FFCP PHASE1:Hg19::chr3:99984127..99984138,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:99984127..99984138,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr3:99984127..99984138,+ | |||
|id=chr3:99984127..99984138,+ | |||
|ontology_enrichment_celltype=CL:0002573!1.01e-07!2;CL:0000511!6.23e-07!1;CL:0002625!6.23e-07!1;CL:0000216!6.23e-07!1;CL:0002174!7.35e-07!1;CL:0000501!7.35e-07!1;CL:0000077!8.39e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000511;4.66e-66;1!CL:0002625;4.66e-66;1!CL:0000216;4.66e-66;1!CL:0000138;2.19e-12;6!CL:0000154;2.74e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000151;1.26e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.66e-66,1;CL:0002625,4.66e-66,1;CL:0000216,4.66e-66,1;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000154,2.74e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!5.58e-07!1;DOID:4549!5.58e-07!1;DOID:5861!5.58e-07!1;DOID:6496!5.58e-07!1;DOID:178!6.59e-07!1;DOID:326!6.59e-07!1;DOID:3978!6.59e-07!1;DOID:3394!6.59e-07!1;DOID:5844!6.59e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:4362;1.60e-14;5!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:4362,1.60e-14,5;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001801!6.53e-09!14;UBERON:0007625!1.84e-07!11;UBERON:0001136!6.23e-07!1;UBERON:0001343!6.23e-07!1;UBERON:0004910!6.23e-07!1;UBERON:0005154!6.23e-07!1;UBERON:0005295!6.23e-07!1;UBERON:0004813!6.23e-07!1;UBERON:0005297!6.23e-07!1;UBERON:0005294!6.23e-07!1;UBERON:0010141!6.23e-07!1;UBERON:0005891!6.23e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.66e-66;1!UBERON:0001343;4.66e-66;1!UBERON:0004910;4.66e-66;1!UBERON:0004813;4.66e-66;1!UBERON:0004909;7.05e-34;2!UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0000002;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0000473;1.47e-09;8!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.66e-66,1;UBERON:0001343,4.66e-66,1;UBERON:0004910,4.66e-66,1;UBERON:0005154,4.66e-66,1;UBERON:0005295,4.66e-66,1;UBERON:0004813,4.66e-66,1;UBERON:0005297,4.66e-66,1;UBERON:0005294,4.66e-66,1;UBERON:0010141,4.66e-66,1;UBERON:0005891,4.66e-66,1;UBERON:0004909,7.05e-34,2;UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6;UBERON:0000473,1.47e-09,8;UBERON:0004871,1.47e-09,8;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50962739701486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,5.73664823494752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0.998395002494955,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0.176689145945881,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:99984127..99984138,+ | |||
}} |
Latest revision as of 00:16, 30 July 2015
Short description: | p@chr3:99984127..99984138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99984127..99984138, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.66e-66 | 1 |
seminiferous tubule epithelial cell | 4.66e-66 | 1 |
Sertoli cell | 4.66e-66 | 1 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
protein secreting cell | 2.74e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.66e-66 | 1 |
seminiferous tubule of testis | 4.66e-66 | 1 |
epithelium of male gonad | 4.66e-66 | 1 |
epithelial cord | 4.66e-66 | 1 |
sex cord | 4.66e-66 | 1 |
seminiferous tubule epithelium | 4.66e-66 | 1 |
testis sex cord | 4.66e-66 | 1 |
genital ridge | 4.66e-66 | 1 |
primitive sex cord of indifferent gonad | 4.66e-66 | 1 |
coelomic epithelium | 4.66e-66 | 1 |
epithelium of gonad | 7.05e-34 | 2 |
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
duct of male reproductive system | 1.03e-17 | 4 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
testis | 1.47e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
cervical cancer | 1.60e-14 | 5 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |