FFCP PHASE1:Mm9::chr18:3337339..3337397,-: Difference between revisions
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{{FFCP|EntrezGene=12916|HGNC=|MCL_coexpression_id=363|UniProt=P27699|association_with_transcript=88bp_to_ENSMUST00000154135_5end|description=CAGE_peak_5_at_Crem_5end|id=chr18:3337339..3337397,-|ontology_enrichment_celltype=CL:0000063!9.70e-16!66;CL:0000144!4.14e-15!121;CL:0000012!4.14e-15!121;CL:0002371!1.25e-13!118;CL:0000723!2.37e-12!91;CL:0000048!2.37e-12!91;CL:0000219!3.58e-12!54;CL:0000548!3.96e-12!115;CL:0000004!3.96e-12!115;CL:0000255!3.96e-12!115;CL:0002320!4.05e-12!46;CL:0000134!4.05e-12!46;CL:0000034!6.22e-12!97;CL:0000988!3.07e-09!32;CL:0002032!3.07e-09!32;CL:0000037!3.07e-09!32;CL:0000566!3.07e-09!32;CL:0000837!3.07e-09!32;CL:0002031!2.15e-08!25;CL:0000838!8.46e-08!12;CL:0000084!3.51e-07!11;CL:0000827!3.51e-07!11|ontology_enrichment_celltype_v019_2=CL:0002320,2.53e-14,46;CL:0000134,2.53e-14,46;CL:0000219,6.24e-14,54;CL:0000034,1.09e-13,97;CL:0000723,2.53e-13,91;CL:0000048,2.53e-13,91;CL:0000988,7.10e-11,32;CL:0002032,7.10e-11,32;CL:0000037,7.10e-11,32;CL:0000837,7.10e-11,32;CL:0002031,6.10e-10,25;CL:0000838,6.63e-09,12;CL:0000084,3.53e-08,11;CL:0000827,3.53e-08,11;CL:0000542,8.94e-08,13;CL:0000051,8.94e-08,13;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000738,2.15e-07,17;CL:0002087,2.15e-07,17;CL:0000624,6.22e-07,8;CL:0000066,7.63e-07,25;CL:0000223,7.95e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.05e-12!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-14,46|phase1_expression=3.84357233051505,2.44282785347553,1.36499771816861,4.53696316960245,6.51164448930251,1.17515490338323,0.700837921786577,17.5607719880544,13.7972947708633,13.1076134740316,2.22583358693156,2.87179772383211,11.8128503652532,10.5778686926987,1.33243904726265,2.22722794128809,0.699561878128147,4.41647031501533,3.97631857456642,2.54633791078818,7.65389611359628,1.58865521921416,2.35079810225042,0.47997726838022,1.14704640533585,0.57423196411502,0.86152399231815,1.50829862880122,1.33016393619462,0.504060259519861,0.886922042621219,8.25539875497521,4.30545351309199,0,3.17736781726402,2.32728503501889,3.06254034393554,13.393012183581,6.2506827561904,7.85285615960697,48.8232135065742,16.3930916390027,6.311634589405,0.629484089877886,0.709638518536602,0.734187008646726,3.12956537739216,0.218025156380447,1.5378032791413,1.94429899074283,1.39986421625363,1.43752564364972,10.5703041816374,19.5847778343063,8.06625117941913,0.771778308107841,1.14613375975503,2.57836046138721,1.21389876515759,2.64495489636016,3.1691570175309,1.69422266034566,0.889294796111139,1.7997994345628,0,1.4209602298922,1.49800055259202,1.53687322128622,1.45165457231869,1.35005938331691,0.841299845405528,0.571301968807607,0.441737081903227,1.10241719293459,0.575072826109418,0,1.10115880999389,0.510749352340751,1.53606533256243,0.923204014111357,1.18933936683133,1.04182674111352,1.95428099300967,1.12552522006336,0.916789486660861,1.47314292736834,0.284743361598206,1.4911955666024,0.984440513331393,0.755715601067855,10.4351215932604,6.0229671388697,3.39985666853875,1.61910957491345,3.24888208723835,1.79210754838934,1.68533304158102,2.04516387093669,2.85764605063156,1.41335829804136,4.3661460130771,1.28326477414318,2.54805239706646,0,1.73192832808971,2.53359865475099,2.02209778005913,2.51204535381932,0.517875767294343,2.3750742250372,0.693941307064543,0.304465478312141,0.461230994512117,1.80867168663147,1.17588707135705,1.38233250462643,1.97755974187499,1.59059292611903,1.76922110389975,0.647067399789637,1.32504911076236,0.969750506270444,1.86391761218122,1.17112318804619,0.83778682725382,0.255457055208591,2.99537811264801,3.59941638596045,3.43089613097275,0.748953197024114,1.37250180845588,0.879580464790051,0.347648640384553,2.30143911597297,0.83115217823824,1.62241263067758,0.509196819251581,1.36847667671102,2.27450482590307,1.05220927943237,0.650602214813519,0.689706313300419,0.540186389416048,0.452114453507145,1.15662048557257,0.512454881139399,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0.702213187313235,1.80143534980301,2.84163499395593,0.207125772535502,0,0.180062061461015,0.946978942340841,0.196764231747404,0.462801338662135,0.232533944750408,0.804820204198858,0.583826711835847,0.16455984991348,0.656669856316381,1.05389452409612,1.31579988682799,1.09775057645525,1.07365135008297,1.26173969138476,1.13195073617213,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.902072229254653,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.948339504765408,0.685491075658373,0,1.01825663922657,0.775809948670503,0.561086559122548,0.885311519739602,0.590440591918409,0.784993639206874,1.1105744752962,1.1858105083486,0.166845105716094,0.786235980452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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12916 | |||
|HGNC= | |||
|MCL_coexpression_id=363 | |||
|TSSclassifier=NA | |||
|UniProt=P27699 | |||
|association_with_transcript=88bp_to_ENSMUST00000154135_5end | |||
|cluster_id=chr18:3337339..3337397,- | |||
|description=CAGE_peak_5_at_Crem_5end | |||
|id=chr18:3337339..3337397,- | |||
|ontology_enrichment_celltype=CL:0000063!9.70e-16!66;CL:0000144!4.14e-15!121;CL:0000012!4.14e-15!121;CL:0002371!1.25e-13!118;CL:0000723!2.37e-12!91;CL:0000048!2.37e-12!91;CL:0000219!3.58e-12!54;CL:0000548!3.96e-12!115;CL:0000004!3.96e-12!115;CL:0000255!3.96e-12!115;CL:0002320!4.05e-12!46;CL:0000134!4.05e-12!46;CL:0000034!6.22e-12!97;CL:0000988!3.07e-09!32;CL:0002032!3.07e-09!32;CL:0000037!3.07e-09!32;CL:0000566!3.07e-09!32;CL:0000837!3.07e-09!32;CL:0002031!2.15e-08!25;CL:0000838!8.46e-08!12;CL:0000084!3.51e-07!11;CL:0000827!3.51e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.53e-14,46;CL:0000134,2.53e-14,46;CL:0000219,6.24e-14,54;CL:0000034,1.09e-13,97;CL:0000723,2.53e-13,91;CL:0000048,2.53e-13,91;CL:0000988,7.10e-11,32;CL:0002032,7.10e-11,32;CL:0000037,7.10e-11,32;CL:0000837,7.10e-11,32;CL:0002031,6.10e-10,25;CL:0000838,6.63e-09,12;CL:0000084,3.53e-08,11;CL:0000827,3.53e-08,11;CL:0000542,8.94e-08,13;CL:0000051,8.94e-08,13;CL:0000791,1.23e-07,9;CL:0000789,1.23e-07,9;CL:0002420,1.23e-07,9;CL:0002419,1.23e-07,9;CL:0000790,1.23e-07,9;CL:0000738,2.15e-07,17;CL:0002087,2.15e-07,17;CL:0000624,6.22e-07,8;CL:0000066,7.63e-07,25;CL:0000223,7.95e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.05e-12!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.53e-14,46 | |||
|phase1_expression=3.84357233051505,2.44282785347553,1.36499771816861,4.53696316960245,6.51164448930251,1.17515490338323,0.700837921786577,17.5607719880544,13.7972947708633,13.1076134740316,2.22583358693156,2.87179772383211,11.8128503652532,10.5778686926987,1.33243904726265,2.22722794128809,0.699561878128147,4.41647031501533,3.97631857456642,2.54633791078818,7.65389611359628,1.58865521921416,2.35079810225042,0.47997726838022,1.14704640533585,0.57423196411502,0.86152399231815,1.50829862880122,1.33016393619462,0.504060259519861,0.886922042621219,8.25539875497521,4.30545351309199,0,3.17736781726402,2.32728503501889,3.06254034393554,13.393012183581,6.2506827561904,7.85285615960697,48.8232135065742,16.3930916390027,6.311634589405,0.629484089877886,0.709638518536602,0.734187008646726,3.12956537739216,0.218025156380447,1.5378032791413,1.94429899074283,1.39986421625363,1.43752564364972,10.5703041816374,19.5847778343063,8.06625117941913,0.771778308107841,1.14613375975503,2.57836046138721,1.21389876515759,2.64495489636016,3.1691570175309,1.69422266034566,0.889294796111139,1.7997994345628,0,1.4209602298922,1.49800055259202,1.53687322128622,1.45165457231869,1.35005938331691,0.841299845405528,0.571301968807607,0.441737081903227,1.10241719293459,0.575072826109418,0,1.10115880999389,0.510749352340751,1.53606533256243,0.923204014111357,1.18933936683133,1.04182674111352,1.95428099300967,1.12552522006336,0.916789486660861,1.47314292736834,0.284743361598206,1.4911955666024,0.984440513331393,0.755715601067855,10.4351215932604,6.0229671388697,3.39985666853875,1.61910957491345,3.24888208723835,1.79210754838934,1.68533304158102,2.04516387093669,2.85764605063156,1.41335829804136,4.3661460130771,1.28326477414318,2.54805239706646,0,1.73192832808971,2.53359865475099,2.02209778005913,2.51204535381932,0.517875767294343,2.3750742250372,0.693941307064543,0.304465478312141,0.461230994512117,1.80867168663147,1.17588707135705,1.38233250462643,1.97755974187499,1.59059292611903,1.76922110389975,0.647067399789637,1.