FFCP PHASE1:Mm9::chr14:52525480..52525491,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1362|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:52525480..52525491,-|id=chr14:52525480..52525491,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,8.53e-15,3;CL:0000182,4.80e-09,5;CL:0002610,9.60e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.12e-15!114;UBERON:0004111!2.94e-15!122;UBERON:0001049!3.48e-12!52;UBERON:0005068!3.48e-12!52;UBERON:0006241!3.48e-12!52;UBERON:0007135!3.48e-12!52;UBERON:0002346!5.03e-12!71;UBERON:0003075!5.03e-12!71;UBERON:0007284!5.03e-12!71;UBERON:0001017!9.80e-11!73;UBERON:0005743!9.80e-11!73;UBERON:0000073!1.45e-10!75;UBERON:0001016!1.45e-10!75;UBERON:0002616!2.29e-10!49;UBERON:0004121!3.47e-10!102;UBERON:0000924!3.47e-10!102;UBERON:0006601!3.47e-10!102;UBERON:0000955!6.20e-10!50;UBERON:0006238!6.20e-10!50;UBERON:0002020!3.85e-09!34;UBERON:0000033!8.72e-09!63;UBERON:0000477!2.41e-08!154;UBERON:0003076!3.44e-08!12;UBERON:0003057!3.44e-08!12;UBERON:0000483!6.80e-08!181;UBERON:0000119!1.47e-07!183;UBERON:0002791!8.42e-07!29;UBERON:0003528!8.42e-07!29;UBERON:0001893!8.42e-07!29;UBERON:0002298!9.19e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002038,8.53e-15,3;UBERON:0009663,8.53e-15,3;UBERON:0009661,8.53e-15,3;UBERON:0000125,8.53e-15,3;UBERON:0002308,8.53e-15,3;UBERON:0002950,3.18e-11,4;UBERON:0001891,3.18e-11,4;UBERON:0009616,3.18e-11,4;UBERON:0010286,3.18e-11,4;UBERON:0001896,9.54e-10,2;UBERON:0002298,9.54e-10,2;UBERON:0005290,9.54e-10,2;UBERON:0010096,9.54e-10,2;UBERON:0000025,8.78e-09,114;UBERON:0004111,5.06e-08,122;UBERON:0003914,5.19e-08,47;UBERON:0002107,4.56e-07,22;UBERON:0007499,4.56e-07,22;UBERON:0006925,4.56e-07,22;UBERON:0009497,4.56e-07,22;UBERON:0000015,4.56e-07,22;UBERON:0002423,4.56e-07,22;UBERON:0006235,4.56e-07,22;UBERON:0008835,4.56e-07,22;UBERON:0003894,4.56e-07,22;UBERON:0004161,4.56e-07,22;UBERON:0008836,4.56e-07,22;UBERON:0004684,9.60e-07,3;UBERON:0002275,9.60e-07,3;UBERON:0009854,9.75e-07,23;UBERON:0009856,9.75e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.420649922702764,0.571301968807607,0.441737081903227,0.367472397644862,0,0,0,1.0214987046815,1.99688493233117,0.263772575460388,0,0,1.67509799400829,3.37657566019008,2.29197371665215,0.883885756421003,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0.860423876981386,0,2.15881276655127,1.94932925234301,2.68816132258401,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.925602677324269,0.465067889500816,1.07309360559848,0.700592054203017,0.16455984991348,1.31333971263276,0.243206428637567,1.02339991197733,0.878200461164203,1.47627060636409,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.972811360650212,0,7.18841032636773,0.372140947668503,0.624075346229121,1.01031551178845,1.61457672169721,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,1.40654023910644,0,1.26235463602186,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0,0.515559547031063,2.05524755931193,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0,0.57386499620653,0,0|short_description=p@chr14:52525480..52525491,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1362 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:52525480..52525491,- | |||
|description=CAGE_peak_at_chr14:52525480..52525491,- | |||
|id=chr14:52525480..52525491,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,8.53e-15,3;CL:0000182,4.80e-09,5;CL:0002610,9.