FFCP PHASE1:Hg19::chr4:75230682..75230707,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3443 | |||
|TSSclassifier=strong | |||
|UniProt=O14944,B2RC66 | |||
|association_with_transcript=-152bp_to_ENST00000244869,NM_001432,uc003hid.2,uc003hie.1_5end | |||
|cluster_id=chr4:75230682..75230707,+ | |||
|description=CAGE_peak_2_at_EREG_5end | |||
|id=chr4:75230682..75230707,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-18!42;CL:0000860!1.35e-16!45;CL:0002009!6.35e-12!65;CL:0002194!9.94e-12!63;CL:0000576!9.94e-12!63;CL:0000040!9.94e-12!63;CL:0000559!9.94e-12!63;CL:0000557!6.68e-11!71;CL:0000012!8.87e-11!682;CL:0000766!2.32e-10!76;CL:0000839!1.95e-09!70;CL:0000548!2.18e-09!679;CL:0000004!2.18e-09!679;CL:0000255!2.18e-09!679;CL:0000063!8.53e-09!578;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112;CL:0000003!2.25e-07!722;CL:0002371!7.01e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.18e-13;33!CL:0002057;2.18e-13;33!CL:0000473;6.16e-11;39!CL:0000234;6.16e-11;39!CL:0000576;6.13e-10;48!CL:0000767;1.01e-09;3!CL:0000766;1.24e-07;69!CL:0002583;5.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.62e-18,42;CL:0002057,7.62e-18,42;CL:0000473,4.32e-17,48;CL:0000234,4.32e-17,48;CL:0000766,2.82e-15,72;CL:0002194,2.47e-14,59;CL:0000576,2.47e-14,59;CL:0000040,2.47e-14,59;CL:0000559,2.47e-14,59;CL:0002009,1.05e-13,61;CL:0000557,1.29e-13,67;CL:0000839,2.64e-12,66;CL:0000763,2.26e-11,108;CL:0000049,2.26e-11,108;CL:0000767,5.57e-10,3;CL:0000134,3.05e-07,354;CL:0000037,3.89e-07,168;CL:0000738,5.97e-07,136;CL:0002320,6.77e-07,361;CL:0002583,8.16e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.51e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-10!80;UBERON:0004765!1.07e-09!101;UBERON:0001434!1.07e-09!101;UBERON:0001474!1.18e-09!86;UBERON:0002390!1.42e-07!102;UBERON:0003061!1.42e-07!102;UBERON:0002193!8.72e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.13e-14,76;UBERON:0001474,8.97e-13,82;UBERON:0004765,2.08e-12,90;UBERON:0002390,5.95e-12,98;UBERON:0003061,5.95e-12,98;UBERON:0002405,8.88e-12,93;UBERON:0002193,2.29e-11,108;UBERON:0001434,1.39e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,1.96682138424452,3.45446458287491,2.32224184974114,2.75826367343678,0,0.369754010166788,0,0,3.52320527201817,2.21598163412751,4.61252229181326,4.55722828503289,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.822335776043652,0.929119112685311,1.1507695692886,0,0.47296445977717,2.06847408441971,1.93645405075148,2.70852973188684,0.941211697713023,1.36453075028923,1.79778787556068,0.306083892370903,1.60464513538047,2.55734850319616,0,0,0,1.7412554317715,1.13477044938228,1.24564449799115,1.25624332628372,1.5644487552606,0.868755378820466,1.21079900526674,0,0.949387162322653,0,0.425208599930087,0.209658645508376,0.112328631146495,1.05123824989054,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,1.58030450865046,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0.468642863667593,1.24864030732128,1.1409436430889,0.298897361103602,0.352303495931295,0.161872944368132,0.140450806702248,0.816616685019573,0.982674538494144,0.206651562351531,0,0,1.82032272387605,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0,0.98110732562673,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.439001141634502,0,0.402115889646523,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.977208552881205,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,1.02738161275192,0,0,0,0,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,1.07057393278297,0.157702415033935,0.937131319941706,0,0,1.03473071292505,0,0.184369168541703,2.5196248195744,0,0,1.44737618286021,0.862856803274467,1.17400313583789,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,1.07946785661859,4.08391968220192,0.657017248110473,5.19254429183621,1.04589340613963,0.120859449591622,0,0.276242966807689,0.229628896329213,0.546273504020151,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,1.95018073810956,0,0.580024309752732,0.616194468458578,0.767518373630648,0.689182862422653,0,0,0,0.0890320356467374,0.165284915360978,0.768760269460425,0.382838137483752,0.708104465988849,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.673554789078584,0,0,0,0.86101074534246,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0.561421621224659,0,0,0,0,3.58116727106535,2.07875276582847,4.30024982938925,0.994147647766298,0,1.00177834520615,0,0,0.19924798825107,0,0,0,0,0,3.41499734359842,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,5.33932665614809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0.166211681900156,0.451191321234361,0,0.167821586975843,0,0.158936578980379,0,5.71314828557017,0.282706142867882,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,1.21390189767046,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0,1.17590876897253,0,0,1.0319161948297,0,0,0,0.193978032976839,0,0,0,2.38457534043588,0.0633107959558787,0,0,0.213452994739353,0,0.432271251462318,1.60351234632282,0,0.432164393964449,1.36677789121976,0.471388069233591,0,0,0,0,0,0.136905378891993,6.38732940334862,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0.79318464064088,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0.895528817321244,0.467426619694449,3.32883516901568,0.189403005275089,0,1.77962244319307,0.228840068396924,0,1.24349760466224,0,0.63718706865481,0,0,1.24411862352257,0.53168342911599,0,0,0,0,0.545545977607678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,0.633936370075881,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.733714394086716,0.462102664601353,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,2.28632617667507,0.127762427639595,0,0,0,0,0,0,1.02892805662451,0,0,0.709163045303809,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,2.40724100067505,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,1.22104902916462,0,0,0.718601616852695,0,0,0,0,0,0 | |||
|short_description=p2@EREG | |||
}} |
Latest revision as of 15:49, 18 September 2015
Short description: | p2@EREG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EREG_5end |
Coexpression cluster: | NA |
Association with transcript: | -152bp_to_ENST00000244869, NM_001432, uc003hid.2, uc003hie.1_5end |
EntrezGene: | EREG |
HGNC: | 3443 |
UniProt: | O14944B2RC66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.62e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.62e-18 | 42 |
defensive cell | 4.32e-17 | 48 |
phagocyte | 4.32e-17 | 48 |
myeloid leukocyte | 2.82e-15 | 72 |
monopoietic cell | 2.47e-14 | 59 |
monocyte | 2.47e-14 | 59 |
monoblast | 2.47e-14 | 59 |
promonocyte | 2.47e-14 | 59 |
macrophage dendritic cell progenitor | 1.05e-13 | 61 |
granulocyte monocyte progenitor cell | 1.29e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.64e-12 | 66 |
myeloid cell | 2.26e-11 | 108 |
common myeloid progenitor | 2.26e-11 | 108 |
basophil | 5.57e-10 | 3 |
mesenchymal cell | 3.05e-07 | 354 |
hematopoietic stem cell | 3.89e-07 | 168 |
leukocyte | 5.97e-07 | 136 |
connective tissue cell | 6.77e-07 | 361 |
subcutaneous preadipocyte | 8.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.13e-14 | 76 |
bone element | 8.97e-13 | 82 |
skeletal element | 2.08e-12 | 90 |
hematopoietic system | 5.95e-12 | 98 |
blood island | 5.95e-12 | 98 |
immune system | 8.88e-12 | 93 |
hemolymphoid system | 2.29e-11 | 108 |
skeletal system | 1.39e-10 | 100 |