FFCP PHASE1:Mm9::chr13:52678090..52678104,+: Difference between revisions
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{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=48|UniProt=P48025|association_with_transcript=-437bp_to_ENSMUST00000120135_5end|description=CAGE_peak_13_at_Syk_5end|id=chr13:52678090..52678104,+|ontology_enrichment_celltype=CL:0000553!4.38e-07!6;CL:0000556!4.38e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,3.17e-21,6;CL:0000556,3.17e-21,6;CL:0000050,4.01e-14,9;CL:0000839,1.41e-13,13;CL:0002031,6.36e-12,25;CL:0000763,5.94e-11,16;CL:0000049,3.75e-09,19;CL:0000988,4.21e-09,32;CL:0002032,4.21e-09,32;CL:0000037,4.21e-09,32;CL:0000837,4.21e-09,32;CL:0002027,2.07e-07,3;CL:0002006,2.07e-07,3;CL:0002024,2.07e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.52e-07!70;UBERON:0002204!5.78e-07!32;UBERON:0003081!6.51e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.07e-13,22;UBERON:0004765,1.07e-13,22;UBERON:0001434,1.07e-13,22;UBERON:0002106,1.51e-13,6;UBERON:0004457,1.51e-13,6;UBERON:0000042,1.51e-13,6;UBERON:0004854,1.51e-13,6;UBERON:0009034,1.51e-13,6;UBERON:0002095,1.51e-13,6;UBERON:0004782,1.51e-13,6;UBERON:0003281,1.51e-13,6;UBERON:0009664,1.51e-13,6;UBERON:0002296,1.51e-13,6;UBERON:0005602,1.51e-13,6;UBERON:0001179,1.51e-13,6;UBERON:0006293,1.51e-13,6;UBERON:0003887,1.97e-12,10;UBERON:0002204,1.90e-11,32;UBERON:0002193,4.92e-11,48;UBERON:0002405,4.92e-11,48;UBERON:0002371,5.94e-11,16;UBERON:0002390,9.31e-10,45;UBERON:0003061,9.31e-10,45;UBERON:0003081,8.29e-08,87|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,2.09868563438444,8.83294063003066,8.91243818437302,8.06340338416257,0.0850432901510698,0.893618560807968,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,1.36609096991689,0.971020706062307,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,17.2816084239468,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0.289198713839823,0.884610551949874,0.323533699894818,2.87093973998512,1.93950101254089,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0,0,2.36373244159177,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,0,0,0,0.624075346229121,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0.690739927463582,0.723245292907558,0,1.63171705145613,0.983528546038072,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0,0.120625849856312,0,0.492422699235184,0,0,2.22132145037209,0,0.555583582109135,1.69531611304222,3.69074414846768,2.28778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0.632022241256357,0.202725215290164,0,0,0,0.198681354781265,0.360586348559907,0.443068581523732,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0.695603506861264|short_description=p13@Syk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=P48025 | |||
|association_with_transcript=-437bp_to_ENSMUST00000120135_5end | |||
|cluster_id=chr13:52678090..52678104,+ | |||
|description=CAGE_peak_13_at_Syk_5end | |||
|id=chr13:52678090..52678104,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.38e-07!6;CL:0000556!4.38e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.17e-21,6;CL:0000556,3.17e-21,6;CL:0000050,4.01e-14,9;CL:0000839,1.41e-13,13;CL:0002031,6.36e-12,25;CL:0000763,5.94e-11,16;CL:0000049,3.75e-09,19;CL:0000988,4.21e-09,32;CL:0002032,4.21e-09,32;CL:0000037,4.21e-09,32;CL:0000837,4.21e-09,32;CL:0002027,2.07e-07,3;CL:0002006,2.07e-07,3;CL:0002024,2.07e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.52e-07!70;UBERON:0002204!5.78e-07!32;UBERON:0003081!6.51e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.07e-13,22;UBERON:0004765,1.07e-13,22;UBERON:0001