FFCP PHASE1:Hg19::chrX:110924878..110924902,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:110924878..110924902,+
|short_description=p3@ALG13
|description=CAGE_peak_3_at_ALG13_5end
|association_with_transcript=0bp_to_ENST00000482742,NR_033132_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79868 | |EntrezGene=79868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30881 | |HGNC=30881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482742,NR_033132_5end | |||
|cluster_id=chrX:110924878..110924902,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_3_at_ALG13_5end | |||
|id=chrX:110924878..110924902,+ | |||
|ontology_enrichment_celltype=CL:0000839!9.63e-25!70;CL:0000557!1.86e-24!71;CL:0000766!4.62e-24!76;CL:0002009!2.14e-23!65;CL:0002194!2.44e-22!63;CL:0000576!2.44e-22!63;CL:0000040!2.44e-22!63;CL:0000559!2.44e-22!63;CL:0000860!2.69e-22!45;CL:0002057!5.45e-22!42;CL:0000738!9.35e-22!140;CL:0002031!1.38e-21!124;CL:0000037!6.54e-20!172;CL:0000566!6.54e-20!172;CL:0002087!1.38e-19!119;CL:0000763!2.12e-19!112;CL:0000049!2.12e-19!112;CL:0002032!1.49e-18!165;CL:0000837!1.49e-18!165;CL:0000988!2.24e-18!182;CL:0000219!8.09e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-22;33!CL:0002057;1.11e-22;33!CL:0000473;5.61e-21;39!CL:0000234;5.61e-21;39!CL:0000576;5.47e-18;48!CL:0000766;1.27e-15;69!CL:0000763;4.74e-08;100!CL:0002087;1.68e-07;104!CL:0000738;5.66e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.94e-33,67;CL:0000473,3.59e-33,48;CL:0000234,3.59e-33,48;CL:0000766,6.97e-33,72;CL:0000839,1.88e-32,66;CL:0002009,5.81e-32,61;CL:0002194,1.81e-30,59;CL:0000576,1.81e-30,59;CL:0000040,1.81e-30,59;CL:0000559,1.81e-30,59;CL:0000860,3.05e-30,42;CL:0002057,3.05e-30,42;CL:0000738,6.92e-29,136;CL:0002031,1.75e-27,120;CL:0002087,1.86e-25,115;CL:0000037,7.53e-25,168;CL:0000763,1.03e-24,108;CL:0000049,1.03e-24,108;CL:0000988,4.04e-24,177;CL:0002032,4.80e-23,161;CL:0000837,4.80e-23,161;CL:0000134,8.79e-08,354;CL:0000219,2.73e-07,386;CL:0002320,5.37e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.93e-22;42!CL:0000049;5.26e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.45e-22!86;UBERON:0002371!3.15e-21!80;UBERON:0002390!4.41e-18!102;UBERON:0003061!4.41e-18!102;UBERON:0004765!1.12e-17!101;UBERON:0001434!1.12e-17!101;UBERON:0002193!1.13e-14!112;UBERON:0002405!1.87e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.71e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.32e-31,82;UBERON:0002371,2.30e-30,76;UBERON:0002390,2.70e-27,98;UBERON:0003061,2.70e-27,98;UBERON:0004765,5.08e-26,90;UBERON:0002193,3.48e-22,108;UBERON:0002405,4.00e-22,93;UBERON:0001434,1.20e-21,100;UBERON:0003135,1.72e-07,11;UBERON:0003081,4.03e-07,203 | |||
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| ||
|short_description=p3@ALG13 | |||
}} | }} |
Latest revision as of 01:59, 19 September 2015
Short description: | p3@ALG13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALG13_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 0bp_to_ENST00000482742, NR_033132_5end |
EntrezGene: | ALG13 |
HGNC: | 30881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.94e-33 | 67 |
defensive cell | 3.59e-33 | 48 |
phagocyte | 3.59e-33 | 48 |
myeloid leukocyte | 6.97e-33 | 72 |
myeloid lineage restricted progenitor cell | 1.88e-32 | 66 |
macrophage dendritic cell progenitor | 5.81e-32 | 61 |
monopoietic cell | 1.81e-30 | 59 |
monocyte | 1.81e-30 | 59 |
monoblast | 1.81e-30 | 59 |
promonocyte | 1.81e-30 | 59 |
classical monocyte | 3.05e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-30 | 42 |
leukocyte | 6.92e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 1.75e-27 | 120 |
nongranular leukocyte | 1.86e-25 | 115 |
hematopoietic stem cell | 7.53e-25 | 168 |
myeloid cell | 1.03e-24 | 108 |
common myeloid progenitor | 1.03e-24 | 108 |
hematopoietic cell | 4.04e-24 | 177 |
hematopoietic oligopotent progenitor cell | 4.80e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.80e-23 | 161 |
mesenchymal cell | 8.79e-08 | 354 |
motile cell | 2.73e-07 | 386 |
connective tissue cell | 5.37e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.32e-31 | 82 |
bone marrow | 2.30e-30 | 76 |
hematopoietic system | 2.70e-27 | 98 |
blood island | 2.70e-27 | 98 |
skeletal element | 5.08e-26 | 90 |
hemolymphoid system | 3.48e-22 | 108 |
immune system | 4.00e-22 | 93 |
skeletal system | 1.20e-21 | 100 |
male reproductive organ | 1.72e-07 | 11 |
lateral plate mesoderm | 4.03e-07 | 203 |