft.2, uc003ffu.2, uc003ffv.2, uc011bpm.1_5end |
EntrezGene: | MYNN |
HGNC: | 14955 |
UniProt: | Q9NPC7B2R6C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.28e-29 | 52 |
lymphocyte | 5.51e-29 | 53 |
common lymphoid progenitor | 5.51e-29 | 53 |
leukocyte | 4.23e-19 | 136 |
natural killer cell | 2.31e-17 | 3 |
pro-NK cell | 2.31e-17 | 3 |
hematopoietic cell | 2.77e-16 | 177 |
hematopoietic stem cell | 6.33e-16 | 168 |
mature alpha-beta T cell | 2.35e-14 | 18 |
alpha-beta T cell | 2.35e-14 | 18 |
immature T cell | 2.35e-14 | 18 |
mature T cell | 2.35e-14 | 18 |
immature alpha-beta T cell | 2.35e-14 | 18 |
nongranular leukocyte | 4.40e-14 | 115 |
T cell | 6.04e-13 | 25 |
pro-T cell | 6.04e-13 | 25 |
hematopoietic lineage restricted progenitor cell | 6.37e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.95e-11 | 161 |
lymphocyte of B lineage | 8.54e-10 | 24 |
pro-B cell | 8.54e-10 | 24 |
B cell | 5.17e-09 | 14 |
CD4-positive, alpha-beta T cell | 5.20e-09 | 6 |
plasmacytoid dendritic cell | 3.68e-08 | 3 |
single nucleate cell | 6.72e-08 | 3 |
basophil | 6.72e-08 | 3 |
mononuclear cell | 6.72e-08 | 3 |
precursor B cell | 7.72e-08 | 3 |
antibody secreting cell | 9.48e-07 | 1 |
plasma cell | 9.48e-07 | 1 |
plasmablast | 9.48e-07 | 1 |