FFCP PHASE1:Mm9::chr18:24364210..24364221,+: Difference between revisions
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{{FFCP|EntrezGene=14423|HGNC=|UniProt=O08912|association_with_transcript=-46bp_to_ENSMUST00000170243_5end|description=CAGE_peak_6_at_Galnt1_5end|id=chr18:24364210..24364221,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.92e-09!41;UBERON:0001004!1.05e-08!42;UBERON:0002370!4.18e-08!23;UBERON:0000974!4.18e-08!23;UBERON:0004807!4.18e-08!23;UBERON:0005058!4.18e-08!23;UBERON:0003351!4.18e-08!23;UBERON:0009113!4.18e-08!23;UBERON:0003295!4.18e-08!23;UBERON:0009722!4.18e-08!23;UBERON:0005562!4.18e-08!23;UBERON:0007690!4.18e-08!23;UBERON:0006562!5.20e-08!24;UBERON:0001557!5.20e-08!24;UBERON:0001042!5.20e-08!24;UBERON:0008814!5.20e-08!24;UBERON:0009145!5.20e-08!24;UBERON:0003408!3.46e-07!24;UBERON:0000072!3.88e-07!27;UBERON:0004177!6.55e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.52e-14,23;UBERON:0000974,1.52e-14,23;UBERON:0004807,1.52e-14,23;UBERON:0005058,1.52e-14,23;UBERON:0003351,1.52e-14,23;UBERON:0009113,1.52e-14,23;UBERON:0003295,1.52e-14,23;UBERON:0009722,1.52e-14,23;UBERON:0005562,1.52e-14,23;UBERON:0007690,1.52e-14,23;UBERON:0006562,1.10e-13,24;UBERON:0003408,1.10e-13,24;UBERON:0001557,1.10e-13,24;UBERON:0001042,1.10e-13,24;UBERON:0008814,1.10e-13,24;UBERON:0009145,1.10e-13,24;UBERON:0000072,1.25e-12,27;UBERON:0000065,2.59e-12,41;UBERON:0001004,7.84e-12,42;UBERON:0007811,1.65e-11,36;UBERON:0004177,2.63e-10,29;UBERON:0005057,2.63e-10,29;UBERON:0000153,2.28e-09,43;UBERON:0002390,3.52e-09,45;UBERON:0003061,3.52e-09,45;UBERON:0002193,3.58e-08,48;UBERON:0002405,3.58e-08,48;UBERON:0000077,1.36e-07,35;UBERON:0000926,2.73e-07,120;UBERON:0004120,2.73e-07,120;UBERON:0006603,2.73e-07,120;UBERON:0001048,3.40e-07,134;UBERON:0002368,5.13e-07,60|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,2.96983643915625,0.985521055061667,0,1.19852577757853,0.717949430958028,1.36960583944965,1.92324885321794,0.999329285446988,0.404950534779652,0,1.10411757875383,2.60517423850904,3.39511721438424,0.680346321208558,1.29078236561151,0.261199789138935,0.95995453676044,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.504060259519861,0,0,0,0,0,0.831173226792462,0.408338712524738,0,0.7813353445238,1.57057123192139,0,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0.917733760808408,0,0.65407546914134,0.219686182734472,0,0.55994568650145,0,2.18117387875057,0,2.68875039313971,0,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0,0,0.449949858640699,0,0,0.599200221036809,0,0.829516898467821,0.540023753326763,0,0,0.662605622854841,0.734944795289724,0.862609239164127,0,0,0.127687338085188,0.921639199537461,0.791317726381163,0.457438218012048,0,0,0,0.45839474333043,1.17851434189467,0.284743361598206,0.186399445825301,0.605809546665472,0.831287161174641,0.289864488701678,0,0,0,0,0,0.421333260395256,0.681721290312231,0.259786004602869,0.35333957451034,1.40843419776681,0,0,7.11066703153331,0,0.506719730950197,1.01104889002957,0.5709193985953,0.776813650941515,0.29688427812965,0.693941307064543,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.376999773989026,0.494389935468748,0.289198713839823,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,2.03685711660064,0,1.14363204365758,0.898743836428936,0.457500602818626,0.376963056338593,0,0.767146371990992,0.62336413367868,0.324482526135515,1.12023300235348,1.24406970610093,1.26361379216837,0.841767423545896,0.910843100738926,0.919608417733892,0.720248519221397,1.20563854268572,1.36072998302656,1.5373646434182,0.749613796477831,0.517406741478031,1.07783996466421,0.378212160335639,0.351902248327898,0.43839146485515,0,0,0.61734640922383,0.995171334092466,2.1066395619397,0,1.42081749697796,1.03562886267751,1.17263029990548,0.720248245844059,0.23674473558521,0.590292695242212,0.462801338662135,0.697601834251224,0.536546802799238,1.28441876603886,0.987359099480883,1.14917224855367,1.05389452409612,0.877199924551994,1.09775057645525,0.134206418760372,0,0.411618449517138,0.660837565967596,0,0.426576501070468,0.232236671860439,0.257734922644187,0.605050573870028,0,0.760902504450237,0.474529061544512,0.329397909448022,1.00534083520108,