FFCP PHASE1:Mm9::chr12:57354175..57354199,+: Difference between revisions
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{{FFCP|EntrezGene=100503961|HGNC=|MCL_coexpression_id=139|UniProt=|association_with_transcript=-30bp_to_NR_045048_5end|description=CAGE_peak_1_at_Gm19990_5end|id=chr12:57354175..57354199,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!5.09e-24!14;UBERON:0000117!5.09e-24!14;UBERON:0000171!5.09e-24!14;UBERON:0000170!5.09e-24!14;UBERON:0005597!5.09e-24!14;UBERON:0000118!5.09e-24!14;UBERON:0005178!1.70e-21!17;UBERON:0005181!1.70e-21!17;UBERON:0002224!1.70e-21!17;UBERON:0000915!1.70e-21!17;UBERON:0008947!1.70e-21!17;UBERON:0003258!1.70e-21!17;UBERON:0005153!5.15e-19!17;UBERON:0000310!7.70e-11!6;UBERON:0001443!7.70e-11!6;UBERON:0005157!1.96e-10!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.47e-47,14;UBERON:0000117,2.47e-47,14;UBERON:0000171,2.47e-47,14;UBERON:0000170,2.47e-47,14;UBERON:0005597,2.47e-47,14;UBERON:0000118,2.47e-47,14;UBERON:0005153,1.39e-38,17;UBERON:0005178,1.39e-38,17;UBERON:0005181,1.39e-38,17;UBERON:0002224,1.39e-38,17;UBERON:0000915,1.39e-38,17;UBERON:0008947,1.39e-38,17;UBERON:0003258,1.39e-38,17;UBERON:0005157,1.87e-32,20;UBERON:0000310,6.15e-17,6;UBERON:0001443,6.15e-17,6;UBERON:0000065,1.25e-14,41;UBERON:0001004,3.19e-14,42;UBERON:0009569,1.52e-09,66;UBERON:0005911,5.12e-09,69;UBERON:0005177,1.51e-07,79;UBERON:0001041,2.02e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01850340712568,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,2.77129785249907,0.757965647081939,3.42226450528254,4.2436271443797,12.6732734075791,22.7808510120869,14.0445748122748,12.6836871107569,4.72905432318573,7.0868700687608,4.62418829106713,3.76885623846197,5.00786447411097,3.32692834737477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,1.31098110457835,0.960377286073039,1.32101578597911,0.476293691283074,1.0429589335037,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.70990322463735,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.182927972872773,1.57841826862706,0.271608227691724,0.561142271657738,1.06771516311757,0.591026894253381,0.818462086339379,1.08455788830176,0.771626443924566,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p1@Gm19990}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100503961 | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_NR_045048_5end | |||
|cluster_id=chr12:57354175..57354199,+ | |||
|description=CAGE_peak_1_at_Gm19990_5end | |||
|id=chr12:57354175..57354199,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.09e-24!14;UBERON:0000117!5.09e-24!14;UBERON:0000171!5.09e-24!14;UBERON:0000170!5.09e-24!14;UBERON:0005597!5.09e-24!14;UBERON:0000118!5.09e-24!14;UBERON:0005178!1.70e-21!17;UBERON:0005181!1.70e-21!17;UBERON:0002224!1.70e-21!17;UBERON:0000915!1.70e-21!17;UBERON:0008947!1.70e-21!17;UBERON:0003258!1.70e-21!17;UBERON:0005153!5.15e-19!17;UBERON:0000310!7.70e-11!6;UBERON:0001443!7.70e-11!6;UBERON:0005157!1.96e-10!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.47e-47,14;UBERON:0000117,2.47e-47,14;UBERON:0000171,2.47e-47,14;UBERON:0000170,2.47e-47,14;UBERON:0005597,2.47e-47,14;UBERON:0000118,2.47e-47,14;UBERON:0005153,1.39e-38,17;UBERON:0005178,1.39e-38,17;UBERON:0005181,1.39e-38,17;UBERON:0002224,1.39e-38,17;UBERON:0000915,1.39e-38,17;UBERON:0008947,1.39e-38,17;UBERON:0003258,1.39e-38,17;UBERON:0005157,1.87e-32,20;UBERON:0000310,6.15e-17,6;UBERON:0001443,6.15e-17,6;UBERON:0000065,1.25e-14,41;UBERON:0001004,3.19e-14,42;UBERON:0009569,1.52e-09,66;UBERON:0005911,5.12e-09,69;UBERON:0005177,1.51e-07,79;UBERON:0001041,2.02e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01850340712568,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,2.77129785249907,0.757965647081939,3.42226450528254,4.2436271443797,12.6732734075791,22.7808510120869,14.0445748122748,12.6836871107569,4.72905432318573,7.0868700687608,4.62418829106713,3.76885623846197,5.00786447411097,3.32692834737477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.26348605881899,0.760437899670719,1.32038438970253,1.31098110457835,0.960377286073039,1.32101578597911,0.476293691283074,1.0429589335037,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.70990322463735,0.953744759789284,0.872078499793971,0.658765662907314,0.592302255241736,0.182927972872773,1.57841826862706,0.271608227691724,0.561142271657738,1.06771516311757,0.591026894253381,0.818462086339379,1.08455788830176,0.771626443924566,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p1@Gm19990 | |||
}} |
Latest revision as of 16:34, 26 September 2015
Short description: | p1@Gm19990 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19990_5end |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | -30bp_to_NR_045048_5end |
EntrezGene: | Gm19990 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.47e-47 | 14 |
respiratory tube | 2.47e-47 | 14 |
respiration organ | 2.47e-47 | 14 |
pair of lungs | 2.47e-47 | 14 |
lung primordium | 2.47e-47 | 14 |
lung bud | 2.47e-47 | 14 |
epithelial bud | 1.39e-38 | 17 |
thoracic cavity element | 1.39e-38 | 17 |
thoracic segment organ | 1.39e-38 | 17 |
thoracic cavity | 1.39e-38 | 17 |
thoracic segment of trunk | 1.39e-38 | 17 |
respiratory primordium | 1.39e-38 | 17 |
endoderm of foregut | 1.39e-38 | 17 |
epithelial fold | 1.87e-32 | 20 |
breast | 6.15e-17 | 6 |
chest | 6.15e-17 | 6 |
respiratory tract | 1.25e-14 | 41 |
respiratory system | 3.19e-14 | 42 |
subdivision of trunk | 1.52e-09 | 66 |
endo-epithelium | 5.12e-09 | 69 |
trunk region element | 1.51e-07 | 79 |
foregut | 2.02e-07 | 80 |