FFCP PHASE1:Hg19::chrX:107681458..107681465,-: Difference between revisions
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|id=chrX:107681458..107681465,-
|short_description=p7@COL4A6
|description=CAGE_peak_7_at_COL4A6_5end
|association_with_transcript=90bp_to_ENST00000538570,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1288 | |EntrezGene=1288 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2208 | |HGNC=2208 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3Q5,F5H851 | |UniProt=F5H3Q5,F5H851 | ||
|association_with_transcript=90bp_to_ENST00000538570,ENST00000545689_5end | |||
|cluster_id=chrX:107681458..107681465,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_7_at_COL4A6_5end | |||
|id=chrX:107681458..107681465,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002195;1.17e-33;2!CL:0002571;1.17e-33;2!CL:0002591;9.48e-18;1!CL:0002623;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.17e-33,2;CL:0002571,1.17e-33,2;CL:0002591,1.22e-17,1;CL:0002623,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.74e-18;1!UBERON:0004874;3.74e-18;1!UBERON:0009143;9.48e-18;1!UBERON:0009847;8.86e-07;3!UBERON:0003353;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.25e-08!169;UBERON:0000925!2.25e-08!169;UBERON:0006595!2.25e-08!169;UBERON:0000922!3.39e-08!612;UBERON:0002050!3.34e-07!605;UBERON:0005423!3.34e-07!605;UBERON:0000923!8.77e-07!604;UBERON:0005291!8.77e-07!604;UBERON:0006598!8.77e-07!604;UBERON:0002532!8.77e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;3.74e-18;1!UBERON:0008811;3.74e-18;1!UBERON:0001255;9.46e-10;2!UBERON:0001556;9.46e-10;2!UBERON:0000078;1.51e-09;2!UBERON:0002012;1.51e-09;2!UBERON:0008886;1.51e-09;2!UBERON:0002110;6.50e-07;3!UBERON:0001043;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.16e-18,1;UBERON:0008811,3.16e-18,1;UBERON:0006258,3.16e-18,1;UBERON:0005876,3.16e-18,1;UBERON:0004874,3.16e-18,1;UBERON:0001255,1.03e-09,2;UBERON:0001556,1.03e-09,2;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0003929,1.14e-07,54;UBERON:0004119,1.38e-07,160;UBERON:0000925,1.38e-07,160;UBERON:0006595,1.38e-07,160;UBERON:0002110,6.50e-07,3;UBERON:0006242,6.50e-07,3;UBERON:0001043,8.62e-07,3;UBERON:0009143,8.62e-07,3;UBERON:0004145,9.64e-07,3 | |||
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| ||
|short_description=p7@COL4A6 | |||
}} | }} |
Latest revision as of 23:27, 18 September 2015
Short description: | p7@COL4A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL4A6_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 90bp_to_ENST00000538570, ENST00000545689_5end |
EntrezGene: | COL4A6 |
HGNC: | 2208 |
UniProt: | F5H3Q5F5H851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.17e-33 | 2 |
hepatic mesenchymal stem cell | 1.17e-33 | 2 |
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
acinar cell of salivary gland | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
penis | 3.16e-18 | 1 |
intromittent organ | 3.16e-18 | 1 |
lateral plate mesenchyme | 3.16e-18 | 1 |
undifferentiated genital tubercle | 3.16e-18 | 1 |
somatopleure | 3.16e-18 | 1 |
urinary bladder | 1.03e-09 | 2 |
lower urinary tract | 1.03e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.71e-09 | 2 |
developing epithelial placode | 1.71e-09 | 2 |
respiratory system arterial blood vessel | 1.71e-09 | 2 |
respiratory system blood vessel | 1.71e-09 | 2 |
respiratory system artery | 1.71e-09 | 2 |
head blood vessel | 1.71e-09 | 2 |
pulmonary artery | 1.71e-09 | 2 |
pulmonary vascular system | 1.71e-09 | 2 |
pharyngeal vasculature | 1.71e-09 | 2 |
truncus arteriosus | 1.71e-09 | 2 |
aortic sac | 1.71e-09 | 2 |
pharyngeal arch artery | 1.71e-09 | 2 |
gut epithelium | 1.14e-07 | 54 |
endoderm-derived structure | 1.38e-07 | 160 |
endoderm | 1.38e-07 | 160 |
presumptive endoderm | 1.38e-07 | 160 |
gallbladder | 6.50e-07 | 3 |
gall bladder primordium | 6.50e-07 | 3 |
esophagus | 8.62e-07 | 3 |
esophageal region | 8.62e-07 | 3 |
outflow tract | 9.64e-07 | 3 |