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.571242563048644,0,1.01825663922657,0.581857461502877,2.03393877681924,0.822074982615345,0.885660887877613,0.941992367048249,0.987177311374404,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0.72353147925725,0.763877555344259,0,0.324270453550071,1.09824565275233,4.31304619582064,0.744281895337007,0.624075346229121,0.757736633841335,0.179397413521912,0.964887042726734,1.66277871149944,0.757965647081939,0.814824882210129,0.509235257325564,0.704070744865506,0.335012514883631,0.952174563544055,1.17080188714679,0.945810864637146,1.7717175171902,1.75400245523236,0.655453258862952,1.38147985492716,1.01254341007058,0,0,0,0.551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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14423 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=O08912 | |||
|association_with_transcript=-46bp_to_ENSMUST00000170243_5end | |||
|cluster_id=chr18:24364210..24364221,+ | |||
|description=CAGE_peak_6_at_Galnt1_5end | |||
|id=chr18:24364210..24364221,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.92e-09!41;UBERON:0001004!1.05e-08!42;UBERON:0002370!4.18e-08!23;UBERON:0000974!4.18e-08!23;UBERON:0004807!4.18e-08!23;UBERON:0005058!4.18e-08!23;UBERON:0003351!4.18e-08!23;UBERON:0009113!4.18e-08!23;UBERON:0003295!4.18e-08!23;UBERON:0009722!4.18e-08!23;UBERON:0005562!4.18e-08!23;UBERON:0007690!4.18e-08!23;UBERON:0006562!5.20e-08!24;UBERON:0001557!5.20e-08!24;UBERON:0001042!5.20e-08!24;UBERON:0008814!5.20e-08!24;UBERON:0009145!5.20e-08!24;UBERON:0003408!3.46e-07!24;UBERON:0000072!3.88e-07!27;UBERON:0004177!6.55e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.52e-14,23;UBERON:0000974,1.52e-14,23;UBERON:0004807,1.52e-14,23;UBERON:0005058,1.52e-14,23;UBERON:0003351,1.52e-14,23;UBERON:0009113,1.52e-14,23;UBERON:0003295,1.52e-14,23;UBERON:0009722,1.52e-14,23;UBERON:0005562,1.52e-14,23;UBERON:0007690,1.52e-14,23;UBERON:0006562,1.10e-13,24;UBERON:0003408,1.10e-13,24;UBERON:0001557,1.10e-13,24;UBERON:0001042,1.10e-13,24;UBERON:0008814,1.10e-13,24;UBERON:0009145,1.10e-13,24;UBERON:0000072,1.25e-12,27;UBERON:0000065,2.59e-12,41;UBERON:0001004,7.84e-12,42;UBERON:0007811,1.65e-11,36;UBERON:0004177,2.63e-10,29;UBERON:0005057,2.63e-10,29;UBERON:0000153,2.28e-09,43;UBERON:0002390,3.52e-09,45;UBERON:0003061,3.52e-09,45;UBERON:0002193,3.58e-08,48;UBERON:0002405,3.58e-08,48;UBERON:0000077,1.36e-07,35;UBERON:0000926,2.73e-07,120;UBERON:0004120,2.73e-07,120;UBERON:0006603,2.73e-07,120;UBERON:0001048,3.40e-07,134;UBERON:0002368,5.13e-07,60 | |||
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| |||
|short_description=p6@Galnt1 | |||
}} |
Latest revision as of 02:50, 27 September 2015
Short description: | p6@Galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Galnt1_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENSMUST00000170243_5end |
EntrezGene: | Galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.52e-14 | 23 |
neck | 1.52e-14 | 23 |
respiratory system epithelium | 1.52e-14 | 23 |
hemolymphoid system gland | 1.52e-14 | 23 |
pharyngeal epithelium | 1.52e-14 | 23 |
thymic region | 1.52e-14 | 23 |
pharyngeal gland | 1.52e-14 | 23 |
entire pharyngeal arch endoderm | 1.52e-14 | 23 |
thymus primordium | 1.52e-14 | 23 |
early pharyngeal endoderm | 1.52e-14 | 23 |
pharynx | 1.10e-13 | 24 |
gland of gut | 1.10e-13 | 24 |
upper respiratory tract | 1.10e-13 | 24 |
chordate pharynx | 1.10e-13 | 24 |
pharyngeal arch system | 1.10e-13 | 24 |
pharyngeal region of foregut | 1.10e-13 | 24 |
segment of respiratory tract | 1.25e-12 | 27 |
respiratory tract | 2.59e-12 | 41 |
respiratory system | 7.84e-12 | 42 |
craniocervical region | 1.65e-11 | 36 |
hemopoietic organ | 2.63e-10 | 29 |
immune organ | 2.63e-10 | 29 |
anterior region of body | 2.28e-09 | 43 |
hematopoietic system | 3.52e-09 | 45 |
blood island | 3.52e-09 | 45 |
hemolymphoid system | 3.58e-08 | 48 |
immune system | 3.58e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 1.36e-07 | 35 |
mesoderm | 2.73e-07 | 120 |
mesoderm-derived structure | 2.73e-07 | 120 |
presumptive mesoderm | 2.73e-07 | 120 |
primordium | 3.40e-07 | 134 |
endocrine gland | 5.13e-07 | 60 |