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.12e-15!114;UBERON:0004111!2.94e-15!122;UBERON:0001049!3.48e-12!52;UBERON:0005068!3.48e-12!52;UBERON:0006241!3.48e-12!52;UBERON:0007135!3.48e-12!52;UBERON:0002346!5.03e-12!71;UBERON:0003075!5.03e-12!71;UBERON:0007284!5.03e-12!71;UBERON:0001017!9.80e-11!73;UBERON:0005743!9.80e-11!73;UBERON:0000073!1.45e-10!75;UBERON:0001016!1.45e-10!75;UBERON:0002616!2.29e-10!49;UBERON:0004121!3.47e-10!102;UBERON:0000924!3.47e-10!102;UBERON:0006601!3.47e-10!102;UBERON:0000955!6.20e-10!50;UBERON:0006238!6.20e-10!50;UBERON:0002020!3.85e-09!34;UBERON:0000033!8.72e-09!63;UBERON:0000477!2.41e-08!154;UBERON:0003076!3.44e-08!12;UBERON:0003057!3.44e-08!12;UBERON:0000483!6.80e-08!181;UBERON:0000119!1.47e-07!183;UBERON:0002791!8.42e-07!29;UBERON:0003528!8.42e-07!29;UBERON:0001893!8.42e-07!29;UBERON:0002298!9.19e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,8.53e-15,3;UBERON:0009663,8.53e-15,3;UBERON:0009661,8.53e-15,3;UBERON:0000125,8.53e-15,3;UBERON:0002308,8.53e-15,3;UBERON:0002950,3.18e-11,4;UBERON:0001891,3.18e-11,4;UBERON:0009616,3.18e-11,4;UBERON:0010286,3.18e-11,4;UBERON:0001896,9.54e-10,2;UBERON:0002298,9.54e-10,2;UBERON:0005290,9.54e-10,2;UBERON:0010096,9.54e-10,2;UBERON:0000025,8.78e-09,114;UBERON:0004111,5.06e-08,122;UBERON:0003914,5.19e-08,47;UBERON:0002107,4.56e-07,22;UBERON:0007499,4.56e-07,22;UBERON:0006925,4.56e-07,22;UBERON:0009497,4.56e-07,22;UBERON:0000015,4.56e-07,22;UBERON:0002423,4.56e-07,22;UBERON:0006235,4.56e-07,22;UBERON:0008835,4.56e-07,22;UBERON:0003894,4.56e-07,22;UBERON:0004161,4.56e-07,22;UBERON:0008836,4.56e-07,22;UBERON:0004684,9.60e-07,3;UBERON:0002275,9.60e-07,3;UBERON:0009854,9.75e-07,23;UBERON:0009856,9.75e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.420649922702764,0.571301968807607,0.441737081903227,0.367472397644862,0,0,0,1.0214987046815,1.99688493233117,0.263772575460388,0,0,1.67509799400829,3.37657566019008,2.29197371665215,0.883885756421003,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0.860423876981386,0,2.15881276655127,1.94932925234301,2.68816132258401,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.925602677324269,0.465067889500816,1.07309360559848,0.700592054203017,0.16455984991348,1.31333971263276,0.243206428637567,1.02339991197733,0.878200461164203,1.47627060636409,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.156998727841375,0,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.972811360650212,0,7.18841032636773,0.372140947668503,0.624075346229121,1.01031551178845,1.61457672169721,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,1.44495530989013,1.40654023910644,0,1.26235463602186,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0.352071715937262,0,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0,0.515559547031063,2.05524755931193,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0,0.57386499620653,0,0 | |||
|short_description=p@chr14:52525480..52525491,- | |||
}} |
Latest revision as of 09:35, 4 August 2015
Short description: | p@chr14:52525480..52525491, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:52525480..52525491, - |
Coexpression cluster: | MCL_coexpression_mm9:1362 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 8.53e-15 | 3 |
hepatocyte | 4.80e-09 | 5 |
raphe nuclei neuron | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 8.53e-15 | 3 |
telencephalic nucleus | 8.53e-15 | 3 |
midbrain nucleus | 8.53e-15 | 3 |
neural nucleus | 8.53e-15 | 3 |
nucleus of brain | 8.53e-15 | 3 |
regional part of midbrain | 3.18e-11 | 4 |
midbrain | 3.18e-11 | 4 |
presumptive midbrain | 3.18e-11 | 4 |
midbrain neural tube | 3.18e-11 | 4 |
medulla oblongata | 9.54e-10 | 2 |
brainstem | 9.54e-10 | 2 |
myelencephalon | 9.54e-10 | 2 |
future myelencephalon | 9.54e-10 | 2 |
tube | 8.78e-09 | 114 |
anatomical conduit | 5.06e-08 | 122 |
epithelial tube | 5.19e-08 | 47 |
liver | 4.56e-07 | 22 |
epithelial sac | 4.56e-07 | 22 |
digestive gland | 4.56e-07 | 22 |
epithelium of foregut-midgut junction | 4.56e-07 | 22 |
anatomical boundary | 4.56e-07 | 22 |
hepatobiliary system | 4.56e-07 | 22 |
foregut-midgut junction | 4.56e-07 | 22 |
hepatic diverticulum | 4.56e-07 | 22 |
liver primordium | 4.56e-07 | 22 |
septum transversum | 4.56e-07 | 22 |
liver bud | 4.56e-07 | 22 |
raphe nuclei | 9.60e-07 | 3 |
reticular formation | 9.60e-07 | 3 |
digestive tract diverticulum | 9.75e-07 | 23 |
sac | 9.75e-07 | 23 |