FFCP PHASE1:Hg19::chr3:191047259..191047267,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18111 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVM0 | |||
|association_with_transcript=385bp_to_ENST00000392456,NM_174908,NM_178335,uc003fsv.2,uc003fsw.2_5end | |||
|cluster_id=chr3:191047259..191047267,+ | |||
|description=CAGE_peak_8_at_CCDC50_5end | |||
|id=chr3:191047259..191047267,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.88e-12!24;CL:0000071!7.42e-10!18;CL:0002546!7.42e-10!18;CL:0000115!6.44e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.68e-31;24!CL:0000071;1.35e-23;18!CL:0000115;2.35e-19;36!CL:1000413;1.68e-15;9!CL:0002078;1.28e-13;45!CL:0000213;1.91e-10;58!CL:0000215;1.91e-10;58!CL:0002544;3.32e-09;6!CL:0002543;6.62e-09;6!CL:0002138;6.62e-09;6!CL:0000784;3.24e-08;3!CL:0000346;3.24e-08;3!CL:1000428;3.24e-08;3!CL:0000167;4.01e-07;1!CL:0000164;4.01e-07;1!CL:0000502;4.01e-07;1!CL:0000172;4.01e-07;1!CL:0000173;4.01e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.13e-31,24;CL:0000071,6.31e-24,18;CL:0002546,6.31e-24,18;CL:0000115,1.58e-23,36;CL:0002078,2.72e-18,45;CL:1000413,1.13e-15,9;CL:0000213,1.33e-13,58;CL:0000215,1.33e-13,58;CL:0002544,2.52e-09,6;CL:0002543,5.33e-09,6;CL:0005020,7.81e-09,6;CL:0002138,7.81e-09,6;CL:0005022,7.81e-09,6;CL:0000346,2.01e-08,3;CL:1000428,2.01e-08,3;CL:0000784,4.86e-08,3;CL:0000167,3.78e-07,1;CL:0000164,3.78e-07,1;CL:0000502,3.78e-07,1;CL:0000172,3.78e-07,1;CL:0000173,3.78e-07,1;CL:0002351,3.78e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;1.35e-23;18!CL:0005022;6.62e-09;6!CL:0002351;4.01e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;4.01e-07;1!DOID:2355;4.01e-07;1!DOID:3371;8.97e-07;1!DOID:4549;8.97e-07;1!DOID:5861;8.97e-07;1!DOID:6496;8.97e-07;1!DOID:12603;8.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.78e-07,1;DOID:2355,4.78e-07,1;DOID:3371,5.37e-07,1;DOID:4549,5.37e-07,1;DOID:5861,5.37e-07,1;DOID:6496,5.37e-07,1;DOID:12603,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.42e-10!18;UBERON:0004638!7.42e-10!18;UBERON:0004852!7.42e-10!18;UBERON:0000055!5.66e-09!69;UBERON:0004111!2.16e-08!241;UBERON:0002049!3.80e-07!79;UBERON:0007798!3.80e-07!79;UBERON:0000025!5.29e-07!194;UBERON:0000487!5.61e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.35e-23;18!UBERON:0001986;1.35e-23;18!UBERON:0004852;1.35e-23;18!UBERON:0000487;4.90e-19;22!UBERON:0006914;1.42e-16;25!UBERON:0003915;1.68e-15;9!UBERON:0004700;1.68e-15;9!UBERON:0001917;1.68e-15;9!UBERON:0000490;1.27e-11;33!UBERON:0000412;3.24e-08;3!UBERON:0001992;3.24e-08;3!UBERON:0000055;3.77e-08;65!UBERON:0007500;5.43e-07;56!UBERON:0001981;5.43e-07;56!UBERON:0004537;5.43e-07;56!UBERON:0001473;8.71e-07;8!UBERON:0004536;8.71e-07;8!UBERON:0006558;8.71e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.31e-24,18;UBERON:0001986,6.31e-24,18;UBERON:0004852,6.31e-24,18;UBERON:0000487,2.65e-19,22;UBERON:0006914,8.33e-17,25;UBERON:0003915,1.13e-15,9;UBERON:0004700,1.13e-15,9;UBERON:0001917,1.13e-15,9;UBERON:0000055,3.30e-11,68;UBERON:0004535,8.18e-10,109;UBERON:0001009,1.84e-09,112;UBERON:0002049,1.92e-09,78;UBERON:0007798,1.92e-09,78;UBERON:0000412,2.01e-08,3;UBERON:0001992,2.01e-08,3;UBERON:0007500,1.03e-07,59;UBERON:0001981,1.03e-07,59;UBERON:0004537,1.03e-07,59;UBERON:0006965,1.03e-07,59;UBERON:0001473,9.84e-07,8;UBERON:0004536,9.84e-07,8;UBERON:0006558,9.84e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.764134057479513,0.985207073399349,0.944529375764151,0,0,0,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0.605399502633369,0.736555271975129,0,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0,0,1.14950487990897,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,1.14398982156026,1.11437250398869,1.78886166630035,0.860234595106124,3.12426451446835,3.95715559346807,0,1.37559020970034,1.25396979922086,1.03366703667732,2.49036383880697,1.33888245105868,0.402829317109147,1.52054421143703,0.488124115096339,0.735326160691737,0,1.42879565254528,0.22452937262617,0.900891843866578,0,2.84779697870439,1.28241220751285,0,0,0,0,0.633152558322899,0.132409180813219,0,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0,0,0,0.674338760312407,