32504911076236,0.969750506270444,1.86391761218122,1.17112318804619,0.83778682725382,0.255457055208591,2.99537811264801,3.59941638596045,3.43089613097275,0.748953197024114,1.37250180845588,0.879580464790051,0.347648640384553,2.30143911597297,0.83115217823824,1.62241263067758,0.509196819251581,1.36847667671102,2.27450482590307,1.05220927943237,0.650602214813519,0.689706313300419,0.540186389416048,0.452114453507145,1.15662048557257,0.512454881139399,0.562210347358373,1.03481348295606,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0.702213187313235,1.80143534980301,2.84163499395593,0.207125772535502,0,0.180062061461015,0.946978942340841,0.196764231747404,0.462801338662135,0.232533944750408,0.804820204198858,0.583826711835847,0.16455984991348,0.656669856316381,1.05389452409612,1.31579988682799,1.09775057645525,1.07365135008297,1.26173969138476,1.13195073617213,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.902072229254653,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.948339504765408,0.685491075658373,0,1.01825663922657,0.775809948670503,0.561086559122548,0.885311519739602,0.590440591918409,0.784993639206874,1.1105744752962,1.1858105083486,0.166845105716094,0.786235980452812,0.674586337154561,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.324270453550071,0,0,0.744281895337007,0.312037673114561,1.26289438973556,0.179397413521912,3.85954817090694,0.923765950833023,0.757965647081939,0,0.339490171550376,0.938760993154008,0.837531287209079,1.19021820443007,1.36593553500459,1.10344600874334,0.8858587585951,1.2756381492599,2.13022309130459,1.55416483679306,1.3018415272336,1.50791283939272,0.54390568381871,0.983528546038072,1.65562047782839,1.12385412991454,1.40654023910644,0.327869890753351,1.76729649043061,0.94652465824877,1.17131623288992,1.29254038639679,1.43381278771531,0.445597348164788,1.98153571552183,0.809621403349789,0.292255857911312,1.58115111178609,1.28528526568723,1.27746076687442,0.890328018336276,1.46598263418218,1.81467135269789,1.32745138339963,1.45668381692989,0.906970670894253,0.188605079755898,1.18120757152309,0.307435147943927,0.775284879504663,1.09060118843252,1.42598951353889,0.948110273807448,0,1.03135543248187,12.9367050186439,0.720244376125241,0.517434735131018,0.643011105094777,0.354680467284547,2.14042581122485,1.48094118541909,3.65357938937519,1.17335854031855,0.63549621259146,0.882113592219848,0.65954501176592,0.807322133479528,0.542816324353403,0.358117032009409,0.328281799490123,0.582961673259701,0.741701208042039,1.87957968877638,1.23832120777933,1.29636169158798,0.753473828018764,1.23024804948923,1.83022538565218,4.07948231985253,6.15786390224095,5.38979897837253,0,0.474503990371703,1.21991680276109,0.216010681643603,1.4636180721012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| |||
|short_description=p5@Crem | |||
}} |
Latest revision as of 03:53, 27 September 2015
Short description: | p5@Crem |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Crem_5end |
Coexpression cluster: | MCL_coexpression_mm9:363 |
Association with transcript: | 88bp_to_ENSMUST00000154135_5end |
EntrezGene: | Crem |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.53e-14 | 46 |
mesenchymal cell | 2.53e-14 | 46 |
motile cell | 6.24e-14 | 54 |
stem cell | 1.09e-13 | 97 |
somatic stem cell | 2.53e-13 | 91 |
multi fate stem cell | 2.53e-13 | 91 |
hematopoietic cell | 7.10e-11 | 32 |
hematopoietic oligopotent progenitor cell | 7.10e-11 | 32 |
hematopoietic stem cell | 7.10e-11 | 32 |
hematopoietic multipotent progenitor cell | 7.10e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 6.10e-10 | 25 |
lymphoid lineage restricted progenitor cell | 6.63e-09 | 12 |
T cell | 3.53e-08 | 11 |
pro-T cell | 3.53e-08 | 11 |
lymphocyte | 8.94e-08 | 13 |
common lymphoid progenitor | 8.94e-08 | 13 |
mature alpha-beta T cell | 1.23e-07 | 9 |
alpha-beta T cell | 1.23e-07 | 9 |
immature T cell | 1.23e-07 | 9 |
mature T cell | 1.23e-07 | 9 |
immature alpha-beta T cell | 1.23e-07 | 9 |
leukocyte | 2.15e-07 | 17 |
nongranular leukocyte | 2.15e-07 | 17 |
CD4-positive, alpha-beta T cell | 6.22e-07 | 8 |
epithelial cell | 7.63e-07 | 25 |
endodermal cell | 7.95e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.53e-14 | 46 |