434,1.07e-13,22;UBERON:0002106,1.51e-13,6;UBERON:0004457,1.51e-13,6;UBERON:0000042,1.51e-13,6;UBERON:0004854,1.51e-13,6;UBERON:0009034,1.51e-13,6;UBERON:0002095,1.51e-13,6;UBERON:0004782,1.51e-13,6;UBERON:0003281,1.51e-13,6;UBERON:0009664,1.51e-13,6;UBERON:0002296,1.51e-13,6;UBERON:0005602,1.51e-13,6;UBERON:0001179,1.51e-13,6;UBERON:0006293,1.51e-13,6;UBERON:0003887,1.97e-12,10;UBERON:0002204,1.90e-11,32;UBERON:0002193,4.92e-11,48;UBERON:0002405,4.92e-11,48;UBERON:0002371,5.94e-11,16;UBERON:0002390,9.31e-10,45;UBERON:0003061,9.31e-10,45;UBERON:0003081,8.29e-08,87 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,2.09868563438444,8.83294063003066,8.91243818437302,8.06340338416257,0.0850432901510698,0.893618560807968,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,0.588231488031014,1.36609096991689,0.971020706062307,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,17.2816084239468,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0.289198713839823,0.884610551949874,0.323533699894818,2.87093973998512,1.93950101254089,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0,0,2.36373244159177,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0,0,0.232533944750408,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,0,0,0,0.624075346229121,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0.690739927463582,0.723245292907558,0,1.63171705145613,0.983528546038072,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0,0.120625849856312,0,0.492422699235184,0,0,2.22132145037209,0,0.555583582109135,1.69531611304222,3.69074414846768,2.28778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0.632022241256357,0.202725215290164,0,0,0,0.198681354781265,0.360586348559907,0.443068581523732,0.100966449948148,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.429742108096597,0,0.441182838239031,0.695603506861264 | |||
|short_description=p13@Syk | |||
}} |
Latest revision as of 17:35, 1 October 2015
Short description: | p13@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | -437bp_to_ENSMUST00000120135_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.17e-21 | 6 |
megakaryocyte | 3.17e-21 | 6 |
megakaryocyte-erythroid progenitor cell | 4.01e-14 | 9 |
myeloid lineage restricted progenitor cell | 1.41e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 6.36e-12 | 25 |
myeloid cell | 5.94e-11 | 16 |
common myeloid progenitor | 3.75e-09 | 19 |
hematopoietic cell | 4.21e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.21e-09 | 32 |
hematopoietic stem cell | 4.21e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.21e-09 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 2.07e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.07e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.07e-13 | 22 |
skeletal element | 1.07e-13 | 22 |
skeletal system | 1.07e-13 | 22 |
spleen | 1.51e-13 | 6 |
cavity lining | 1.51e-13 | 6 |
serous membrane | 1.51e-13 | 6 |
gastrointestinal system mesentery | 1.51e-13 | 6 |
stomach region | 1.51e-13 | 6 |
mesentery | 1.51e-13 | 6 |
gastrointestinal system serosa | 1.51e-13 | 6 |
mesentery of stomach | 1.51e-13 | 6 |
gut mesentery | 1.51e-13 | 6 |
dorsal mesentery | 1.51e-13 | 6 |
dorsal mesogastrium | 1.51e-13 | 6 |
peritoneal cavity | 1.51e-13 | 6 |
spleen primordium | 1.51e-13 | 6 |
intraembryonic coelom | 1.97e-12 | 10 |
musculoskeletal system | 1.90e-11 | 32 |
hemolymphoid system | 4.92e-11 | 48 |
immune system | 4.92e-11 | 48 |
bone marrow | 5.94e-11 | 16 |
hematopoietic system | 9.31e-10 | 45 |
blood island | 9.31e-10 | 45 |
lateral plate mesoderm | 8.29e-08 | 87 |