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.355123450626254,0,0,0,0,0,0.184161977871793,0.34444334449382,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0.384380134730212,0.255225424989168,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.30062222588003,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,6.18938660922518,1.11443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0.755798243562828,0,0.861593638227486,0.622079175323615,0.179736702294654,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.683652335082007,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0.442287822516696,0,5.33738031625119,3.21266241260907,3.23708043466912,0.134802265961354,0,0,0.182454789215666,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0.450970258243478,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0.580537987734511,0.65780385377567,0.246346371159628,0.0969890164884194,1.588610280447,0,0,0,0.126621591911757,0,0.160317640503067,0.640358984218058,0.39961921916426,0,0.114536596165916,5.66263492944483,0.432164393964449,0,0,0.271808412147228,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.393915911536118,0.906574442192831,0.404421263125109,0.0984274815147488,2.03215996957883,0,0.136203406111576,0.160753148465019,0,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0.739202355635845,0.179287339332845,0.575745591958336,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.170388021785422,0.453248366080503,0.879313402068495,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.592834895693833,0,0,0,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.248385611765534,0,0.624902039810533,0.151649117541648,0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| |||
|short_description=p8@CCDC50 | |||
}} |
Latest revision as of 10:31, 17 September 2015
Short description: | p8@CCDC50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCDC50_5end |
Coexpression cluster: | NA |
Association with transcript: | 385bp_to_ENST00000392456, NM_174908, NM_178335, uc003fsv.2, uc003fsw.2_5end |
EntrezGene: | CCDC50 |
HGNC: | 18111 |
UniProt: | Q8IVM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.13e-31 | 24 |
blood vessel endothelial cell | 6.31e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.31e-24 | 18 |
endothelial cell | 1.58e-23 | 36 |
meso-epithelial cell | 2.72e-18 | 45 |
endothelial cell of artery | 1.13e-15 | 9 |
lining cell | 1.33e-13 | 58 |
barrier cell | 1.33e-13 | 58 |
aortic endothelial cell | 2.52e-09 | 6 |
vein endothelial cell | 5.33e-09 | 6 |
lymphangioblast | 7.81e-09 | 6 |
endothelial cell of lymphatic vessel | 7.81e-09 | 6 |
vascular lymphangioblast | 7.81e-09 | 6 |
hair follicle dermal papilla cell | 2.01e-08 | 3 |
stem cell of epidermis | 2.01e-08 | 3 |
plasmacytoid dendritic cell | 4.86e-08 | 3 |
peptide hormone secreting cell | 3.78e-07 | 1 |
enteroendocrine cell | 3.78e-07 | 1 |
type D enteroendocrine cell | 3.78e-07 | 1 |
somatostatin secreting cell | 3.78e-07 | 1 |
pancreatic D cell | 3.78e-07 | 1 |
progenitor cell of endocrine pancreas | 3.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.31e-24 | 18 |
endothelium | 6.31e-24 | 18 |
cardiovascular system endothelium | 6.31e-24 | 18 |
simple squamous epithelium | 2.65e-19 | 22 |
squamous epithelium | 8.33e-17 | 25 |
endothelial tube | 1.13e-15 | 9 |
arterial system endothelium | 1.13e-15 | 9 |
endothelium of artery | 1.13e-15 | 9 |
vessel | 3.30e-11 | 68 |
cardiovascular system | 8.18e-10 | 109 |
circulatory system | 1.84e-09 | 112 |
vasculature | 1.92e-09 | 78 |
vascular system | 1.92e-09 | 78 |
dermal papilla | 2.01e-08 | 3 |
papillary layer of dermis | 2.01e-08 | 3 |
epithelial tube open at both ends | 1.03e-07 | 59 |
blood vessel | 1.03e-07 | 59 |
blood vasculature | 1.03e-07 | 59 |
vascular cord | 1.03e-07 | 59 |
lymphatic vessel | 9.84e-07 | 8 |
lymph vasculature | 9.84e-07 | 8 |
lymphatic part of lymphoid system | 9.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.78e-07 | 1 |
anemia | 4.78e-07 | 1 |
chondrosarcoma | 5.37e-07 | 1 |
extraosseous chondrosarcoma | 5.37e-07 | 1 |
myxoid chondrosarcoma | 5.37e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 5.37e-07 | 1 |
acute leukemia | 8.49e-07 | 1 |